BAC Information

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BAC

Clone NameB6Ng01-146P19
Chromosome5 (Build37)
Map Location 146,729,888 - 146,731,000
singlet/doubletsinglet
Overlap genenone
Upstream geneAW146299, EG231885, EG666992, 1700018F24Rik, Arpc1a, Arpc1b, Pdap1, Bud31, Ptcd1, Cpsf4, Atp5j2, Zkscan14, Zkscan5, EG622116, Zfp655, LOC677270, EG666311, EG622127, LOC100039566, Cyp3a16, LOC100041375, LOC667065, Cyp3a41, Cyp3a44, Cyp3a11
Downstream geneCyp3a25, LOC667098, LOC667104, LOC100041449, LOC433961, EG622306, 1700001J03Rik, LOC667121, Rnf6, Cdk8, Wasf3, LOC623198, LOC622924, 4930449I24Rik, LOC100041548, LOC100041554, LOC100041566, LOC100041578, EG667172, Gpr12, Usp12, 1700041I07Rik, Rpl21, Rasl11a, LOC100039699, LOC627218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146P19.bB6Ng01-146P19.g
ACCDH943989DH943990
length1,0331,120
definitionDH943989|Mus musculus domesticus DNA, BAC clone: B6Ng01-146P19, 5' end.DH943990|Mus musculus domesticus DNA, BAC clone: B6Ng01-146P19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctacattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctcc
gaaaattggacatagtactactggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaagacacatgctccactat
gtccatagcagccttatttataagagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactaagctattaaaaagagtgaattcacgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattaacccagaacc
ttagtatagcaagatataaggtacaatatgtaaaacatatgaaactgaag
aaaaacaaaggccaaagtgtggacacttttgcttcattttttgaattgga
aacaatcacccatggaaggagttacagtgacaaagtttgggaggtgagac
aaaaggatggtccctctagagaccaccatatccagggatccatcctataa
ttagccttccaagcaatgacacattgcatacactagcaagcctttgctgc
aaggacagtgatatagctgtccccttgtgagactaggccaagggcttagc
aatcatataagtggaatgctctcagttcactattggtattggaatcacag
ggcccccattggtaggagcttgataaagtatccaagtgagctatagaggt
tctgctaccctacttggagggaccaaccatttt
gaattcccatatgatgggcaatttcccagtgtgtgcataaggttttgaat
tgagagctagtgatggctgggccattatcagtttataatttgttgaggaa
tgcccatgatggcaaaggtggagagcatatgatgaatcaatctttttgag
ttttcactgtttgggctgtagcccatgtaaagtgcaagtatttatctatg
gtgacaaaaacatatttctgtctaccgaattagggaatatgggtgacgca
ggtgtagggcttctctcagaagtgtgtcctgagatgcaccagcagatgct
gcctccagctgaagcccttccagcagtctgagcacttgttgaacttctgc
ccaatgtggttgtgctggtgcaactccacgtgatgactctggctgaaggt
cttccaacactcgccacacacataggacctcttgcccaggtgagtcctct
gatgcttggtgaggtattccccagggtgaaacatttcccacattccacac
agccaaaggatttcttttcttcgtgggtccactggtgcctaacaaggttg
gaacactgacttttccgcactcagggcactggaaaggtgtacagaaagaa
ttgtgggcattgagggcagcaagcaaggggatcccatgctgaggagcagg
aagcccaggaagactggactcagagctcccaggctcctgctcaaagttgc
acccaggtccaggaatctggatagtggcttctccaaagccatcgaaatca
acccaacaaacgctctcttaaggtctttctgctggggcttagcctccttc
tccttactcccagaacctgtgtgacaaaaggagatcattactgtggtgat
gttccatcacacctccaattgctgctctccatgcccagaaaaccaggcat
caccccagatcttctgtactttgttttctctgccagctctaggacagtgg
ttctcaacctttcctaatgcttgttgcccctttaatccaattccttataa
tgtggtgaccctagacctaaaattattcaattgattattcttaactatat
ttggctgaaaagaagaacttagactgcagataagatgatgagccagacaa
attttctgaatcaaggcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_146729888_146731000
seq2: B6Ng01-146P19.g_68_1187

seq1  GAATTCCCATATGATGGGCAATTTCCCAGTGTGTGCATAAGGTTTTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATATGATGGGCAATTTCCCAGTGTGTGCATAAGGTTTTGAAT  50

seq1  TGAGAGCTAGTGATGGCTGGGCCATTATCAGTTTATAATTTGTTGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCTAGTGATGGCTGGGCCATTATCAGTTTATAATTTGTTGAGGAA  100

seq1  TGCCCATGATGGCAAAGGTGGAGAGCATATGATGAATCAATCTTTTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGATGGCAAAGGTGGAGAGCATATGATGAATCAATCTTTTTGAG  150

seq1  TTTTCACTGTTTGGGCTGTAGCCCATGTAAAGTGCAAGTATTTATCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTGTTTGGGCTGTAGCCCATGTAAAGTGCAAGTATTTATCTATG  200

seq1  GTGACAAAAACATATTTCTGTCTACCGAATTAGGGAATATGGGTGACGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAAAACATATTTCTGTCTACCGAATTAGGGAATATGGGTGACGCA  250

seq1  GGTGTAGGGCTTCTCTCAGAAGTGTGTCCTGAGATGCACCAGCAGATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGGGCTTCTCTCAGAAGTGTGTCCTGAGATGCACCAGCAGATGCT  300

seq1  GCCTCCAGCTGAAGCCCTTCCAGCAGTCTGAGCACTTGTTGAACTTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGCTGAAGCCCTTCCAGCAGTCTGAGCACTTGTTGAACTTCTGC  350

seq1  CCAATGTGGTTGTGCTGGTGCAACTCCACGTGATGACTCTGGCTGAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTGGTTGTGCTGGTGCAACTCCACGTGATGACTCTGGCTGAAGGT  400

seq1  CTTCCAACACTCGCCACACACATAGGACCTCTTGCCCAGGTGAGTCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAACACTCGCCACACACATAGGACCTCTTGCCCAGGTGAGTCCTCT  450

seq1  GATGCTTGGTGAGGTATTCCCCAGGGTGAAACATTTCCCACATTCCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTGGTGAGGTATTCCCCAGGGTGAAACATTTCCCACATTCCACAC  500

seq1  AGCCAAAGGATTTCTTTTCTTCGTGGGTCCACTGGTGCCTAACAAGGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAGGATTTCTTTTCTTCGTGGGTCCACTGGTGCCTAACAAGGTTG  550

seq1  GAACACTGACTTTTCCGCACTCAGGGCACTGGAAAGGTGTACAGAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGACTTTTCCGCACTCAGGGCACTGGAAAGGTGTACAGAAAGAA  600

seq1  TTGTGGGCATTGAGGGCAGCAAGCAAGGGGATCCCATGCTGAGGAGCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGCATTGAGGGCAGCAAGCAAGGGGATCCCATGCTGAGGAGCAGG  650

seq1  AAGCCCAGGAAGACTGGACTCAGAGCTCCCAGGCTCCTGCTCAAAGTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAGGAAGACTGGACTCAGAGCTCCCAGGCTCCTGCTCAAAGTTGC  700

seq1  ACCCAGGTCCAGGAATCTGGATAGTGGCTTCTCCAAAGCCATCGAAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTCCAGGAATCTGGATAGTGGCTTCTCCAAAGCCATCGAAATCA  750

seq1  ACCCAACAAACGCTCTCTTAAGGTCTTTCTGCTGGGGCTTAGCCTCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACAAACGCTCTCTTAAGGTCTTTCTGCTGGGGCTTAGCCTCCTTC  800

seq1  TCCTTACTCCCAGAACCTGTGTGAC-AAAGGAGATCATTACTGTGGTGAT  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCCTTACTCCCAGAACCTGTGTGACAAAAGGAGATCATTACTGTGGTGAT  850

seq1  GTTCCATCACACCTCCAATTGCTGCTCTCCATGCCCAG-AAACCAGGCAT  898
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTTCCATCACACCTCCAATTGCTGCTCTCCATGCCCAGAAAACCAGGCAT  900

seq1  CA-CCCAGATC-TCTGTACTT--GTTTCTCTGCCAGCTCTAGGACAGTGG  944
      || |||||||| |||||||||   ||||||||||||||||||||||||||
seq2  CACCCCAGATCTTCTGTACTTTGTTTTCTCTGCCAGCTCTAGGACAGTGG  950

seq1  TTCTCAACC-TTCCTAATGCT--GTGCCCCTTTAATCCAATTCCTAAT-A  990
      ||||||||| |||||||||||   ||||||||||||||||||||| || |
seq2  TTCTCAACCTTTCCTAATGCTTGTTGCCCCTTTAATCCAATTCCTTATAA  1000

seq1  TGTGGTGACCCCTAGACACAAAATTATTTCATTGATATTTCATAACTATA  1040
      |||||||| ||||||||  |||||||||  ||||||  ||| ||||||| 
seq2  TGTGGTGA-CCCTAGACCTAAAATTATTCAATTGATTATTCTTAACTAT-  1048

seq1  ATTTTGCTG-AAAGA--GACTTAGACTGCAAGAAAAGAATGATGAAGCCA  1087
      |||| |||| |||||   ||||||||||| ||| ||| |||||| |||| 
seq2  ATTTGGCTGAAAAGAAGAACTTAGACTGC-AGATAAG-ATGATG-AGCC-  1094

seq1  AGACAAATTTTTCTG-ATCAAGGCCTG  1113
      ||||||| ||||||| |||||||||||
seq2  AGACAAA-TTTTCTGAATCAAGGCCTG  1120