BAC Information

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BAC

Clone NameB6Ng01-147E08
Chromosome5 (Build37)
Map Location 8,554,483 - 8,555,051
singlet/doubletsinglet
Overlap geneGm440
Upstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40
Downstream geneAbcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1, LOC654361, 9330182L06Rik, Grm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147E08.bB6Ng01-147E08.g
ACCDH944197DH944198
length1,254696
definitionDH944197|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E08, 5' end.DH944198|Mus musculus domesticus DNA, BAC clone: B6Ng01-147E08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagccagc
gtactgttcaacctcccggcagtcggtttcaaggtccgccctatgcggag
cccccaccctgcgtagtgcgtcagcaatgcgcagagagatgcgcagagag
gcaatgcgcatagagatgcgcatagaggcaatgcgcatagagatgcgcag
agaggcaatgcgcagagaggcagtgcgcagagaggcagtgcgcatactca
ttcattcccagagaggaacaaaggaaaatacaacaggcatttccagtctt
tgaaggagccgagggtgggcgtgtccacgctccggtagaatacgtacaga
ttaaagaactcgccgagtcggtccgtaaatacggaaccaatgctaatttt
accttggtgcagttagacaggctcgccggcatggcactaactcctgctga
ctggcaaacgattgtaaaagccgctctccctagtatgggcaaatatatgg
aatggagagcgctttggcacgaagctgcacaagcgcaggcccgagcaaac
gcaactgctttgactccagagcagagagattggacttttgacttgttaac
gggtcagggagcttattctgctgatcagacaaactaccattggggagctt
atgcccagatttcttccacggctattagggcctggaaggcgctctcccga
gcaggtgaaaccactgggcagttaacaaagataatccagggacctcagaa
tccttctcagattttgtggccagaatgacagaggcagcagagcgtatttt
tggagagtcagagcaagctgcgcctctgatagaacagctcatctatgagc
aagccacaaggagtgccgagcggtcatagccgcaagaagaacaaaggctt
acaagactggctcaggtctgtcgagagttgggggacctctcagcaatgca
ggtttagcggctggcatccttcaatcccaaaaccgctccatgggcagaaa
tatcaaaggacttgtttttactgcggaaagcctgggcattttagaagatt
gcagagtctgttaaactggagggaactcctcttggtctaagtgggcaagt
gtatctatgactgaacatgtgtcctctgtagggataggcatagtcttccc
acctgatgcatacctctatgtgccaaaacggttactcgggccctcggtcc
caca
gaattcctgatctttccaagacttttatcatgaatgtgtgttagatcttg
tcaaatgctttctctacatctaaggagatgatcatgtggtttttgtcttt
gagtttgtttatataatggatgacattgatggatttccgtatattaaacc
atcccttcatccctggaataaaacctacttggttaggatggatgattgtt
ttaatgtgttcttgtattcggttagcgagaatattattgagtatgtttgc
atcgatattcataagggaaattggtctgaagttctctatccttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagttccctctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctggtagaacgctacactaaacccatctg
gtcctgggctttttttggctgggagactattaatggctgcttctatttct
ttaggtgatatgggactgtttagatcattaacttgatcctgatttaaatt
tggtacctggtatctgtttagaaatttgtccaattttttctaggttttcc
agttttgttgagtatatccttttgtagaggatctgatagtgttttgcatt
tcttaaggatctgttgtatgtctcccttttcatttctgattttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_8554483_8555051
seq2: B6Ng01-147E08.g_197_764 (reverse)

seq1  AACAAAATCAGAACTGAAAAGGGAGACATAACAACAGATCCTGAAGAAAT  50
      ||||||||||||| ||||||||||||||| |||||||||||| |||||||
seq2  AACAAAATCAGAAATGAAAAGGGAGACAT-ACAACAGATCCTTAAGAAAT  49

seq1  CCAAAACACTATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGG  100
       |||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  GCAAAACACTATCAGATCC-TCTACAAAAGGATATACTCAACAAAACTGG  98

seq1  AAAACCTGGACGAAA-TGGACAAATTTCTGGACAGATACCAGGTACCAAA  149
      ||||||| ||  ||| |||||||||||||  |||||||||||||||||||
seq2  AAAACCTAGAAAAAATTGGACAAATTTCTAAACAGATACCAGGTACCAAA  148

seq1  GTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAG  199
       || ||||||||||||||| |   |||||||||||||||||| |||||||
seq2  TTTAAATCAGGATCAAGTTAATGATCTAAACAGTCCCATATCACCTAAAG  198

seq1  AAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCA  249
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAGCAGCCATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCA  248

seq1  GACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCC  299
      || |||||||||| || |||||| |||||||||||||||||||||| |||
seq2  GATGGGTTTAGTGTAGCGTTCTACCAGACCTTCAAAGAAGATCTAATTCC  298

seq1  AGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCA  349
      ||||||||||||||| || ||||| ||||||||||| || | ||||||||
seq2  AGTTCTGCACAAACTATTCCACAAAATAGAAGTAGAGGGAACTCTACCCA  348

seq1  ACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGAT  399
      ||||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  ACTCATTCTATGAAGCCACAATTACTCTGATACCTAAACCACAGAAAGAT  398

seq1  CCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGC  449
      ||||||| |||||||||||||||||||||||| |||||||| ||||||||
seq2  CCAACAAGGATAGAGAACTTCAGACCAATTTCCCTTATGAATATCGATGC  448

seq1  AAAAATTCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAG  499
      ||| || || ||||| ||||||||||||||||| ||||||||||||||| 
seq2  AAACATACTCAATAATATTCTCGCTAACCGAATACAAGAACACATTAAAA  498

seq1  CAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGG  549
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  CAATCATCCATCCTAACCAAGTAGGTTTTATTCCAGGGATGAAGGGATGG  548

seq1  TTTAATATACGAAAATCCAT  569
      ||||||||||| ||||||||
seq2  TTTAATATACGGAAATCCAT  568