BAC Information

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BAC

Clone NameB6Ng01-147L22
Chromosome5 (Build37)
Map Location 73,474,154 - 73,475,194
singlet/doubletsinglet
Overlap geneFryl
Upstream geneGabrb1, Commd8, Atp10d, Corin, Nfxl1, Zar1, EG545758, Cnga1, LOC384275, Npal1, Txk, Tec, Slain2, Slc10a4, LOC667127
Downstream geneOciad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18, Usp46
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147L22.bB6Ng01-147L22.g
ACCDH944538DH944539
length1,0411,060
definitionDH944538|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L22, 5' end.DH944539|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctccgtgtagcgtgcttttctggctgtgtagtattctagagtct
gtgcgtcacagttggttgtccgcttctttcctccgtcagccatttcagtt
gcttctatgttgttatgaatacgggtgtgcaagtgttgctttgagtctcg
gttttgaattgttttagatatacgctcaacagctggatcagtctgatggt
agagtgattctctaactttctgaggagccgccatgctgatcttcatacaa
gtactcagcatcttataatcttgccgagagcctggagacatttattcaac
tgccaactgcattttgtatttaaaaaaataaaacaaacaaaaaaactaag
catggctggtcagggtggcacacatctgtacacatctgcagtcccagtgc
ttgggaaagtgaagtacaaggccagcctgggctacatagagagtaactgt
gtgagaagagaaaagagatgctttgtgttagctgggaagtgattggcata
tgtcttcctgttggcccagaagcacgtgagatgatgttgggtctcccctt
tgatattccttgaaccagagatcagccagcggatccagacggcacacccc
gcggggcggcaggccatgcttcattacctactgccctggatgaacaacat
cgagctggtcgacctcaaacctctgccttcagggaggcggcaggatgaag
atgaagatgactccttgaaagaccgagagctcatggtgaccagcaggcgc
tggctgagaggagaaggctggggctccccacaggccaccgccatggtgtt
gaacaatctcatgtacatgacagcgaaggtaacggggtctgtgttcatca
tgactgcacagtttggaggttgggaggaggaaccacggttagaaactgat
gctgagactgtcctgggacagacagacaaacctacagtataaactccatt
cttccattattcaagccagagaagagcagccgtccctgaagtggtctctc
ttatatgctgttttcagtacggcgatagagctggcttggtc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgttggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aagtatggtccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagttgatgctcacagtcagcttatggatggatcacagggctccca
atggatgagctagagaaagtacccaaggagcttaagggatcttcacccta
tagttggaccactttatgaactaaccagtaccctgtgcctctctgtactc
ctagctgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_73474154_73475194
seq2: B6Ng01-147L22.b_44_1084 (reverse)

seq1  GACCAGGCCAGCTC-ATCGCCGTACTGAAAACAGCATATAAGAGAGA-CA  48
      ||||| |||||||| |||||||||||||||||||||||||||||||| ||
seq2  GACCAAGCCAGCTCTATCGCCGTACTGAAAACAGCATATAAGAGAGACCA  50

seq1  CTTCAGGGACGCCTGCTCTTCTCTGGCTTGAATTAATGGAAGAATGGAGT  98
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  CTTCAGGGACGGCTGCTCTTCTCTGGCTTGAA-TAATGGAAGAATGGAGT  99

seq1  TTATACTGTAGGTTTTGTCTGTCTGTCCCAGGACAGTCTCAGCATCAGTT  148
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTATACTGTAGG-TTTGTCTGTCTGTCCCAGGACAGTCTCAGCATCAGTT  148

seq1  TCTAACCGTGGTTCCTCCTCCCAACCTCCAAACTGTGCAGTCATGATGAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCGTGGTTCCTCCTCCCAACCTCCAAACTGTGCAGTCATGATGAA  198

seq1  CACAGACCCCGTTACCTTCGCTGTCATGTACATGAGATTGTTCAACACCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACCCCGTTACCTTCGCTGTCATGTACATGAGATTGTTCAACACCA  248

seq1  TGGCGGTGGCCTGTGGGGAGCCCCAGCCTTCTCCTCTCAGCCAGCGCCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGTGGCCTGTGGGGAGCCCCAGCCTTCTCCTCTCAGCCAGCGCCTG  298

seq1  CTGGTCACCATGAGCTCTCGGTCTTTCAAGGAGTCATCTTCATCTTCATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCACCATGAGCTCTCGGTCTTTCAAGGAGTCATCTTCATCTTCATC  348

seq1  CTGCCGCCTCCCTGAAGGCAGAGGTTTGAGGTCGACCAGCTCGATGTTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGCCTCCCTGAAGGCAGAGGTTTGAGGTCGACCAGCTCGATGTTGT  398

seq1  TCATCCAGGGCAGTAGGTAATGAAGCATGGCCTGCCGCCCCGCGGGGTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAGGGCAGTAGGTAATGAAGCATGGCCTGCCGCCCCGCGGGGTGT  448

seq1  GCCGTCTGGATCCGCTGGCTGATCTCTGGTTCAAGGAATATCAAAGGGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCTGGATCCGCTGGCTGATCTCTGGTTCAAGGAATATCAAAGGGGA  498

seq1  GACCCAACATCATCTCACGTGCTTCTGGGCCAACAGGAAGACATATGCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAACATCATCTCACGTGCTTCTGGGCCAACAGGAAGACATATGCCA  548

seq1  ATCACTTCCCAGCTAACACAAAGCATCTCTTTTCTCTTCTCACACAGTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTCCCAGCTAACACAAAGCATCTCTTTTCTCTTCTCACACAGTTA  598

seq1  CTCTCTATGTAGCCCAGGCTGGCCTTGTACTTCACTTTCCCAAGCACTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTATGTAGCCCAGGCTGGCCTTGTACTTCACTTTCCCAAGCACTGG  648

seq1  GACTGCAGATGTGTACAGATGTGTGCCACCCTGACCAGCCATGCTTAGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCAGATGTGTACAGATGTGTGCCACCCTGACCAGCCATGCTTAGTT  698

seq1  TTTTTGTTTGTTTTATTTTTTTAAATACAAAATGCAGTTGGCAGTTGAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTGTTTTATTTTTTTAAATACAAAATGCAGTTGGCAGTTGAAT  748

seq1  AAATGTCTCCAGGCTCTCGGCAAGATTATAAGATGCTGAGTACTTGTATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCTCCAGGCTCTCGGCAAGATTATAAGATGCTGAGTACTTGTATG  798

seq1  AAGATCAGCATGGCGGCTCCTCAGAAAGTTAGAGAATCACTCTACCATCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAGCATGGCGGCTCCTCAGAAAGTTAGAGAATCACTCTACCATCA  848

seq1  GACTGATCCAGCTGTTGAGCGTATATCTAAAACAATTCAAAACCGAGACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGATCCAGCTGTTGAGCGTATATCTAAAACAATTCAAAACCGAGACT  898

seq1  CAAAGCAACACTTGCACACCCGTATTCATAACAACATAGAAGCAACTGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAACACTTGCACACCCGTATTCATAACAACATAGAAGCAACTGAA  948

seq1  ATGGCTGACGGAGGAAAGAAGCGGACAACCAACTGTGACGCACAGACTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGACGGAGGAAAGAAGCGGACAACCAACTGTGACGCACAGACTCT  998

seq1  AGAATACTACACAGCCAGAAAAGCACGCTACACGGAGGAATTC  1041
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACTACACAGCCAGAAAAGCACGCTACACGGAGGAATTC  1041