BAC Information

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BAC

Clone NameB6Ng01-147M18
Chromosome5 (Build37)
Map Location 118,319,395 - 118,372,472
singlet/doubletdoublet
Overlap geneNos1
Upstream geneLOC665073, Suds3, Taok3, Pebp1, LOC100042313, LOC100039359, BC023744, LOC667175, Wsb2, Rfc5, Ksr2
Downstream geneFbxo21, Tesc, Fbxw8, Hrk, Tmem118, 2410131K14Rik, LOC665162, Thrap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147M18.bB6Ng01-147M18.g
ACCDH944576DH944577
length1,176463
definitionDH944576|Mus musculus domesticus DNA, BAC clone: B6Ng01-147M18, 5' end.DH944577|Mus musculus domesticus DNA, BAC clone: B6Ng01-147M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,319,395 - 118,320,589)(118,372,004 - 118,372,472)
sequence
gaattcagcaatggcttggccaaaagtcataagcaagctgaggcttgggg
ctggcaagatggctcagcaggtaagagcactgactgctctgcccaaggtc
ctgagttcaaaccccagcaaccacatggtggctcacaaccacccataatg
agatctgatgctctcttttggtttgtctgaagtcagctacagtgtactta
gatataataataaataaatctttaaaataaaaaaagagagagagagagag
aaaggaaggatcgaaggtaggaaggaagggagaaagagagaaagcaaaag
agagaaaaaaagaaaaagaaagagagaaaggaagagaggaaaaaaagaga
gaaagaaagaaagaaaagctgcgttttaagagaaagtcactccggaaggc
ttagagccctgagaagccacccacagcaaggaatgggttctgagggacag
gcacctttctttctaaaggacatctgttcccctgacttggtggctcgtat
tcacatgacatcctgcccgccttcctagcctgaagctagtgtgtggttgg
catggcctgcccctacggtatttccctcatctcagatgttacagtcctaa
gtataagggacaatgtcagtctcctaaggagagagacagcagtcaacagt
atcagtacacctggggggacctcagcctgcagtcaaaggtgcgtgtccag
accctgaactgcaccacaccaggagcatcagatataggcagacatagctg
tgtcagcttggtgtctcaagtaccacagggatgccatcttttgtgaccca
gttttctgaaatgagcaattctgtttcaatgagacgacaggtcagtctga
cttcatttgatgtgcccgcttccgtaggctcacacctggaagaccaaaac
tatcagtatgcataagacagaactcctgcctgccatgtgggttattgaaa
ccctttgtccttagtggggcttgtccttggcatggtagggccttctgtcc
cagatggtttcacttctagccacacatgcagagcacccccaaatttcaga
gaagctacagcccacgatgtctccacccacttgacatgagcctcctggag
ctgaatcaaaccgccaacgggtgtactgatagactcgagtctcaagttca
tggctggtcagtttccactggcatcc
taataaacctctcgtggtctttgactacagcatcttcctcagacatgtga
ctcctaggctcaccagccacagatcagttgactgactcatgacaacactt
ctgaacggactcaggggcccacgccacaatcactgggagaatcagtgttt
ccatgacagttgctacttttgagtacaaagttcctattttaaacctcgaa
accaacaggtgactaagttctcatctgcagggccagatagcaaagatacc
taagatttcaaagttgaaggttccttgcagagggggtggggtgggttaga
caggaaaaaaacaaacgcctgaatatttttaatggctgaaattaaaatat
caccataataatgaagtacaattatttttggtgtgcgtgcatatgcgtat
ggaggacagatgtcaactttaagtgttgtctccccaaacagcatttgggg
ggtggggaggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_118319395_118320589
seq2: B6Ng01-147M18.b_43_1218

seq1  GAATTCAGCAATGGCTTGGCCAAAAGTCATAAGCAAGCTGAGGCTTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAATGGCTTGGCCAAAAGTCATAAGCAAGCTGAGGCTTGGGG  50

seq1  CTGGCAAGATGGCTCAGCAGGTAAGAGCACTGACTGCTCTGCCCAAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAAGATGGCTCAGCAGGTAAGAGCACTGACTGCTCTGCCCAAGGTC  100

seq1  CTGAGTTCAAACCCCAGCAACCACATGGTGGCTCACAACCACCCATAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCAAACCCCAGCAACCACATGGTGGCTCACAACCACCCATAATG  150

seq1  AGATCTGATGCTCTCTTTTGGTTTGTCTGAAGTCAGCTACAGTGTACTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGATGCTCTCTTTTGGTTTGTCTGAAGTCAGCTACAGTGTACTTA  200

seq1  GATATAATAATAAATAAATCTTTAAAATAAAAAAAGAGAGAGAGAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAATAATAAATAAATCTTTAAAATAAAAAAAGAGAGAGAGAGAGAG  250

seq1  AAAGGAAGGATCGAAGGTAGGAAGGAAGGGAGAAAGAGAGAAAGCAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGATCGAAGGTAGGAAGGAAGGGAGAAAGAGAGAAAGCAAAAG  300

seq1  AGAGAAAAAAAGAAAAAGAAAGAGAGAAAGGAAGAGAGGAAAAAAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAAAAGAAAAAGAAAGAGAGAAAGGAAGAGAGGAAAAAAAGAGA  350

seq1  GAAAGAAAGAAAGAAAAGCTGCGTTTTAAGAGAAAGTCACTCCGGAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAAGCTGCGTTTTAAGAGAAAGTCACTCCGGAAGGC  400

seq1  TTAGAGCCCTGAGAAGCCACCCACAGCAAGGAATGGGTTCTGAGGGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGCCCTGAGAAGCCACCCACAGCAAGGAATGGGTTCTGAGGGACAG  450

seq1  GCACCTTTCTTTCTAAAGGACATCTGTTCCCCTGACTTGGTGGCTCGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTTCTTTCTAAAGGACATCTGTTCCCCTGACTTGGTGGCTCGTAT  500

seq1  TCACATGACATCCTGCCCGCCTTCCTAGCCTGAAGCTAGTGTGTGGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGACATCCTGCCCGCCTTCCTAGCCTGAAGCTAGTGTGTGGTTGG  550

seq1  CATGGCCTGCCCCTACGGTATTTCCCTCATCTCAGATGTTACAGTCCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCTGCCCCTACGGTATTTCCCTCATCTCAGATGTTACAGTCCTAA  600

seq1  GTATAAGGGACAATGTCAGTCTCCTAAGGAGAGAGACAGCAGTCAACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGGGACAATGTCAGTCTCCTAAGGAGAGAGACAGCAGTCAACAGT  650

seq1  ATCAGTACACCTGGGGGGACCTCAGCCTGCAGTCAAAGGTGCGTGTCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTACACCTGGGGGGACCTCAGCCTGCAGTCAAAGGTGCGTGTCCAG  700

seq1  ACCCTGAACTGCACCACACCAGGAGCATCAGATATAGGCAGACATAGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGAACTGCACCACACCAGGAGCATCAGATATAGGCAGACATAGCTG  750

seq1  TGTCAGCTTGGTGTCTCAAGTACCACAGGGATGCCATCTTTTGTGACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCTTGGTGTCTCAAGTACCACAGGGATGCCATCTTTTGTGACCCA  800

seq1  GTTTTCTGAAATGAGCAATTCTGTTTCAATGAGACGACAGGTCAGTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGAAATGAGCAATTCTGTTTCAATGAGACGACAGGTCAGTCTGA  850

seq1  CTTCATTTGATGTGCCCGCTTCCGTAGGCTCACACCTGGAAGACCAAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTGATGTGCCCGCTTCCGTAGGCTCACACCTGGAAGACCAAAAC  900

seq1  TATCAGTATGCATAAGACAGAACTCCTGCCTGCCATGT-GGTTATTGAAA  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TATCAGTATGCATAAGACAGAACTCCTGCCTGCCATGTGGGTTATTGAAA  950

seq1  CCCTTTGTCCTTAGGTGGGGCTTGTCCTTGGCATGGTAGGGCCTTCTGTC  999
      ||||||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  CCCTTTGTCCTTA-GTGGGGCTTGTCCTTGGCATGGTAGGGCCTTCTGT-  998

seq1  CCCAGATGGTTCCACTTCCTTAGCACACA-ATGCAAGGAGCACCCCCAAA  1048
      ||||||||||| ||||||  |||| |||| |||||  |||||||||||||
seq2  CCCAGATGGTTTCACTTC--TAGC-CACACATGCA--GAGCACCCCCAAA  1043

seq1  -TTCAGAG-AGCTACAGCCCACGATGTCTCCACCCAC-TGACATGAAGCC  1095
       ||||||| |||||||||||||||||||||||||||| ||||||| ||||
seq2  TTTCAGAGAAGCTACAGCCCACGATGTCTCCACCCACTTGACATG-AGCC  1092

seq1  TCCTGAAGGCTGAAATCAAACCGCAAAACGGGTGTACTGAATTAGGAACT  1145
      ||||| | |||| |||||||||||  ||||||||||||||  |||  |||
seq2  TCCTGGA-GCTG-AATCAAACCGC-CAACGGGTGTACTGA--TAG--ACT  1135

seq1  CGAAGTCCCAAAGTCACATTGTCCTTGGGGTCAGTCTCACACTGGCATCC  1195
      || |||| |||  |||   || |     ||||||| || |||||||||||
seq2  CG-AGTCTCAAGTTCA---TGGC----TGGTCAGTTTC-CACTGGCATCC  1176

seq1: chr5_118372004_118372472
seq2: B6Ng01-147M18.g_70_538 (reverse)

seq1  GCCCCTCCCCACCCCCCAAATGCTGTTTGGGGAGACAACACTTAAAGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTCCCCACCCCCCAAATGCTGTTTGGGGAGACAACACTTAAAGTTG  50

seq1  ACATCTGTCCTCCATACGCATATGCACGCACACCAAAAATAATTGTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTCCTCCATACGCATATGCACGCACACCAAAAATAATTGTACTT  100

seq1  CATTATTATGGTGATATTTTAATTTCAGCCATTAAAAATATTCAGGCGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTATGGTGATATTTTAATTTCAGCCATTAAAAATATTCAGGCGTT  150

seq1  TGTTTTTTTCCTGTCTAACCCACCCCACCCCCTCTGCAAGGAACCTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTTCCTGTCTAACCCACCCCACCCCCTCTGCAAGGAACCTTCAA  200

seq1  CTTTGAAATCTTAGGTATCTTTGCTATCTGGCCCTGCAGATGAGAACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAATCTTAGGTATCTTTGCTATCTGGCCCTGCAGATGAGAACTTA  250

seq1  GTCACCTGTTGGTTTCGAGGTTTAAAATAGGAACTTTGTACTCAAAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTGTTGGTTTCGAGGTTTAAAATAGGAACTTTGTACTCAAAAGTA  300

seq1  GCAACTGTCATGGAAACACTGATTCTCCCAGTGATTGTGGCGTGGGCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGTCATGGAAACACTGATTCTCCCAGTGATTGTGGCGTGGGCCCC  350

seq1  TGAGTCCGTTCAGAAGTGTTGTCATGAGTCAGTCAACTGATCTGTGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCGTTCAGAAGTGTTGTCATGAGTCAGTCAACTGATCTGTGGCTG  400

seq1  GTGAGCCTAGGAGTCACATGTCTGAGGAAGATGCTGTAGTCAAAGACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCTAGGAGTCACATGTCTGAGGAAGATGCTGTAGTCAAAGACCAC  450

seq1  GAGAGGTTTATTAGAATTC  469
      |||||||||||||||||||
seq2  GAGAGGTTTATTAGAATTC  469