BAC Information

Click to search

BAC

Clone NameB6Ng01-148A13
Chromosome5 (Build37)
Map Location 125,886,699 - 126,019,016
singlet/doubletdoublet
Overlap geneDhx37, Bri3bp, Aacs, Tmem132b
Upstream geneSetd8, BC003324, LOC606492, 6330548G22Rik, 2900002H16Rik, Rpl32-ps5c, Tmed2, Ddx55, Eif2b1, Gtf2h3, 4432405B04Rik, Atp6v0a2, Atp6v0a2, Dnahc10, Ccdc92, Zfp664, 3110032G18Rik, Ncor2, Scarb1, Ubc
Downstream geneEG231736, LOC100039178, LOC665760
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148A13.bB6Ng01-148A13.g
ACCDH944748DH944749
length472630
definitionDH944748|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A13, 5' end.DH944749|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,018,539 - 126,019,016)(125,886,699 - 125,887,328)
sequence
aatcccagagcctcacatggtagaaggaaaaaacctccaagttgtcctct
gacctccacacatgcaccatatgtagcatcgcacatgatagatggataga
ttagatattaatagggagatagatagatagatagatagatagatagatag
atagatagatagatagatagataatacatggataaataaaagataaaaat
agaatataagaaattgttatttgcttactgaggtatatttttttaccttt
cgtgtgtatgagtgtttcacctatatatgcacctgtgcactacatacata
cttggtgcccaaagaggtggtgagcctctgtgtggatgctaggaatcaaa
cccaggtttgttttcaacaagtacccttaagcactgagacaatctccagt
cccaatttatagacatacatatatatatatatatatatatatatatatat
atatatatatatatatatatat
gaattcccaggattttattatccattgcaaatgtattccctattaactgg
aagtacacacctaagctggcctgttgttcagtaacaaacgctcgaatgat
cttggctcaaagatctgaacagaatctgttccccactctcctctcggaga
aggagccaggtcatttctgaatgcagccagctgtcgggaggccaggggta
ccagtaaacaatccatgggatgaggttttgcctgggcagggccacacccg
actcacatccggcttccaagcgtagtctacatatctgtgcacacaggttc
tgctgtgaagcacggggaaacaaggcaggtacagatgggggtggacagtg
actgcttccttctcttaggggagcagaatgcggaaggcttgtcctgggga
acaagggctggaagtgaggtccgcgaggtggcctacagagagcgtggagc
ggtgagctagaaaggcaaccgcacgcaggaggaatgagggctggtgtggt
ggtccaatctggagctgtagtgtttgggccgcacctgtaagagaggacct
ggaaagtgacgtgagaggactcagaaggaggaagggggcttgttgatggc
cttgatctggggttggaggaggggaggcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_126018539_126019016
seq2: B6Ng01-148A13.b_47_524 (reverse)

seq1  ATATATATATATATATATATATATATATATATATATATATATATATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATATATAT  50

seq1  ATATGTATGTCTATAAATTGGGACTGGAGATTGTCTCAGTGCTTAAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATGTCTATAAATTGGGACTGGAGATTGTCTCAGTGCTTAAGGGT  100

seq1  ACTTGTTGAAAACAAACCTGGGTTTGATTCCTAGCATCCACACAGAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTGAAAACAAACCTGGGTTTGATTCCTAGCATCCACACAGAGGCT  150

seq1  CACCACCTCTTTGGGCACCAAGTATGTATGTAGTGCACAGGTGCATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCTCTTTGGGCACCAAGTATGTATGTAGTGCACAGGTGCATATAT  200

seq1  AGGTGAAACACTCATACACACGAAAGGTAAAAAAATATACCTCAGTAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAACACTCATACACACGAAAGGTAAAAAAATATACCTCAGTAAGC  250

seq1  AAATAACAATTTCTTATATTCTATTTTTATCTTTTATTTATCCATGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACAATTTCTTATATTCTATTTTTATCTTTTATTTATCCATGTATT  300

seq1  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  350

seq1  CTATCTCCCTATTAATATCTAATCTATCCATCTATCATGTGCGATGCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCCCTATTAATATCTAATCTATCCATCTATCATGTGCGATGCTAC  400

seq1  ATATGGTGCATGTGTGGAGGTCAGAGGACAACTTGGAGGTTTTTTCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTGCATGTGTGGAGGTCAGAGGACAACTTGGAGGTTTTTTCCTTC  450

seq1  TACCATGTGAGGCTCTGGGATTGAATTC  478
      ||||||||||||||||||||||||||||
seq2  TACCATGTGAGGCTCTGGGATTGAATTC  478

seq1: chr5_125886699_125887328
seq2: B6Ng01-148A13.g_67_696

seq1  GAATTCCCAGGATTTTATTATCCATTGCAAATGTATTCCCTATTAACTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGGATTTTATTATCCATTGCAAATGTATTCCCTATTAACTGG  50

seq1  AAGTACACACCTAAGCTGGCCTGTTGTTCAGTAACAAACGCTCGAATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACACACCTAAGCTGGCCTGTTGTTCAGTAACAAACGCTCGAATGAT  100

seq1  CTTGGCTCAAAGATCTGAACAGAATCTGTTCCCCACTCTCCTCTCGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCAAAGATCTGAACAGAATCTGTTCCCCACTCTCCTCTCGGAGA  150

seq1  AGGAGCCAGGTCATTTCTGAATGCAGCCAGCTGTCGGGAGGCCAGGGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCAGGTCATTTCTGAATGCAGCCAGCTGTCGGGAGGCCAGGGGTA  200

seq1  CCAGTAAACAATCCATGGGATGAGGTTTTGCCTGGGCAGGGCCACACCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAACAATCCATGGGATGAGGTTTTGCCTGGGCAGGGCCACACCCG  250

seq1  ACTCACATCCGGCTTCCAAGCGTAGTCTACATATCTGTGCACACAGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATCCGGCTTCCAAGCGTAGTCTACATATCTGTGCACACAGGTTC  300

seq1  TGCTGTGAAGCACGGGGAAACAAGGCAGGTACAGATGGGGGTGGACAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGAAGCACGGGGAAACAAGGCAGGTACAGATGGGGGTGGACAGTG  350

seq1  ACTGCTTCCTTCTCTTAGGGGAGCAGAATGCGGAAGGCTTGTCCTGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTCCTTCTCTTAGGGGAGCAGAATGCGGAAGGCTTGTCCTGGGGA  400

seq1  ACAAGGGCTGGAAGTGAGGTCCGCGAGGTGGCCTACAGAGAGCGTGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGCTGGAAGTGAGGTCCGCGAGGTGGCCTACAGAGAGCGTGGAGC  450

seq1  GGTGAGCTAGAAAGGCAACCGCACGCAGGAGGAATGAGGGCTGGTGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGCTAGAAAGGCAACCGCACGCAGGAGGAATGAGGGCTGGTGTGGT  500

seq1  GGTCCAATCTGGAGCTGTAGTGTTTGGGCCGCACCTGTAAGAGAGGACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAATCTGGAGCTGTAGTGTTTGGGCCGCACCTGTAAGAGAGGACCT  550

seq1  GGAAAGTGACGTGAGAGGACTCAGAAGGAGGAAGGGGGCTTGTTGATGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTGACGTGAGAGGACTCAGAAGGAGGAAGGGGGCTTGTTGATGGC  600

seq1  CTTGATCTGGGGTTGGAGGAGGGGAGGCGG  630
      ||||||||||||||||||||||||||||||
seq2  CTTGATCTGGGGTTGGAGGAGGGGAGGCGG  630