BAC Information

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BAC

Clone NameB6Ng01-148L14
Chromosome5 (Build37)
Map Location 15,139,198 - 15,144,216
singlet/doubletdoublet
Overlap genenone
Upstream geneSema3e, Pclo, ENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d
Downstream gene4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1, LOC668121, Hgf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148L14.bB6Ng01-148L14.g
ACCDH945253DH945254
length8941,024
definitionDH945253|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L14, 5' end.DH945254|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,143,689 - 15,144,216)(15,139,198 - 15,140,068)
sequence
gaattcctgatttttccaagaattttaacatgaaggggtgttaaatttta
tcaaattatttctcagaatctaatgagatgatcatgtggtctttgttttt
cagtggatttctgtatgttgaattatctctgcatttcttggatgaagcct
acttgattgtggtaaatgatcattttgatgtgttcttggatttggtttgc
aagaattttattgagttttttttttgcattgatattcataagcaaaaatg
ttctgaagttctctttctttgttgagtctttgtgtgtttaggtataagtg
caactgtggcttcatagaacaaattgggtagcgttccttctgtttctatt
ttgtgggatagtttgaagagtattgggattaggtcttctttgaaggtctg
atagaattctgcactaaacccatctagtcctgggctttgtttggttggga
gacttttaatgactgcttctatttctttggcagttatgggagtgttagac
tgtttatctaatcctggtttcattttggtacctagtgtctgtctagaaaa
ttgtccatttcatccaattttttcagtattgttgagtatagtcttttgta
ataggaaattatgatttttgaatattctgtttattctgttgttatttctc
ccttttcaattctgattttgttaatttggatactgtctctttgccctctg
gttaatctggctaagggattatctatttgtgtttgctttctcaaagaacc
agcttcccggtttttttgatttctttgtttagttctttttgtttctactg
ggttgatttcagctctgtatttgattattttcctgacatctactcctctt
cgggtatgttgggaacaaaatacatgaaagggggggggggggtc
gaattccaagtcctccaaattcagaaagagagttaccaggttgacggctt
gccagggcacatcttgtgtggttgttgcaaagagttatgtaaatacaaca
gcaacaacatatgctcaaatgagggtaaaatagttttagaatccatgtga
attcaatgaacatttatcatgatttcaattttattgttcagaattaatgt
tcaaaaattaagtgattatctgatgttatttttatgaaacatgttggcat
ttgttgacaatgatgaattgaaccatctctcttattaaatttcaacaatt
caaatgcaagttttatcacttattaatttatttgtctagtagcactaacc
agctaaaattaattttaaaaatctttttcacataaaataataaataaatt
gataacaagcttcatagcacatttttgttttcctttaatgaaactcttct
gaacacactctgacatttcctatctaattttcatcccacaggtattcatt
tatcactctattaacatgcacatcagtaatggtgtcctaatctatctcac
tgtgctatcaattaggagaatatacttgaacatagggtggggagatttgc
taatacacaatttttttgaaacttgagatctctaatagtcctttgagtaa
tgtaatttctaacaatttttctattttaaaatgcaccttctgaaaataaa
actctgaaagattaagtataatattaacattaaactcataggtcaccatg
ttggttcatactatgacataaggcttacaaatgcttctgtatgtatgtac
ttattcatttacttacttgtttattttctcaacatcctgctgcactggga
atcctgatgattggatttcagttagaacacgcagagatcctaaagttaat
gacatattaaacattagctttactttctattctgaaattcagtatgctat
tatttgaacttcattgatcttgagacaatctcactatgttctcggctggc
tcaaattggaatatcctggatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_15143689_15144216
seq2: B6Ng01-148L14.b_399_937 (reverse)

seq1  GACCCCCCCC------TTCTTTTATTTTGTTCCCAACATACACCCAAGAG  44
      ||||||||||      ||| | ||||||||||||||||||| || |||||
seq2  GACCCCCCCCCCCCCTTTCATGTATTTTGTTCCCAACATAC-CCGAAGAG  49

seq1  GAGTAGATGTCAGG-AAATAATCAAATACAGAGTTGAAATCAACCAAGTA  93
      |||||||||||||| |||||||||||||||||| ||||||||||| ||||
seq2  GAGTAGATGTCAGGAAAATAATCAAATACAGAGCTGAAATCAACCCAGTA  99

seq1  GAAAC-AAAAGAACTATACAAAG-AATCAATAAAACCTGG-AGCTGGTTC  140
      ||||| |||||||||| |||||| |||||| |||||| || |||||||||
seq2  GAAACAAAAAGAACTAAACAAAGAAATCAAAAAAACCGGGAAGCTGGTTC  149

seq1  TTTGAGAAAGC-AACA-AAATAGATAAACCCTTAGCCAGACTAACCAGAG  188
      ||||||||||| |||| |||||||||| |||||||||||| |||||||||
seq2  TTTGAGAAAGCAAACACAAATAGATAATCCCTTAGCCAGATTAACCAGAG  199

seq1  GGCAAAGAGACAGTATCCAAATTAACAAAATCAGAATTGAAAAGGGAGAA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGAGACAGTATCCAAATTAACAAAATCAGAATTGAAAAGGGAGAA  249

seq1  ATAACAACAGAATAAACAGAATATTCAAAAATCATAATTTCCTATTACAA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAACAGAATAAACAGAATATTCAAAAATCATAATTTCCTATTACAA  299

seq1  AAGACTATACTCAACAATACTGAAAAAATTGGATGAAATGGACAATTTTC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTATACTCAACAATACTGAAAAAATTGGATGAAATGGACAATTTTC  349

seq1  TGGACAGACACTAGGTACCAAAATGAGACCAGGATCAGATAAACAGTCTA  388
      | |||||||||||||||||||||||| |||||||| ||||||||||||||
seq2  TAGACAGACACTAGGTACCAAAATGAAACCAGGATTAGATAAACAGTCTA  399

seq1  ACACTTCCATAACTGCCAAAGAAATAGAAGCAGTCATTAAAAGTCTCCCA  438
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCCATAACTGCCAAAGAAATAGAAGCAGTCATTAAAAGTCTCCCA  449

seq1  ACTAAACAAAGCCCAGGACTAGATGGGTTTAGTGCAGAATTCTATCAGAC  488
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACAAAGCCCAGGACTAGATGGGTTTAGTGCAGAATTCTATCAGAC  499

seq1  CTTCAAAGAAGACCTAATCCCAATACTCTTCAAACTATCC  528
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGAAGACCTAATCCCAATACTCTTCAAACTATCC  539

seq1: chr5_15139198_15140068
seq2: B6Ng01-148L14.g_210_1075

seq1  TCCATGTGAATTCAATGAACATTTATCATGATTTCAATATTATTGTTCAG  50
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCCATGTGAATTCAATGAACATTTATCATGATTTCAATTTTATTGTTCAG  50

seq1  AATTAATGTTCAAAAATTACGTGATTATC---TGTTA-TTTTATGAAACA  96
      ||||||||||||||||||| |||||||||   ||||| ||||||||||||
seq2  AATTAATGTTCAAAAATTAAGTGATTATCTGATGTTATTTTTATGAAACA  100

seq1  TGTTGGCAGTTGTTGACAATAATGAATTGAACCATCTCTCTTATTAAATT  146
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  TGTTGGCATTTGTTGACAATGATGAATTGAACCATCTCTCTTATTAAATT  150

seq1  TCAACAATTCAAATGCAATTTTTATCACTTATCTACTTATTTGTCTAGTA  196
      |||||||||||||||||| |||||||||||||  | ||||||||||||||
seq2  TCAACAATTCAAATGCAAGTTTTATCACTTATTAATTTATTTGTCTAGTA  200

seq1  GCACTAACCAGCTAAAATTAATTTTAGAAATCTTTTTCACATAAAATAAT  246
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCACTAACCAGCTAAAATTAATTTTAAAAATCTTTTTCACATAAAATAAT  250

seq1  AAATAAATTGATAACAAGCTTCATAGCACATTTTTGTTTGCCTTTAATGA  296
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAATAAATTGATAACAAGCTTCATAGCACATTTTTGTTTTCCTTTAATGA  300

seq1  AACTCTTCTGAACACACTCTGACATTTCCTATCTAATTCTCATCCCACAG  346
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACTCTTCTGAACACACTCTGACATTTCCTATCTAATTTTCATCCCACAG  350

seq1  GTATTCATTTATTACTCTATTAACATGCAGATCAGTAATAGTGTCTTAAT  396
      |||||||||||| |||||||||||||||| ||||||||| ||||| ||||
seq2  GTATTCATTTATCACTCTATTAACATGCACATCAGTAATGGTGTCCTAAT  400

seq1  CTATCTTACCGTGCTATCAATTAGGAGAATATCCTTGAACATAGGGTGGG  446
      |||||| || |||||||||||||||||||||| |||||||||||||||||
seq2  CTATCTCACTGTGCTATCAATTAGGAGAATATACTTGAACATAGGGTGGG  450

seq1  GAGATTTGCTAATACACAA-TTTTTTGAAACTTGATATCTCTAATAGTCC  495
      ||||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  GAGATTTGCTAATACACAATTTTTTTGAAACTTGAGATCTCTAATAGTCC  500

seq1  TTTGAGTAATGTAATTTCTAACAATTTTTCTA-TTTAAAATGCACCTTCT  544
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTGAGTAATGTAATTTCTAACAATTTTTCTATTTTAAAATGCACCTTCT  550

seq1  GAAAATAAAACTCTGAAAGATTAAGTATAATATTAACATTAAACTCATAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAACTCTGAAAGATTAAGTATAATATTAACATTAAACTCATAG  600

seq1  GTCACCATGTTGGTTCATACTATGACATAAGGCTTACAAATGCTTCTGTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCATGTTGGTTCATACTATGACATAAGGCTTACAAATGCTTCTGTA  650

seq1  TGTATGTACTTATTCATTTACTTACTTGTTTATTTTCTCTAACATCCTGC  694
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTATGTACTTATTCATTTACTTACTTGTTTATTTTCTC-AACATCCTGC  699

seq1  TGCACTGGGATTCCTGATGATTGGATTTCAGTTATGAGCAGGCAGAGATC  744
      |||||||||| ||||||||||||||||||||||| || || |||||||||
seq2  TGCACTGGGAATCCTGATGATTGGATTTCAGTTA-GAACACGCAGAGATC  748

seq1  CTAAAGTTAATGACATATTAAACATTTAGCTTTACTTTCTATTCTGAAAA  794
      |||||||||||||||||||||||| ||||||||||||||||||||| |||
seq2  CTAAAGTTAATGACATATTAAACA-TTAGCTTTACTTTCTATTCTG-AAA  796

seq1  TTCAGTTAATGCTATTATTTGAACTTTATTGATCTTTGAGACAAATCTCA  844
      ||||||  |||||||||||||||||| ||||||| ||||||| |||||||
seq2  TTCAGT--ATGCTATTATTTGAACTTCATTGATC-TTGAGAC-AATCTCA  842

seq1  CTATGTTTCTCAGGCTGGTCTCAAATT  871
      ||||| ||||| |||||| ||||||||
seq2  CTATG-TTCTC-GGCTGG-CTCAAATT  866