BAC Information

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BAC

Clone NameB6Ng01-149G06
Chromosome5 (Build37)
Map Location 33,327,728 - 33,328,488
singlet/doubletsinglet
Overlap geneDepdc5
Upstream geneBre, Fosl2, LOC672217, Plb1, EG665350, LOC545743, Ppp1cb, LOC634553, LOC675983, Yes1, LOC100039775, Pisd, C330019G07Rik, LOC100040141
Downstream geneYwhah, LOC100040169, Slc5a1, Spon2, Ctbp1, Maea, 4933407H18Rik, LOC672284, 2410018C17Rik, Slbp, Tmem129, Tacc3, Fgfr3, Letm1, LOC100040332, Whsc1, Whsc2, Gm1673
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149G06.bB6Ng01-149G06.g
ACCDH945740DH945741
length7631,032
definitionDH945740|Mus musculus domesticus DNA, BAC clone: B6Ng01-149G06, 5' end.DH945741|Mus musculus domesticus DNA, BAC clone: B6Ng01-149G06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataaatagctcctaaaaagctttccatgagtacaagatgacatt
ttcaaaagcaagaagctggagttgatgctaatgtatcaggagctgatagc
aagatcataaatgtgaaagacacaactctgatgtcagagaaatattttct
tcccactcccttgtaagtttgtgttacgctgaatggcagagggtgaggag
ggcttaccagagggcgggctaaacctagtgatcttgtgatttttatgaca
ggctgcctgctagtactgacagtctgtactctctgcttacaacttagcag
acatttttgtacctgagcactgcagagttcctctgcattggaggccagag
atcctgagctgcacaggactgagagaggaccatttatgcagtcctgcaat
gtgaatgatatgtttctcccagaaggttaggccaggcagctcactgcagt
gctgttaatatcttgaggggctacggttacctcattgtaacaggattgct
cccaggcattgtagctggtagtttccctgccagttctgacctggtcttct
aaaccatcaacctcagttggttaccatggttacaggggaagtcctaattt
aaaggaataggacccaaatctaaaattcaatttttctagattaggtgcct
ctattctttcttgtttttttacttcttgtaacaatgagtatacaccttaa
aatctggaataaatgtgggttggtatacgtgtgtatatatgtgaatgtgg
gtgtgtgtttgtg
gaattctctgtttacctctgttccccatttttaatagggatatttggttc
tctagagtctaacttcttgagttctttgtatatattagatatgagccctc
tatgggatgtaggataaataaagatctcccaatctgttggtggccgtttt
gtcctattgacagtgccctttgccttacagaagctttgcaaatttatgag
gttccatttgtcaattcttgatcttagagcataagctattgttctgttca
ggaactttcccctgtgcccatgtgttcgagatctccccactttcccttct
attagattgagtgtctctggttttatacggaggtccttgattcacttgga
cttgatccacttgtacaaggagataggaatggatcaatttgcattcttct
acatgttggtcgccagttgaaccagcaccatttgttgaaaatgctgtctt
ttttccactggtggttttagtttctttgtcaaagatcaagtgaccatagg
tgtgtgggttcatttctgggtcttcaattctattccatcgacctacctgc
cagtcactgtaccaataccatgcagttttatcactattgctctgtaatac
agcttgagggacaggatactgattccccaagttcttttagtgtggagaat
agtttttgatatcctaagtttttttttgttattccagatgaatttgagaa
ttgctctttttacctctatgaagaattgagttggaatttttgatggggat
tgcattgaatctgtatattgctttctgcaagatggccatttttactatat
taatcctgctaatccatgagcataaggtgattcttcatctttctgagatc
tcctcccatttcttttcttcagagacttgaaaattattctcatacagaac
tttcacttgtttggctagagtcccaccagatactttacattggttgttga
ctattggtgaagggggtcattcccctaatttcttttctggctgttatccg
ttggagtataggaggctactggatctggttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_33327728_33328488
seq2: B6Ng01-149G06.b_45_807

seq1  GAATTCATAAATAGCTCCTAAAAAGCTTTCCATGAGTACAAGATGACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAATAGCTCCTAAAAAGCTTTCCATGAGTACAAGATGACATT  50

seq1  TTCAAAAGCAAGAAGCTGGAGTTGATGCTAATGTATCAGGAGCTGATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAGCAAGAAGCTGGAGTTGATGCTAATGTATCAGGAGCTGATAGC  100

seq1  AAGATCATAAATGTGAAAGACACAACTCTGATGTCAGAGAAATATTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCATAAATGTGAAAGACACAACTCTGATGTCAGAGAAATATTTTCT  150

seq1  TCCCACTCCCTTGTAAGTTTGTGTTACGCTGAATGGCAGAGGGTGAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTCCCTTGTAAGTTTGTGTTACGCTGAATGGCAGAGGGTGAGGAG  200

seq1  GGCTTACCAGAGGGCGGGCTAAACCTAGTGATCTTGTGATTTTTATGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACCAGAGGGCGGGCTAAACCTAGTGATCTTGTGATTTTTATGACA  250

seq1  GGCTGCCTGCTAGTACTGACAGTCTGTACTCTCTGCTTACAACTTAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTGCTAGTACTGACAGTCTGTACTCTCTGCTTACAACTTAGCAG  300

seq1  ACATTTTTGTACCTGAGCACTGCAGAGTTCCTCTGCATTGGAGGCCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTGTACCTGAGCACTGCAGAGTTCCTCTGCATTGGAGGCCAGAG  350

seq1  ATCCTGAGCTGCACAGGACTGAGAGAGGACCATTTATGCAGTCCTGCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAGCTGCACAGGACTGAGAGAGGACCATTTATGCAGTCCTGCAAT  400

seq1  GTGAATGATATGTTTCTCCCAGAAGGTTAGGCCAGGCAGCTCACTGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGATATGTTTCTCCCAGAAGGTTAGGCCAGGCAGCTCACTGCAGT  450

seq1  GCTGTTAATATCTTGAGGGGCTACGGTTACCTCATTGTAACAGGATTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTAATATCTTGAGGGGCTACGGTTACCTCATTGTAACAGGATTGCT  500

seq1  CCCAGGCATTGTAGCTGGTAGTTTCCCTGCCAGTTCTGACCTGGTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCATTGTAGCTGGTAGTTTCCCTGCCAGTTCTGACCTGGTCTTCT  550

seq1  AAACCATCAACCTCAGTTGGTTACCATGGTTACAGGGGAAGTCCTAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCAACCTCAGTTGGTTACCATGGTTACAGGGGAAGTCCTAATTT  600

seq1  AAAGGAATAGGACCCAAATCTAAAATTCAA-TTTTCTAGATTAGGTGCCT  649
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAAGGAATAGGACCCAAATCTAAAATTCAATTTTTCTAGATTAGGTGCCT  650

seq1  CTATTC-TTCTTGTTTTCTTTACTTCTTGTAACAATGAGTATACACCTTA  698
      |||||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  CTATTCTTTCTTGTTTT-TTTACTTCTTGTAACAATGAGTATACACCTTA  699

seq1  AAATCTGGAATAAATGT-GGTTGGTATACGTGTGTATATATGTGAATGTG  747
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAATCTGGAATAAATGTGGGTTGGTATACGTGTGTATATATGTGAATGTG  749

seq1  GGTGTGTGTTTGTG  761
      ||||||||||||||
seq2  GGTGTGTGTTTGTG  763