BAC Information

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BAC

Clone NameB6Ng01-152O02
Chromosome5 (Build37)
Map Location 42,668,474 - 42,668,996
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC208522, Rab28, Bapx1, A230054D04Rik, LOC384308, LOC100040588
Downstream geneEG636612, LOC433883, EG665934, Cpeb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152O02.bB6Ng01-152O02.g
ACCDH948345DH948346
length1,0131,157
definitionDH948345|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O02, 5' end.DH948346|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggccacctttttcattaattattgttgcatactcatgtttat
atgcagatatattcctaagtataacctcatcagtctgtataatgttactt
gcatctgatcatttgctattggataacaagttggtgtgctcttccatgag
gaatactattttttccaactgtcagaattccttagttgtctatagttctt
tgtgtggggttgaggccttatgagctttcctgactatgttggtatgtcta
ttgttatttccctagttcagcttatatgtaggcagtcatattggtaatat
ttcatggcagtaccttctggcattattatgagacagttataacaacaaac
tctatgttcctctggttcttgcaatcttccttctctatttccagtgtcag
gcatggtttctctcttgttaaatgggcctcaagtctaattacagctattg
gtgaccaccaaggtgtgtatgccactactgagcctttagggctatagtgc
tatatggtccttgttgtgcttcataggttttatatctaggtaataatgta
gcttgcttacatgatgccttttggtaccactaaagctggtcatcagggaa
gactcagtcatcagctcagttccagctcagaggtctctgagccctgtgtc
tgaaattcatgggatctttcagcagtaaggacttaccttatgtttttcaa
gtccctctgaccaacaactcaaaagaagggttcttgtgtctggtattatg
gatttttgttaggatgtctttggctcttggagggagtgtagtctttctgc
agtacccttgctgtttttagaaaacatgctaatagctgattactgctatg
acattgtgttctcctaccatgtactggctgtcccccaaaaggctgagcac
caccagaagtgaatctatatcttatgcaaaggatttgaggtagagatgtt
gccagatatgtccatgttcccactcccaccccaccttagtaactgaattc
aaagctgctgctt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcctaa
tggagagctagagaagtacccaaggagctaagggatctcaaccttatagt
tggaacacattatgaactatcagtaccctgagctcttgactctagctgca
ttatgtattcaaagatggctagttcggcatcattgaaagaagcccattga
cgcaaattttggtgccctgtacatgtgacgtcaggtcaagggggtatgtg
gtgttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_42668474_42668996
seq2: B6Ng01-152O02.b_532_1054 (reverse)

seq1  AAGCA--AGCTTTGAATTCAGTTACTAAAGGGTGGGGTGGGAGTGGGAAC  48
      |||||  |||||||||||||||||||||  ||||||||||||||||||||
seq2  AAGCAGCAGCTTTGAATTCAGTTACTAA--GGTGGGGTGGGAGTGGGAAC  48

seq1  ATGGACATATCTGGCAACATCTCTACCTCAAATCCTTTTGCATAAGATAT  98
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGGACATATCTGGCAACATCTCTACCTCAAATCC-TTTGCATAAGATAT  97

seq1  AGATTCAACTTCTGGTGGTGCTCAGCCTTTTGGGGGACAGCCAGTACATG  148
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTC-ACTTCTGGTGGTGCTCAGCCTTTTGGGGGACAGCCAGTACATG  146

seq1  GTAGGAGAACACAATGTCATAGCAGTAATCAGCTATTAGCATGTTTTCTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGAACACAATGTCATAGCAGTAATCAGCTATTAGCATGTTTTCTA  196

seq1  AAAACAGCAAGGGTACTGCAGTAAGACTACACTCCCTCCAAGAGCCAAAG  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAACAGCAAGGGTACTGCAGAAAGACTACACTCCCTCCAAGAGCCAAAG  246

seq1  ACATCCTAAC-AAAATCCATAATACCAGACACAAGAACCCTTCTTTTGAG  297
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTAACAAAAATCCATAATACCAGACACAAGAACCCTTCTTTTGAG  296

seq1  TTGTTGGTCAGAGGGACTTGAAAAACATAAGGTAAGTCCTTACTGCTG-A  346
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGTTGGTCAGAGGGACTTGAAAAACATAAGGTAAGTCCTTACTGCTGAA  346

seq1  AGATCCCATGAATTTCAGACACAGGGCTCAGAGACCTCTGAGCTGGAACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCATGAATTTCAGACACAGGGCTCAGAGACCTCTGAGCTGGAACT  396

seq1  GAGCTGATGACTGAGTCTTCCCTGATGACCAGCTTTAGTGGTACCAAAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGATGACTGAGTCTTCCCTGATGACCAGCTTTAGTGGTACCAAAAG  446

seq1  GCATCATGTAAGCAAGCTACATTATTACCTAGATATAAAACCTATGAAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATGTAAGCAAGCTACATTATTACCTAGATATAAAACCTATGAAGC  496

seq1  ACAACAAGGACCATATAGCACTATAGC  523
      |||||||||||||||||||||||||||
seq2  ACAACAAGGACCATATAGCACTATAGC  523