BAC Information

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BAC

Clone NameB6Ng01-154M22
Chromosome9 (Build37)5 (Build37)
Map Location 12,839,285 - 12,839,32810,562,343 - 10,563,435
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039989, LOC622505, LOC100039680, LOC665285
Downstream geneLOC100039729, LOC100039758, Maml2, Mtmr2, Cep57, 2810485I05Rik, LOC665329
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154M22.bB6Ng01-154M22.g
ACCDH949753DH949754
length4491,085
definitionDH949753|Mus musculus domesticus DNA, BAC clone: B6Ng01-154M22, 5' end.DH949754|Mus musculus domesticus DNA, BAC clone: B6Ng01-154M22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(12,839,285 - 12,839,328)(10,562,343 - 10,563,435)
sequence
atcccataaacaagcatcaaaaccagacactactgtggatgccaacaggt
gcttcctgatagggacatgatttagctgtatcctgctaggttccgccagt
gcctggaaaatacagaagtagatgctcacagccatctattggatggagca
cagggttccaaatgatggagccagagcaagtatctgaggagctggagggg
tttgcattccattggaggaacaacaatattaactaacctgtactcccaaa
cctccctgggactaaaccaccaaccaaagaaaacacatggtgggactcat
ggctgtagctgcatatgtagcagaggatggcctcgttggccatcaatggg
aggagaggcccttggtcctatgaaggttatatgccccagtgtatgggact
gccagagccaggaagagtgagtgggtgggttagtgagcagggggggagg
gaattcctaagcactgagtttgggatttctcaaacaccaattttaagaac
ttttttccctatcacgtgaaattggtcgctccagctatttctgttcctgt
ttgttatgcacagatctttgcagattctagagcgagctgggaggtaagcc
ttcccccagttctgcaggctacagctgctcctaaataccaaggaacttgc
ctgtatctaaatccctgctgttgtgggagggcttatgtaactctgcctgg
tacttggtgcaaagcgaacaatggctaatttgaggaggacagaataactc
ttttttttttcattttttacaagtaacaacatgcttagaatttatttgtg
ctgtgaacttcctcttagttggtgtctcaaaatatgtgcatttgtcttct
ttttattcttatagataaatttgacaagcatggatgtaattcatgtctct
aacaacactatcacacagacttctctgtattataatcttttagcatatta
aatttttggtttcagtttttagaactgaatgacttgtaataattattatt
catgctatcatatattactttagaggaaacatgtgtaccacagcatagaa
agtttacatactagaaaataattattttgaacaacaaatggtagctaaat
ataaacacaatcatgacttcttttagcagtttatacttttcaaaaggaat
aataatcaattttcactatatactgtgatatgttatcatagaaacacatt
aaaataactacaggcatctagatcataagacatctaagtaggtctggaag
gagtgtatatggatatattatagtttacaattatctatgaagtgagttaa
attgtggttctttcatgatcccaaaaagcagaaaacaaagccagaatata
attggctaagtcagaagacatgtcttactaagtgtataaaattgcgaagt
tgactaagaaactatgctaccaagctgagaaaaatctgctaaaccatatg
ctcatcagctattttacatggattagagattttatcacatcctcatgatg
cattacagtatagccctagatttcttaactaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_12839285_12839328
seq2: B6Ng01-154M22.b_460_502 (reverse)

seq1  CCTCCTCCCCCTGCTCACCAACCCACCCACTCTCTCTTTCTGGC  44
      ||||| |||||||||||| ||||||||||||| ||||| |||||
seq2  CCTCC-CCCCCTGCTCACTAACCCACCCACTCACTCTTCCTGGC  43

seq1: chr5_10562343_10563435
seq2: B6Ng01-154M22.g_69_1153

seq1  GAATTCCTAAGCACTGAGTTTGGGATTTCTCAAACACCAATTTTAAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGCACTGAGTTTGGGATTTCTCAAACACCAATTTTAAGAAC  50

seq1  TTTTTTCCCTATCACGTGAAATTGGTCGCTCCAGCTATTTCTGTTCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCCTATCACGTGAAATTGGTCGCTCCAGCTATTTCTGTTCCTGT  100

seq1  TTGTTATGCACAGATCTTTGCAGATTCTAGAGCGAGCTGGGAGGTAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATGCACAGATCTTTGCAGATTCTAGAGCGAGCTGGGAGGTAAGCC  150

seq1  TTCCCCCAGTTCTGCAGGCTACAGCTGCTCCTAAATACCAAGGAACTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCAGTTCTGCAGGCTACAGCTGCTCCTAAATACCAAGGAACTTGC  200

seq1  CTGTATCTAAATCCCTGCTGTTGTGGGAGGGCTTATGTAACTCTGCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCTAAATCCCTGCTGTTGTGGGAGGGCTTATGTAACTCTGCCTGG  250

seq1  TACTTGGTGCAAAGCGAACAATGGCTAATTTGAGGAGGACAGAATAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGTGCAAAGCGAACAATGGCTAATTTGAGGAGGACAGAATAACTC  300

seq1  TTTTTTTTTTCATTTTTTACAAGTAACAACATGCTTAGAATTTATTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCATTTTTTACAAGTAACAACATGCTTAGAATTTATTTGTG  350

seq1  CTGTGAACTTCCTCTTAGTTGGTGTCTCAAAATATGTGCATTTGTCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAACTTCCTCTTAGTTGGTGTCTCAAAATATGTGCATTTGTCTTCT  400

seq1  TTTTATTCTTATAGATAAATTTGACAAGCATGGATGTAATTCATGTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCTTATAGATAAATTTGACAAGCATGGATGTAATTCATGTCTCT  450

seq1  AACAACACTATCACACAGACTTCTCTGTATTATAATCTTTTAGCATATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACACTATCACACAGACTTCTCTGTATTATAATCTTTTAGCATATTA  500

seq1  AATTTTTGGTTTCAGTTTTTAGAACTGAATGACTTGTAATAATTATTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGGTTTCAGTTTTTAGAACTGAATGACTTGTAATAATTATTATT  550

seq1  CATGCTATCATATATTACTTTAGAGGAAACATGTGTACCACAGCATAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTATCATATATTACTTTAGAGGAAACATGTGTACCACAGCATAGAA  600

seq1  AGTTTACATACTAGAAAATAATTATTTTGAACAACAAATGGTAGCTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTACATACTAGAAAATAATTATTTTGAACAACAAATGGTAGCTAAAT  650

seq1  ATAAACACAATCATGACTTCTTTTAGCAGTTTATACTTTTCAAAAGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACACAATCATGACTTCTTTTAGCAGTTTATACTTTTCAAAAGGAAT  700

seq1  AATAATCAATTTTCACTATATACTGTGATATGTTATCATAGAAACACATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAATTTTCACTATATACTGTGATATGTTATCATAGAAACACATT  750

seq1  AAAATAACTACAGGCATCTAGATCATAAGACATCTAAGTAGGTCTGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTACAGGCATCTAGATCATAAGACATCTAAGTAGGTCTGGAAG  800

seq1  GAGTGTATATGGATATATTATAGTTTACAATTATCTATGAAGTGAGTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTATATGGATATATTATAGTTTACAATTATCTATGAAGTGAGTTAA  850

seq1  ATTGTGGTTCTTTCATGATCCCAAAAAGCAGAAAACAAAGCCAGAATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGTTCTTTCATGATCCCAAAAAGCAGAAAACAAAGCCAGAATATA  900

seq1  ATTGGCTAAGTCAGAAGACAATGTCTTACTAAGTGTATAAAATTGCGAAG  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTGGCTAAGTCAGAAGAC-ATGTCTTACTAAGTGTATAAAATTGCGAAG  949

seq1  TTGACTAAGAAACTAATGCCTACCAAGCTGAGAAAAATCTGCTAAACCAT  1000
      |||||||||||||| ||| |||||||||||||||||||||||||||||||
seq2  TTGACTAAGAAACT-ATG-CTACCAAGCTGAGAAAAATCTGCTAAACCAT  997

seq1  ATGCTCATCAGCTATTTTACATGGATTAGAGATTTTATCACATCCTCAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  ATGCTCATCAGCTATTTTACATGGATTAGAGATTTTATCACATCCTCA--  1045

seq1  TAGATGCATTACAGTATAGCCCCTAGTATTCTTAAACTAAAAG  1093
        ||||||||||||||||| ||||||  ||||| |||||||||
seq2  -TGATGCATTACAGTATAG-CCCTAGATTTCTT-AACTAAAAG  1085