MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-160A09
Chromosome	5 (Build37)
Map Location	85,866,943 - 85,868,088
singlet/doublet	singlet
Overlap gene	none
Upstream gene	none
Downstream gene	Cenpc1, LOC100039521, AI586015, Ube1l2, Gnrhr, Tmprss11c, Tmprss11d, Tmprss11a
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cenpc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12617 MGI:99700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039521 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs pseudo : _no_value

name	AI586015 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56792 MGI:1926193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube1l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231380 MGI:1913894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnrhr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14715 MGI:95790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmprss11c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435845 MGI:3521861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmprss11d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231382 MGI:2385221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmprss11a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194597 MGI:2684853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cenpc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802028 GeneID:12617 MGI:99700
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein C1 transcript_id : NM_007683.2

name	AI586015 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385057 GeneID:56792 MGI:1926193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI586015 transcript_id : NM_019992.3

name	Ube1l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254245 GeneID:231380 MGI:1913894
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-activating enzyme E1-like 2 transcript_id : NM_172712.2

name	Gnrhr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754031 GeneID:14715 MGI:95790
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gonadotropin releasing hormone receptor transcript_id : NM_010323.1

name	Tmprss11c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:100815530 GeneID:435845 MGI:3521861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 11c transcript_id : NM_001030297.2

name	Tmprss11d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130165 GeneID:231382 MGI:2385221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 11d transcript_id : NM_145561.2

name	Tmprss11a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366997 GeneID:194597 MGI:2684853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protease, serine 11a transcript_id : NM_001033233.2

name	Cenpc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671740 GeneID:12617 MGI:99700
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation function : centromeric protein product : centromere autoantigen C1 protein_id : NP_031709.1

name	AI586015 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910568 CCDS:CCDS19377.1 GeneID:56792 MGI:1926193
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005070 - SH3/SH2 adaptor activity [Evidence IDA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030099 - myeloid cell differentiation [Evidence TAS]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IDA] codon_start : 1 note : stem cell adaptor protein STAP-1 product : BCR downstream signaling 1 protein_id : NP_064376.1

name	Ube1l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370032 CCDS:CCDS19378.1 GeneID:231380 MGI:1913894
definition	codon_start : 1 product : ubiquitin-activating enzyme E1-like 2 protein_id : NP_766300.1

name	Gnrhr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754032 CCDS:CCDS19379.1 GeneID:14715 MGI:95790
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : gonadotropin releasing hormone receptor protein_id : NP_034453.1

name	Tmprss11c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71892422 CCDS:CCDS19380.1 GeneID:435845 MGI:3521861
definition	GO_function : GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : neurobin product : transmembrane protease, serine 11c protein_id : NP_001025468.1

name	Tmprss11d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704106 GeneID:231382 MGI:2385221
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : airway spesific trypsin-like protease; airway trypsin-like protease product : transmembrane protease, serine 11d precursor protein_id : NP_663536.1

name	Tmprss11a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794609 GeneID:194597 MGI:2684853
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : airway trypsin-like protease 1 product : transmembrane protease, serine 11a protein_id : NP_001028405.1

name	LOC100039521 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253987 GeneID:100039521
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to RNA polymerase I associated factor (Paf53) pseudo : _no_value transcript_id : XR_031063.1

clone name	MSMg01-340L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484O04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-189M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386J07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-330N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-454J02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-068E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186D02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-411B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-399B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163J12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-160A09.b	B6Ng01-160A09.g
ACC	DH953512	DH953513
length	1,230	1,130
definition	DH953512\|Mus musculus domesticus DNA, BAC clone: B6Ng01-160A09, 5' end.	DH953513\|Mus musculus domesticus DNA, BAC clone: B6Ng01-160A09, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgtttagatctgtaccccatttttaatggggttatttgaatt tctggagtccagcttatgagctctttgtatatattggatattagtcccct atcagatttaggattggtaaaaatcctttcacaatctgttggtggccttt ttgtcttattgacagtgtcttttgccttacaaaagctttgcgattttatg aggtcccatttgtagattcttgatcttacagcacaggccattgctgtttt gctcgggaatttttgccctgtgcccatatctttgaggcttttccccacct tcctcctctataagtttcactgtctctggttttatgtagtgttccttgat ccacttagacttgagctttgtacaaggagataagaatggatcaattcaaa ttcttctacatgataactgccagttgtgccagcaccattcgtagaaaatg ttatcttttttctactggatagttttaactcctttgtcaaagatcaagtg agcataggtgtgtgggttcatttctgggtctttaattctattccattgat ctacctgtctgttgtcgtaccagtaccatgcagtttttatcacaattgct ctgtagtataactttaggtcagacatggtgattccaccagaggttctttt atttttgagaacagttttcctatcctaggattttaatttttccagatgaa tttgcaaattaccctttctaactctgtgaaaaattgagttgaaatttata tggggattgcattgagtctgtaggttgctttctgcaagataagtattttt aatatattaatcctaccagtccagtagcatgggagatctttccatctcct gagatcttctttgatttctttcttcagagacttgaagtcttaacatacag acctttcacttacttagttagagttacagcatgtatttatgtatttgtga ctatgtgaatgtgttgtttccctattctttctacctgttatcttttgtgt agaaagtcactgatttgttagagataattttatattctagcattacactt aagctgtttatcagtttaggagttcttgttgatttaggaaaagtttatgt accatcttcaattacaaaaggtaatttggacttctctcttcaattgatca ttgtgatatttttatgtccaatgctgttggaccccggacattggtaccca tgcaaatgatgtgcaaatgctccgtcgtac	gaattctttgtacatatcatctgaagactttaagaaacaaagccattttt ataatatacatgcattttactcacacaatcatctagtgtatccactctac cctccatctctctgtccaccacacatctcacctagtcaattttctcttac ccatttctgtttccaaatcttctctgctgaatactggacttcttagaatt ctttatcatttagtgacattatcttttataagaattggcaaatattttaa accctgctacagattttgcctttaaagttgcttagcttctaaaaaaaagt attataatatggaaacattcagactctgagaacaaaggaatttatgcagc attctatgtttcttcttgtcagcatggtgggattccaatacatagtttag tttctgtaggtattacatgagaatatctaaggaaaattggttgaggaagt catgtctaacaaaatgttatagatatatttagtttatacccagtagaagg cctttctaacttgttatatcttcttcattttctttcttcaatgacttgaa gttcttgccatacaggtctttatttcaaattgaagtagtgtggattatca ggcatacagttagaaagtggcacgtaagaagagctttatggaccagttat gaacggctgcacctggccacgagttatgatataactccttccaattttta tctctctatatttgaatcttatacttttttttagttaggcataaagattt gttgagtttgattttattttcaaaatactctttaaaaaaaagtcaacctt ttttattggatgtctgccttcaattgcctgtgagtctgttattatctttt attgcttttatatttggccatttttgatttctttgagtatagcattatat tatttgatgtctattatattgatatcttccattattctcactgttgacat agctgtgtctcaatttctttttgttttaattttaatgtgcttatcttctg tgattgccatgagcatctgtttttattttatgtatgcaagttctatatta tttatatagtattcagcaatgacttgttgtagaacaatattttcttatta tttcagattgtttagggttatccatggttt
quality values	Open. Hide. 47 20 25 37 61 47 61 61 61 47 47 50 47 35 47 37 43 55 47 47 61 61 61 61 61 12 12 10 10 12 23 28 19 29 18 29 43 59 61 61 61 61 59 61 61 59 61 59 61 61 61 59 59 61 61 61 61 61 61 61 59 59 61 61 59 59 61 59 52 39 52 30 30 35 36 36 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 59 61 61 61 59 59 59 59 49 61 59 59 59 59 59 61 61 61 59 61 61 59 59 59 59 59 61 61 61 61 61 59 59 59 52 59 59 59 59 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 59 59 59 59 59 59 61 61 59 59 61 59 59 59 59 59 61 59 59 61 61 59 59 59 59 59 59 61 61 61 59 59 61 61 59 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 59 59 61 61 61 59 61 61 59 61 59 59 59 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 59 55 61 61 61 61 61 61 61 61 61 61 61 59 61 52 59 59 59 61 59 61 59 61 61 61 59 61 59 55 44 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 55 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 55 55 52 55 61 61 55 61 61 61 61 61 55 61 61 61 55 55 61 55 55 52 61 55 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 61 50 61 53 61 61 53 61 61 61 50 53 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 50 61 61 53 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 39 61 61 53 61 52 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 53 61 53 61 61 61 52 61 61 61 53 57 57 57 57 57 47 57 45 57 53 57 53 53 57 53 57 57 57 53 57 57 57 52 36 57 57 57 52 53 57 53 53 53 57 57 57 57 57 57 57 43 53 53 45 57 43 47 53 53 53 34 45 57 47 53 53 45 53 57 53 53 52 52 57 57 57 52 45 37 52 50 53 33 47 53 53 57 52 57 57 57 57 45 53 45 45 52 45 53 53 52 57 57 57 50 39 23 22 52 47 45 57 29 43 53 57 57 45 53 32 26 53 57 53 37 41 53 34 19 41 12 57 24 52 52 42 57 57 53 40 39 52 52 57 53 41 47 24 38 46 42 42 42 42 57 57 53 50 53 40 52 50 53 53 38 37 12 52 52 15 57 57 30 39 42 25 57 57 57 37 34 37 36 26 57 30 40 52 40 29 57 53 40 36 36 57 37 41 37 33 36 57 42 33 57 44 52 36 30 42 42 47 53 40 52 36 41 40 57 57 57 35 23 53 47 53 31 32 32 30 31 57 16 14 57 44 33 33 34 37 37 57 33 39 29 22 33 30 25 27 32 48 41 32 30 35 48 32 41 30 36 18 45 14 41 38 35 35 51 43 43 35 30 28 29 33 31 48 17 27 39 28 25 29 29 46 46 51 29 30 29 34 35 29 29 28 29 28 36 29 44 44 28 29 22 39 28 24 25 32 29 25 28 28 33 22 29 28 28 29 46 31 30 22 21 13 30 10 18 21 36 29 24 35 33 29 34 30 20 29 27 17 18 13 29 22 33 39 29 51 28 26 35 23 46 32 36 28 51 29 43 34 31 31 20 15 43 21 28 24 28 31 29 31 38 18 44 24 21 30 17 29 29 21 29 20 29 25 23 43 21 23 24 51 28 26 23 27 24 39 31 35 21 26 31 22 31 26 28 17 34 20 28 22 21 29 16 23 17 33 18 34 19 24 38 51 28 8 9 28 23 19 14 51 21 24 27 28 33 26 20 15 8 4 5 22 19 26 11 29 4 29 9 20 29 7 44 20 28 44 23 8 6 5 5 12 7 44 17 25 31 30 11 24 22 26 27 12 5 7 19 9 37 42 23 16 13 29 8 10 17 11 42 14 18 7 24 18 29 23 26 29 26 34 13 31 13 21 12 9 19 16 30 18 29 31 13 34 30 16 5 6 18 8 5 12 9 24 23 13 6 15 18 20 6 6 12 8 14 12 19 11 25 11 20 9 25 9 3 4 22 8 15 3 24 13 13 15 8 18 5 6 7 14 10 5 4 1 6 14 4 3 3 15 4 4 5 4 5 3 17 3 4 4 5 4 3 5 4 5 9 12 8 2 3 1 3 5 3 3 4 3 6 14 9 16 13 21 8 9 5 11 8 16 27 27 5 8 12 5 8 4 9 3 7 20 11 4 7 11 3 6 7 7 9 7 3 3 1 10 18 4 4 6 9 5 4 4 11 29 9 9 7 5 12 4 11 4 7 8 13 4 3 2 5 2 4 1 1 1 5 7 6 4 5 11 5 7 2 3 6 5 3 2 4 3 4 7 3 1 1 1 1 12 8 4 4 20 4 10 6 13 4 4 16 8 7 8 13 4 13 4 14 7 5 4 14 4 4	Open. Hide. 61 47 49 49 61 17 17 15 12 12 18 12 12 9 18 22 34 40 43 59 61 61 61 59 59 59 61 59 59 59 61 61 61 61 59 59 61 61 59 59 61 52 59 59 49 59 59 61 52 45 31 35 24 26 28 27 36 41 59 59 59 59 59 43 59 59 61 59 61 59 59 59 59 59 59 59 59 59 59 61 59 59 59 59 59 52 59 61 59 59 59 59 61 59 61 59 61 59 59 59 61 59 59 59 59 59 59 59 59 59 59 59 59 61 59 61 61 59 61 55 55 59 59 59 59 61 61 61 61 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 59 61 61 61 61 59 61 59 61 61 61 61 61 59 49 61 61 59 59 61 61 61 61 59 59 59 59 59 59 59 59 43 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 59 59 52 49 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 59 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 59 61 59 59 52 43 61 59 59 61 61 61 55 43 55 61 61 52 55 55 55 61 61 55 55 61 61 61 61 61 61 55 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 55 61 61 61 61 55 61 61 55 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 50 50 61 61 31 31 38 31 35 50 61 61 47 52 61 61 53 53 61 61 61 61 43 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 52 61 53 43 61 39 61 53 61 61 61 52 43 61 61 61 61 61 32 61 61 53 53 61 61 61 61 61 61 61 61 45 53 61 61 61 61 53 57 57 57 50 57 50 50 57 53 57 57 53 53 53 53 47 57 53 53 57 57 53 57 57 52 57 50 53 47 53 52 53 57 53 53 57 53 53 34 43 57 57 47 35 53 47 38 53 53 53 57 42 50 53 45 52 42 29 53 39 47 26 47 50 36 39 40 45 57 39 45 53 50 53 38 52 50 53 50 50 50 57 57 38 28 57 53 45 42 52 50 38 45 52 38 57 47 45 57 26 52 41 57 53 38 45 57 47 37 27 39 31 22 41 47 42 33 38 46 43 31 47 57 34 53 53 45 31 45 53 34 53 50 29 39 30 41 32 53 33 52 32 42 30 40 52 36 37 40 30 37 47 50 53 39 32 35 50 17 7 57 21 57 57 57 31 30 32 53 36 38 30 52 34 40 37 42 30 57 50 40 40 53 24 40 24 19 40 28 40 33 15 57 44 53 57 57 57 53 37 32 33 27 38 24 52 30 37 40 37 57 31 31 30 13 57 32 41 34 17 33 41 16 28 47 19 11 28 18 53 53 26 30 24 45 53 18 37 22 57 53 53 31 33 29 27 47 24 57 37 37 53 53 57 53 57 57 40 17 22 31 15 30 23 17 5 44 51 47 39 15 14 20 9 25 11 13 15 30 19 30 27 30 29 32 24 28 32 26 28 12 30 24 12 31 28 47 22 26 29 19 29 29 27 41 26 18 14 22 16 20 9 14 27 44 46 25 21 18 28 35 19 29 44 44 29 10 17 16 20 36 26 29 31 6 9 20 20 51 51 51 20 23 17 10 16 21 29 21 28 14 15 22 15 33 24 16 19 29 33 14 9 36 28 17 16 28 25 17 19 51 29 26 27 13 26 6 22 18 19 10 6 15 12 34 13 29 25 13 10 29 23 43 25 21 16 26 19 21 25 13 6 29 21 15 28 23 26 21 40 18 16 23 28 23 19 23 29 14 34 27 33 10 9 17 29 23 24 21 27 31 51 31 28 20 44 44 51 28 20 25 36 51 33 21 28 22 51 51 24 23 33 16 32 11 20 9 5 6 23 9 34 12 17 31 19 38 15 20 34 19 12 7 5 7 15 10 12 22 11 34 23 7 25 7 24 10 44 44 39 29 20 30 44 44 5 14 5 4 14 7 5 9 22 14 14 8 17 9 14 6 9 6 14 29 26 6 12 12 24 3 4 3 6 5 12 10 15 17 9 31 6 5 5 1 1 3 8 26 11 9 9 9 9 8 3 3 3 6 16 12 4 7 4 4 4 7 22 23 13 25 19 7 7 5 13 10 10 14 5 6 15 11 10 8 4 5 7 10 4 3 11 8 11 3 4 11 4 15 20 5 25 7 7 27 5 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_85866943_85868088
seq2: B6Ng01-160A09.g_69_1198 (reverse)

seq1  AAACAATGGATAACCCACTAAACAATACTGAAATAATAAGAAATATA-TG  49
      |||| ||||||||||  ||||||||| |||||||||||||||| ||| ||
seq2  AAACCATGGATAACC--CTAAACAAT-CTGAAATAATAAGAAA-ATATTG  46

seq1  TTCTAACAAC-AGTCATATAGCTGGAATACTATAATAAAATAAATATAGA  98
      |||| ||||| ||||  || ||| ||||||||| |||||   ||||||| 
seq2  TTCT-ACAACAAGTC--ATTGCT-GAATACTAT-ATAAA--TAATATAG-  88

seq1  AAACTTGCATAACATAAAATAAAAACAGGATGCTCATGGACAATCACAGA  148
       ||||||||| |||||||||||||||| ||||||||||| ||||||||||
seq2  -AACTTGCAT-ACATAAAATAAAAACA-GATGCTCATGG-CAATCACAGA  134

seq1  AGAT-AGCACATTAAAATTAAAAACAAAAAAGAAAATTGAGACACAGCTA  197
      |||| |||||||||||||| ||||||||||   |||||||||||||||||
seq2  AGATAAGCACATTAAAATT-AAAACAAAAA--GAAATTGAGACACAGCTA  181

seq1  TGTCAACAGTGAGAATAATGGAAGATATCAATTATATAGACATCAAATAA  247
      ||||||||||||||||||||||||||||||||   |||||||||||||||
seq2  TGTCAACAGTGAGAATAATGGAAGATATCAATATAATAGACATCAAATAA  231

seq1  TATAATGCTATACTCAAAGAAATCAAAAATGGCCCAAATATAAAAGCAAT  297
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATAATGCTATACTCAAAGAAATCAAAAATGG-CCAAATATAAAAGCAAT  280

seq1  AAAAGATAATAACAGACTCACAGGCAATTGAAGGCAGACATCCAAT-AAA  346
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAAGATAATAACAGACTCACAGGCAATTGAAGGCAGACATCCAATAAAA  330

seq1  AAGGTTGACTTTTTTTTAAAGAGTATTTTGAAAATAAAATCAAACTCAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGACTTTTTTTTAAAGAGTATTTTGAAAATAAAATCAAACTCAAC  380

seq1  AAATCTTTATGCCTAACTAAAAAAAAAGTATAAGATTCAAATATAGAGAG  446
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAATCTTTATGCCTAACT-AAAAAAAAGTATAAGATTCAAATATAGAGAG  429

seq1  AT-AAAATTGGAAGGAGTTATATCATAACTCGTGGCCAGGTGCAGCCGTT  495
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTGGAAGGAGTTATATCATAACTCGTGGCCAGGTGCAGCCGTT  479

seq1  CATAACTGGTCCATAAAGCTCTTCTTACGTGCCACTTTCTAACTGTATGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTGGTCCATAAAGCTCTTCTTACGTGCCACTTTCTAACTGTATGC  529

seq1  CTGATAATCCACACTACTTCAATTTGAAATAAAGACCTGTATGGCAAGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAATCCACACTACTTCAATTTGAAATAAAGACCTGTATGGCAAGAA  579

seq1  CTTCAAGTCATTGAAGAAAGAAAATGAAGAAGATATAACAAGTTAGAAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTCATTGAAGAAAGAAAATGAAGAAGATATAACAAGTTAGAAAG  629

seq1  GCCTTCTACTGGGTATAAACTAAATATATCTATAACATTTTGTTAGACAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTACTGGGTATAAACTAAATATATCTATAACATTTTGTTAGACAT  679

seq1  GACTTCCTCAACCAATTTTCCTTAGATATTCTCATGTAATACCTACAGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCTCAACCAATTTTCCTTAGATATTCTCATGTAATACCTACAGAA  729

seq1  ACTAAACTATGTATTGGAATCCCACCATGCTGACAAGAAGAAACATAGAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTATGTATTGGAATCCCACCATGCTGACAAGAAGAAACATAGAA  779

seq1  TGCTGCATAAATTCCTTTGTTCTCAGAGTCTGAATGTTTCCATATTATAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCATAAATTCCTTTGTTCTCAGAGTCTGAATGTTTCCATATTATAA  829

seq1  TACTTTTTTTTAGAAGCTAAGCAACTTTAAAGGCAAAATCTGTAGCAGGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTTTTAGAAGCTAAGCAACTTTAAAGGCAAAATCTGTAGCAGGG  879

seq1  TTTAAAATATTTGCCAATTCTTATAAAAGATAATGTCACTAAATGATAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATATTTGCCAATTCTTATAAAAGATAATGTCACTAAATGATAAA  929

seq1  GAATTCTAAGAAGTCCAGTATTCAGCAGAGAAGATTTGGAAACAGAAATG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGAAGTCCAGTATTCAGCAGAGAAGATTTGGAAACAGAAATG  979

seq1  GGTAAGAGAAAATTGACTAGGTGAGATGTGTGGTGGACAGAGAGATGGAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAGAAAATTGACTAGGTGAGATGTGTGGTGGACAGAGAGATGGAG  1029

seq1  GGTAGAGTGGATACACTAGATGATTGTGTGAGTAAAATGCATGTATATTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGTGGATACACTAGATGATTGTGTGAGTAAAATGCATGTATATTA  1079

seq1  TAAAAATGGCTTTGTTTCTTAAAGTCTTCAGATGATATGTACAAAGAATT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGGCTTTGTTTCTTAAAGTCTTCAGATGATATGTACAAAGAATT  1129

seq1  C  1146
      |
seq2  C  1130

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information