BAC Information

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BAC

Clone NameB6Ng01-160O19
Chromosome5 (Build37)
Map Location 44,391,417 - 44,391,625
singlet/doubletsinglet
Overlap geneProm1
Upstream geneEG665934, Cpeb2, C1qtnf7, 4833430A08Rik, 5730509K17Rik, Fbxl5, Bst1, Cd38, EG665989, EG665994, LOC100040677, EG384179, Fgfbp1
Downstream geneLOC100041413, Tapt1, LOC100040717, LOC545747, Ldb2, LOC100041481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160O19.bB6Ng01-160O19.g
ACCDH954174DH954175
length103209
definitionDH954174|Mus musculus domesticus DNA, BAC clone: B6Ng01-160O19, 5' end.DH954175|Mus musculus domesticus DNA, BAC clone: B6Ng01-160O19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aatccccagactccacactgtccgaagaagtgaaacaactcacacaagtt
gatcgctgacctacaaacacacatacacacacacacacacacacacgggg
ggg
actgggcaggtaatactcaaagttatctggcaaatccagacccataggaa
gtcccttaactccgcagaccataaaaacacaaggattttaaaggaagaat
ttgagttcttttttctggttgattacagttaatttgctggagagaggcaa
aaaggaaggggaggagggagacagggcaggagggagacagggagacaggg
agggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_44391417_44391625
seq2: B6Ng01-160O19.g_74_282

seq1  ACTGGGCAGGTAATACTCAAAGTTATCTGGCAAATCCAGACCCATAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCAGGTAATACTCAAAGTTATCTGGCAAATCCAGACCCATAGGAA  50

seq1  GTCCCTTAACTCCGCAGACCATAAAAACACAAGGATTTTAAAGGAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTAACTCCGCAGACCATAAAAACACAAGGATTTTAAAGGAAGAAT  100

seq1  TTGAGTTCTTTTTTCTGGTTGATTACAGTTAATTTGCTGGAGAGAGGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTCTTTTTTCTGGTTGATTACAGTTAATTTGCTGGAGAGAGGCAA  150

seq1  AAAGGAAGGGGAGGAGGGAGACAGGGCAGGAGGGAGACAGGGAGACAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGGGAGGAGGGAGACAGGGCAGGAGGGAGACAGGGAGACAGGG  200

seq1  AGGGAGGGA  209
      |||||||||
seq2  AGGGAGGGA  209