MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-162M16
Chromosome	5 (Build37)
Map Location	150,995,710 - 150,996,918
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040006, Uspl1, 2310047D07Rik, Alox5ap, 6330406I15Rik, 4930588N13Rik, LOC100040037, LOC100040062, 4930434E21Rik, Hsp110, EG433968, B3galtl, LOC100040089, Rxfp2
Downstream gene	LOC667470, Fry, LOC100042068, Gm5, XM_359419, Brca2, B230342M21Rik, BC037393, Aprin, LOC100040180, Kl, LOC667510, Stard13
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040006 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Uspl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231915 MGI:2442342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047D07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69657 MGI:1916907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Alox5ap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11690 MGI:107505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6330406I15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70717 MGI:1917967
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930588N13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75860 MGI:1923110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 2 Proteins

name	LOC100040037 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100040062 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040062
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	4930434E21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381693 MGI:1923042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsp110 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15505 MGI:105053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433968 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433968 MGI:3648428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 521 ESTs, 19 Proteins

name	B3galtl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381694 MGI:2685903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040089 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Rxfp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140498 MGI:2153463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667470 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Fry (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320365 MGI:2443895
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 92 ESTs, 3 Proteins

name	LOC100042068 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Gm5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194292 MGI:2684851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	XM_359419 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545824 MGI:3690051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins

name	Brca2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12190 MGI:109337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	B230342M21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100637 MGI:2140872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC037393 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381695 MGI:2687207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aprin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100710 MGI:2140945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040180 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Kl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16591 MGI:1101771
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667510 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins pseudo : _no_value

name	Stard13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243362 MGI:2385331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040006 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254751 GeneID:100040006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040006 transcript_id : XM_001473934.1

name	Uspl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701435 GeneID:231915 MGI:2442342
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase like 1 transcript_id : NM_001013378.1

name	2310047D07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375863 GeneID:69657 MGI:1916907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 2310047D07 gene transcript_id : XM_990491.1

name	Alox5ap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33563241 GeneID:11690 MGI:107505
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arachidonate 5-lipoxygenase activating protein transcript_id : NM_009663.1

name	6330406I15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363148 GeneID:70717 MGI:1917967
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330406I15 gene transcript_id : NM_027519.2

name	4930588N13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375866 GeneID:75860 MGI:1923110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 2 Proteins product : RIKEN cDNA 4930588N13 gene, transcript variant 1 transcript_id : XM_132524.6

name	4930434E21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119508423 GeneID:381693 MGI:1923042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930434E21 gene transcript_id : NM_029440.3

name	Hsp110 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145504 GeneID:15505 MGI:105053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 110 transcript_id : NM_013559.2

name	EG433968 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254784 GeneID:433968 MGI:3648428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 521 ESTs, 19 Proteins product : predicted gene, EG433968 transcript_id : XM_485703.4

name	B3galtl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487080 GeneID:381694 MGI:2685903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta 1,3-galactosyltransferase-like transcript_id : NM_001081204.1

name	LOC100040089 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254785 GeneID:100040089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100040089 transcript_id : XM_001474065.1

name	Rxfp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17978287 GeneID:140498 MGI:2153463
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : relaxin/insulin-like family peptide receptor 2 transcript_id : NM_080468.1

name	Fry (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254792 GeneID:320365 MGI:2443895
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 92 ESTs, 3 Proteins product : furry homolog (Drosophila) transcript_id : XM_001477828.1

name	LOC100042068 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254794 GeneID:100042068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042068 transcript_id : XM_001477843.1

name	Gm5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375873 GeneID:194292 MGI:2684851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : gene model 5, (NCBI) transcript_id : XM_110552.6

name	XM_359419 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375874 GeneID:545824 MGI:3690051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins product : Mus musculus sequence XM_359419 transcript_id : XM_359419.5

name	Brca2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487410 GeneID:12190 MGI:109337
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : breast cancer 2 transcript_id : NM_009765.2

name	Brca2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487408 GeneID:12190 MGI:109337
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : breast cancer 2 transcript_id : NM_001081001.1

name	B230342M21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922705 GeneID:100637 MGI:2140872
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230342M21 gene transcript_id : NM_133898.3

name	BC037393 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130950 GeneID:381695 MGI:2687207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC037393 transcript_id : NM_201369.2

name	Aprin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129869 GeneID:100710 MGI:2140945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : androgen-induced proliferation inhibitor transcript_id : NM_175310.5

name	LOC100040180 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254787 GeneID:100040180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001474228.1

name	Kl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7705569 GeneID:16591 MGI:1101771
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : klotho transcript_id : NM_013823.1

name	Stard13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122850 GeneID:243362 MGI:2385331
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serologically defined colon cancer antigen 13 transcript_id : NM_146258.1

name	LOC100040006 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254752 GeneID:100040006
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473984.1

name	Uspl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701436 GeneID:231915 MGI:2442342
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ubiquitin specific peptidase like 1 protein_id : NP_001013396.1

name	2310047D07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375864 GeneID:69657 MGI:1916907
definition	codon_start : 1 product : hypothetical protein LOC69657 protein_id : XP_995585.1

name	Alox5ap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563242 GeneID:11690 MGI:107505
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0019370 - leukotriene biosynthesis [Evidence IEA] codon_start : 1 note : arachidonate 5 lipoxygenase activating protein product : arachidonate 5-lipoxygenase activating protein protein_id : NP_033793.1

name	6330406I15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734078 CCDS:CCDS19884.1 GeneID:70717 MGI:1917967
definition	codon_start : 1 product : hypothetical protein LOC70717 protein_id : NP_081795.1

name	4930588N13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51711287 GeneID:75860 MGI:1923110
definition	codon_start : 1 product : hypothetical protein LOC75860 isoform 1 protein_id : XP_132524.3

name	4930434E21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119508424 GeneID:381693 MGI:1923042
definition	codon_start : 1 product : hypothetical protein LOC381693 protein_id : NP_083716.2

name	Hsp110 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145505 CCDS:CCDS19885.1 GeneID:15505 MGI:105053
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IDA] GO_process : GO:0051085 - chaperone cofactor-dependent protein folding [Evidence IDA]; GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock protein, 105 kDa; HSP105 42 C-HSP product : heat shock protein 105 protein_id : NP_038587.2

name	EG433968 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82900057 GeneID:433968 MGI:3648428
definition	codon_start : 1 product : similar to nucleoside diphosphate kinase B protein_id : XP_485703.2

name	B3galtl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487081 GeneID:381694 MGI:2685903
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : beta 1,3-galactosyltransferase-like protein_id : NP_001074673.1

name	LOC100040089 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254786 GeneID:100040089
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474115.1

name	Rxfp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17978288 CCDS:CCDS19886.1 GeneID:140498 MGI:2153463
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016500 - protein-hormone receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G protein coupled receptor affecting testicular descent; G protein-coupled receptor 106 product : leucine-rich repeat-containing G protein-coupled receptor 8 protein_id : NP_536716.1

name	Fry (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254793 GeneID:320365 MGI:2443895
definition	codon_start : 1 product : furry homolog protein_id : XP_001477878.1

name	LOC100042068 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254795 GeneID:100042068
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477893.1

name	Gm5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82900065 GeneID:194292 MGI:2684851
definition	codon_start : 1 product : hypothetical protein LOC194292 protein_id : XP_110552.4

name	XM_359419 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82900067 GeneID:545824 MGI:3690051
definition	codon_start : 1 product : similar to zygote arrest 1-like protein protein_id : XP_359419.4

name	Brca2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487409 GeneID:12190 MGI:109337
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0003697 - single-stranded DNA binding [Evidence ISS] GO_process : GO:0006338 - chromatin remodeling [Evidence ISS]; GO:0006281 - DNA repair [Evidence IEA]; GO:0000724 - double-strand break repair via homologous recombination [Evidence ISS] [Evidence IDA]; GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence ISS]; GO:0007093 - mitotic checkpoint [Evidence ISS]; GO:0007090 - regulation of S phase of mitotic cell cycle [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence TAS] codon_start : 1 product : breast cancer 2 protein_id : NP_001074470.1

name	Brca2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487411 GeneID:12190 MGI:109337
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0003697 - single-stranded DNA binding [Evidence ISS] GO_process : GO:0006338 - chromatin remodeling [Evidence ISS]; GO:0006281 - DNA repair [Evidence IEA]; GO:0000724 - double-strand break repair via homologous recombination [Evidence ISS] [Evidence IDA]; GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence ISS]; GO:0007093 - mitotic checkpoint [Evidence ISS]; GO:0007090 - regulation of S phase of mitotic cell cycle [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence TAS] codon_start : 1 product : breast cancer 2 protein_id : NP_033895.2

name	B230342M21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78126153 CCDS:CCDS19887.1 GeneID:100637 MGI:2140872
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC100637 protein_id : NP_598659.2

name	BC037393 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41235761 CCDS:CCDS19888.1 GeneID:381695 MGI:2687207
definition	codon_start : 1 note : protein from BCRA2 region product : hypothetical protein LOC381695 protein_id : NP_958757.1

name	Aprin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66955886 GeneID:100710 MGI:2140945
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0042127 - regulation of cell proliferation [Evidence ISS] codon_start : 1 product : androgen-induced prostate proliferative shutoff associated protein AS3 protein_id : NP_780519.3

name	LOC100040180 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254788 GeneID:100040180
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474278.1

name	Kl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7705570 CCDS:CCDS19889.1 GeneID:16591 MGI:1101771
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004566 - beta-glucuronidase activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0015926 - glucosidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA] GO_process : GO:0007568 - aging [Evidence IMP]; GO:0006112 - energy reserve metabolism [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation function : involved in regulation of ageing note : secreted form of Klotho protein product : klotho protein_id : NP_038851.1

name	Stard13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734987 CCDS:CCDS19890.1 GeneID:243362 MGI:2385331
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : serologically defined colon cancer antigen 28 product : serologically defined colon cancer antigen 13 protein_id : NP_666370.2

name	LOC100040037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040037
definition	number : 3 pseudo : _no_value

name	LOC100040037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040037
definition	number : 2 pseudo : _no_value

name	LOC100040037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040037
definition	number : 1 pseudo : _no_value

name	LOC100040062 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040062
definition	number : 1 pseudo : _no_value

name	LOC667470 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667470
definition	number : 1 pseudo : _no_value

name	LOC667470 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667470
definition	number : 2 pseudo : _no_value

name	LOC667470 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667470
definition	number : 3 pseudo : _no_value

name	LOC667510 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254789 GeneID:667510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins product : similar to neural precursor cell expressed, developmentally down-regulated gene 1 pseudo : _no_value transcript_id : XR_031666.1

clone name	MSMg01-294F02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-526M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501I20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-187M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516A14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-159M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398E19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-147C17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-365K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-162M16.b	B6Ng01-162M16.g
ACC	DH955539	DH955540
length	1,238	469
definition	DH955539\|Mus musculus domesticus DNA, BAC clone: B6Ng01-162M16, 5' end.	DH955540\|Mus musculus domesticus DNA, BAC clone: B6Ng01-162M16, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctgctcgctccagtcaaccccactcattctgattggccccgctcc ctcaggcccaaagatttatttcttagtatatataagtacactgtagctgt cttcacacacaccagaagagggcgtcagatctcattatggatggttgtga gccaccatgtgattgctgggatttaaactcaggacctctggaagagcagt cagtgctcttaaccactgagccatctctccagccccacgttaatcatttc cttttttttgttaaattcatttttaaattttatatatgtactatatttat atcatttcccccttcctctcttccctccaaccttccccatgccccctccc caaaacatggctgcttttccttttattagatttatttattttcttttatg tgtgtgcgtgttttgcctgtgtatcagtgtgtgcacagttgctctcctag tgcccatggagttcagatgatggcatcagagcctttggaacaggaattgt gagcttctatgtggctgctgggtcctcaacaagtgctcttaactacagag ccatctctccactctgcccctgctgagccatctctcagcaattaatttat ttttcaattattattgtgtgtaataatatcagtcttggggagacatctaa ttctactttaaaatgcattttaatgggagaagccttttcccagaacttgc tattgtggaaaatacttcccaacaaataccggtaaaaaatctgaattcta ccttggttcttcacttggcttcagcgcctctgagagcctgtcagagggag cagcttagtgacctgagcaagtcctgccccagacgtgcaattgcagctgt gaaccaagggttgtcctaggaaactgtgggaaagcattcagtgctatgtg agcaatagttgatacgatgatattctacatttctccctgtagctctggga tgttagacactgtctcaagatgcgcatctataataagtcactggggagga atttaggtgaagagccggtgcatgccacatgccttagtacaggggcattg cctagagtttagaactttaccgcaccagaggcctccttatatgtcgttca aatttgcctggtatcccctaccatccctccatctttaaaggaccgaaagc cagtttatatatatccgccacatgcaggccttgccttgaaacacatggca atagagtcctttttagacattgtatttgttttttgaga	attatgtaggtcaggctggcctcaactcacagcgatcaatttgccaaaca ttagatagagctcggggagtcttatggaagagttgggggaaggactgagg cacctgaagaggacagggactccacaggaaatccaacagagtcaactaac ctggacctttgagggctcccagaatctgaaccactaaccagagggtgagc atgagttacacctaggtcccccacccttcaccatacacatgcagcagatg tatagtttcgtcttcatgcaggtcccccaacaactggagcaggagctgtc cttgaatctgttgcctgactgtggatcccattcccctaactgggctgcct tgtctggcctcagtggaagaagatgtgtctagtcctgcaatgagttcata tcctggggggaagggggaagctacctatagcagggcttcccttctcggag gagaaggagggggggggag
quality values	Open. Hide. 53 53 17 29 57 38 33 24 39 53 50 30 39 50 50 39 23 52 53 47 36 55 55 61 55 47 43 12 11 14 5 5 15 8 8 10 21 25 25 55 40 55 61 61 61 61 59 59 61 61 61 61 61 59 59 61 61 61 61 59 61 59 61 59 59 61 61 61 61 61 49 36 29 21 22 18 28 29 41 39 41 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 59 61 59 61 59 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 59 59 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 59 61 61 61 59 61 59 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 44 55 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 52 55 61 55 61 61 61 61 55 55 55 52 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 43 37 34 26 21 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 53 47 47 53 53 13 23 10 10 14 21 61 61 61 61 61 61 61 50 53 61 61 61 61 53 61 61 61 50 50 50 47 45 50 61 61 61 61 53 61 61 61 61 61 61 61 61 61 50 53 42 50 61 61 61 61 61 61 53 42 13 12 8 8 10 10 61 52 61 52 53 61 61 61 53 53 53 47 47 53 45 53 57 53 40 53 57 57 45 42 40 57 40 53 53 38 14 14 7 8 12 10 47 45 40 42 27 47 47 34 53 57 57 45 53 45 38 53 57 45 45 57 45 57 52 50 45 57 43 42 53 22 57 57 47 39 53 52 45 35 57 57 53 50 52 47 46 53 53 53 45 50 57 32 43 43 38 57 57 37 50 57 50 37 45 57 43 32 47 57 53 38 42 30 52 52 52 27 52 39 41 52 57 45 38 37 36 47 46 50 57 52 42 52 38 31 57 35 38 40 45 46 45 53 12 10 41 53 53 57 52 28 53 33 22 52 46 42 41 45 32 33 50 53 36 30 43 52 20 32 50 34 33 14 25 44 42 38 40 40 47 39 42 52 31 35 38 24 34 53 42 50 50 37 52 21 57 21 53 19 25 48 34 39 32 19 34 5 46 38 31 15 40 32 22 35 37 27 19 6 31 32 15 12 30 33 38 33 14 44 25 33 32 37 22 20 11 11 7 36 53 30 15 10 22 15 16 20 29 31 26 25 31 11 14 27 13 17 25 30 29 25 32 30 29 13 30 14 29 15 57 40 33 16 32 15 31 23 28 30 18 10 14 45 26 19 29 33 25 24 51 19 31 47 28 15 15 29 44 17 15 10 17 24 33 32 34 20 30 28 31 28 32 16 20 8 6 8 14 6 21 27 25 29 16 13 22 19 18 11 25 29 24 16 12 11 12 17 13 18 21 28 51 43 44 16 20 48 37 21 29 22 37 18 27 25 29 28 29 39 26 21 14 35 14 28 29 7 29 8 12 22 12 39 14 12 10 23 28 13 10 29 16 28 23 8 18 23 20 11 9 11 7 18 10 6 7 5 13 13 24 28 23 28 31 29 31 6 21 5 31 16 20 5 22 28 26 7 8 10 25 10 5 6 10 6 7 13 23 21 12 27 31 31 24 33 17 22 8 7 10 6 46 12 9 43 28 24 19 31 11 7 7 12 21 32 17 23 22 12 8 20 6 5 11 20 17 33 23 19 51 16 26 5 5 32 9 16 31 14 8 6 6 18 16 12 6 12 19 17 19 17 13 8 9 24 17 9 34 8 8 11 30 7 10 4 12 11 12 20 23 14 19 14 8 10 7 10 19 8 7 12 10 17 8 6 8 7 30 30 6 5 17 20 15 12 7 7 8 7 10 7 7 6 4 6 32 14 17 35 22 10 8 15 6 9 6 31 28 20 5 8 5 8 3 5 29 13 11 4 4 6 4 6 13 6 7 6 3 3 5 5 3 3 4 6 3 4 4 9 14 9 7 8 20 10 23 7 10 24 11 26 8 14 8 12 16 5 5 4 3 3 11 7 20 8 23 4 5 7 11 3 4 36 1 12 11 5 5 9 5 12 9 6 5 9 14 27 12 9 5 8 24 29 13 18 5 6 9 8	Open. Hide. 14 14 12 9 8 8 10 5 9 8 19 18 24 27 59 59 61 61 61 59 59 59 59 49 52 59 59 61 59 61 61 59 61 61 59 61 59 59 59 61 61 61 61 45 30 18 22 24 31 21 28 29 28 36 59 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 44 55 61 59 61 61 61 61 59 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 59 55 61 61 61 59 55 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 59 59 59 59 61 61 59 61 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 50 53 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 33 37 47 47 53 53 47 42 47 46 47 47 47 42 47 42 42 34 15 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_150995710_150996918
seq2: B6Ng01-162M16.b_47_1284

seq1  GAATTCTGCTCGCTCCAGTCAACCCCACTCACTCTGATTGGCCCCGCTCC  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAATTCTGCTCGCTCCAGTCAACCCCACTCATTCTGATTGGCCCCGCTCC  50

seq1  CTCAGGCCCAAAGATTTATTTCTTAGTATATATAAGTACACTGTAGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCCCAAAGATTTATTTCTTAGTATATATAAGTACACTGTAGCTGT  100

seq1  CTTCACACACACCAGAAGAGGGCGTCAGATCTCATTATGGATGGTTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACACACACCAGAAGAGGGCGTCAGATCTCATTATGGATGGTTGTGA  150

seq1  GCCACCATGTGATTGCTGGGATTTAAACTCAGGACCTCTGGAAGAGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATGTGATTGCTGGGATTTAAACTCAGGACCTCTGGAAGAGCAGT  200

seq1  CAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCACGTTAATCATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCACGTTAATCATTTC  250

seq1  CTTTTTTTTGTTAAATTCATTTTTAAATTTTATATATGTACTATATTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTGTTAAATTCATTTTTAAATTTTATATATGTACTATATTTAT  300

seq1  ATCATTTCCCCCTTCCTCTCTTCCCTCCAACCTTCCCCATGCCCCCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCCCCCTTCCTCTCTTCCCTCCAACCTTCCCCATGCCCCCTCCC  350

seq1  CAAAACATGGCTGCTTTTCCTTTTATTAGATTTATTTATTTTCTTTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATGGCTGCTTTTCCTTTTATTAGATTTATTTATTTTCTTTTATG  400

seq1  TGTGTGCGTGTTTTGCCTGTGTATCAGTGTGTGCACAGTTGCTCTCCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCGTGTTTTGCCTGTGTATCAGTGTGTGCACAGTTGCTCTCCTAG  450

seq1  TGCCCATGGAGTTCAGATGATGGCATCAGAGCCTTTGGAACAGGAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGGAGTTCAGATGATGGCATCAGAGCCTTTGGAACAGGAATTGT  500

seq1  GAGCTTCTATGTGGCTGCTGGGTCCTCAACAAGTGCTCTTAACTACAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTCTATGTGGCTGCTGGGTCCTCAACAAGTGCTCTTAACTACAGAG  550

seq1  CCATCTCTCCACTCTGCCCCTGCTGAGCCATCTCTCAGCAATTAATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTCCACTCTGCCCCTGCTGAGCCATCTCTCAGCAATTAATTTAT  600

seq1  TTTTCAATTATTATTGTGTGTAATAATATCAGTCTTGGGGAGACATCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATTATTATTGTGTGTAATAATATCAGTCTTGGGGAGACATCTAA  650

seq1  TTCTACTTTAAAATGCATTTTAATGGGAGAAGCCTTTTCCCAGAACTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTTAAAATGCATTTTAATGGGAGAAGCCTTTTCCCAGAACTTGC  700

seq1  TATTGTGGAAAATACTTCCCAACAAATACCGGTAAAAAATCTGAATTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGAAAATACTTCCCAACAAATACCGGTAAAAAATCTGAATTCTA  750

seq1  CCTTGGTTCTTTCACTTGGCTTCAGCGCCTCTGAGAGCCTGTCAGAGGGA  800
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTC-TTCACTTGGCTTCAGCGCCTCTGAGAGCCTGTCAGAGGGA  799

seq1  GCAGCTTAGTGACCTGAGCAAGTCCTGCCCCAGACGTGCAATTGCAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTAGTGACCTGAGCAAGTCCTGCCCCAGACGTGCAATTGCAGCTG  849

seq1  TGAACCAAGGGTTGTCCTAGGAAACTGT-GGAAAGCATTCAGTGCTATGT  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGAACCAAGGGTTGTCCTAGGAAACTGTGGGAAAGCATTCAGTGCTATGT  899

seq1  GAGC-ATAGTTGATACGATGATA-TCTACATTTCTCCCTGTAGCTCTGGG  947
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGCAATAGTTGATACGATGATATTCTACATTTCTCCCTGTAGCTCTGGG  949

seq1  ATGTTAGACACTGTCTCAAGATGCGCATCTATAAAACAAGTCACT-GGGA  996
      ||||||||||||||||||||||||||||||||  || |||||||| ||||
seq2  ATGTTAGACACTGTCTCAAGATGCGCATCTAT--AATAAGTCACTGGGGA  997

seq1  GGAATT--AGTGAGATGCCGGTGCATGCCACA-GGCTTAGTACA-GGGCA  1042
      ||||||   ||||   |||||||||||||||| | ||||||||| |||||
seq2  GGAATTTAGGTGAAGAGCCGGTGCATGCCACATGCCTTAGTACAGGGGCA  1047

seq1  -TGGCTAGAGTTAAGAAC-TTAGCGCA-CAGAGGC--TCTTATAATGTCG  1087
       || |||||||| ||||| ||| |||| |||||||   ||||| ||||||
seq2  TTGCCTAGAGTTTAGAACTTTACCGCACCAGAGGCCTCCTTAT-ATGTCG  1096

seq1  TTCAAA--TGCCT-GTATCCCC-ACCATCC--TCATC-TTAAAG--ACGA  1128
      ||||||  ||||| |||||||| |||||||   |||| ||||||   |||
seq2  TTCAAATTTGCCTGGTATCCCCTACCATCCCTCCATCTTTAAAGGACCGA  1146

seq1  AAGCAAGT---TATATATACG-CACATGCA-GCCTTGCC-TGATACACAT  1172
      |||| |||   ||||||| || |||||||| |||||||| ||| ||||||
seq2  AAGCCAGTTTATATATATCCGCCACATGCAGGCCTTGCCTTGAAACACAT  1196

seq1  -GCAATAGATTCTTTTTTTG--CTTG--TTTGTTTTTTGAGA  1209
       |||||||| || ||||| |   |||  ||||||||||||||
seq2  GGCAATAGAGTCCTTTTTAGACATTGTATTTGTTTTTTGAGA  1238

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information