BAC Information

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BAC

Clone NameB6Ng01-163A21
Chromosome5 (Build37)
Map Location 97,761,102 - 97,909,245
singlet/doubletdoublet
Overlap geneEG666293, C80008, Gk2
Upstream geneFras1, Anxa3, EG666266, LOC670358, Bmp2k, Paqr3, LOC100040598, EG433923
Downstream geneAntxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5, 1700007G11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163A21.bB6Ng01-163A21.g
ACCDH955737DH955738
length7771,137
definitionDH955737|Mus musculus domesticus DNA, BAC clone: B6Ng01-163A21, 5' end.DH955738|Mus musculus domesticus DNA, BAC clone: B6Ng01-163A21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,761,102 - 97,761,877)(97,908,115 - 97,909,245)
sequence
gaattcctctccccctactcctagttcctcccaccaccctttgcctctgg
atccaccctctgtctctctttacaaaacaagcaggcatctaaggaataat
aataacgataaaacaaaataagataaatagaaaaataaatgaatttaaat
atgacaaaacaaccaagtaagaaaaagaagccatttttcagtaccagtac
tgactggatactttagtctcctgcctgctttatctaacacccgccggaaa
ggccactgactgcctgaaactcacaaacctactcaattttgcaagcaaaa
tttcacctaagcaagaaacagatgaacaacaacagctccctccccctccc
acagtgcatagttctacagtgtttcatttttctgagttgggaattagacc
acttcagaattaacccctcaggaacaacaacaaatggccgttggcaaaca
gatattacaatcccagaatttggcaagcaaaaatatgtccatgtctatgc
agacgctttgtcaaatacaacccggacaagagctcaacctagagagcata
cagttcatgaatcacacagacttgctttgcctccatccaatttcagccca
ggcatgtccattctttgtttcaaagatttctttctttccttagttaacgt
taacatgctccctgcccccacccctgctgccaggagtctgtctgaaagtc
ccgccaagtcttccagtcttttcccattaatgtctctggggctgggggat
tggggactggggatgggggggttggaa
gaattctttgaattttaaggttcactgctctcctgcacttaatttgtacc
ttgaacctgctagtatcctagagaaatacttgacccatgaatgtgctagt
aaactagagaaatacttgaccacaagccttccaaggacaaaacagtgact
gatttgtccttggaaatgctggcatttagctctttagtttgtacataaaa
tttaaatagcaccagaagactataatctcagggatcatttctatagtttg
caaaatagcaatcagatcttaagttaactcttgaataattctttccataa
ggaagaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagatcccaattcttgtttataaactatgctatgtaattatagagca
atcaaaaccataatggtcaaaatagaaaacaaaaggaggaactggagact
cagactggggaggtctattagagaaggttctggtggtttcaataaaaatg
gctcccatagactcatacatttgaatgtttggtatcagggggagcagtgc
ttgagaaggattagaaggaataggaggggtggctttgttcaaagaggcgg
agccttgttggaggaagtgtgtcactagatgtagtatttgagacttaaaa
agcccaagccaggcacagcatctctcatggcctatacataaggacgtagc
tcttagctactcctccagtaccttaccagccagccaccctgttcccttgt
catgatgataatgagctaagtctctgaagcagtgtaccagctttccccac
cctcacgcaccccctcacacactgtattaaatgctgcatgtcctttagga
gagttgctgtggtcatggtatctcttcacagcaacagaacaatgaatgcg
acagaggtgattcttgagctgatgttaagatcaagcccttagttaggttg
agagaaggtagaggcaacatacatctgagagagcatcttcttacagaact
cagaaggacaacgctttggacttagttctggaacacagtgatgtgaggag
atgaagtgttgactacatggcatcccagttgatgcttagaggaggaagaa
agcctcaccataacagagtgtttacagaagtgtttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_97761102_97761877
seq2: B6Ng01-163A21.b_43_819

seq1  GAATTCCTCTCCCCCTACTCCTAGTTCCTCCCACCACCCTTTGCCTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCCCCCTACTCCTAGTTCCTCCCACCACCCTTTGCCTCTGG  50

seq1  ATCCACCCTCTGTCTCTCTTTACAAAACAAGCAGGCATCTAAGGAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCTCTGTCTCTCTTTACAAAACAAGCAGGCATCTAAGGAATAAT  100

seq1  AATAACGATAAAACAAAATAAGATAAATAGAAAAATAAATGAATTTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACGATAAAACAAAATAAGATAAATAGAAAAATAAATGAATTTAAAT  150

seq1  ATGACAAAACAACCAAGTAAGAAAAAGAAGCCATTTTTCAGTACCAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAAACAACCAAGTAAGAAAAAGAAGCCATTTTTCAGTACCAGTAC  200

seq1  TGACTGGATACTTTAGTCTCCTGCCTGCTTTATCTAACACCCGCCGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGATACTTTAGTCTCCTGCCTGCTTTATCTAACACCCGCCGGAAA  250

seq1  GGCCACTGACTGCCTGAAACTCACAAACCTACTCAATTTTGCAAGCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTGACTGCCTGAAACTCACAAACCTACTCAATTTTGCAAGCAAAA  300

seq1  TTTCACCTAAGCAAGAAACAGATGAACAACAACAGCTCCCTCCCCCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCTAAGCAAGAAACAGATGAACAACAACAGCTCCCTCCCCCTCCC  350

seq1  ACAGTGCATAGTTCTACAGTGTTTCATTTTTCTGAGTTGGGAATTAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCATAGTTCTACAGTGTTTCATTTTTCTGAGTTGGGAATTAGACC  400

seq1  ACTTCAGAATTAACCCCTCAGGAACAACAACAAATGGCCGTTGGCAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGAATTAACCCCTCAGGAACAACAACAAATGGCCGTTGGCAAACA  450

seq1  GATATTACAATCCCAGAATTTGGCAAGCAAAAATATGTCCATGTCTATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTACAATCCCAGAATTTGGCAAGCAAAAATATGTCCATGTCTATGC  500

seq1  AGACGCTTTGTCAAATACAACCCGGACAAGAGCTCAACCTAGAGAGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCTTTGTCAAATACAACCCGGACAAGAGCTCAACCTAGAGAGCATA  550

seq1  CAGTTCATGAATCACACAGACTTGCTTTGCCTCCATCCAATTTCAGCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCATGAATCACACAGACTTGCTTTGCCTCCATCCAATTTCAGCCCA  600

seq1  GGCATGTCCATTCTTTGTTTCAAAGATTTCTTTCTTTCCTTAGTTAACGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTCCATTCTTTGTTTCAAAGATTTCTTTCTTTCCTTAGTTAACGT  650

seq1  TAACATGCTCCCTGCCCCCACCCCTGCTGCCAGGAGTCTGTCTGAAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGCTCCCTGCCCCCACCCCTGCTGCCAGGAGTCTGTCTGAAAGTC  700

seq1  CCGCCAAGTCTTCCAGTCTTTTCCCATTAATGTCTCTGGGGCTGGGGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCAAGTCTTCCAGTCTTTTCCCATTAATGTCTCTGGGGCTGGGGGAT  750

seq1  TGGGGACTGGGGAT-GGGGGGTTGGAA  776
      |||||||||||||| ||||||||||||
seq2  TGGGGACTGGGGATGGGGGGGTTGGAA  777

seq1: chr5_97908115_97909245
seq2: B6Ng01-163A21.g_65_1201 (reverse)

seq1  TCAAACAC-TCTGT-AACACTCTG-TAT-GTGAAGCTTTCTTCCT-CTCT  45
      |||||||| ||||| ||||||||| ||| |||| ||||||||||| ||||
seq2  TCAAACACTTCTGTAAACACTCTGTTATGGTGAGGCTTTCTTCCTCCTCT  50

seq1  -AGCATCATACTGGGATGCCCTGTAGTC-ACACTTCATCTCCTCACATCA  93
       ||||||| ||||||||||| ||||||| |||||||||||||||||||||
seq2  AAGCATCA-ACTGGGATGCCATGTAGTCAACACTTCATCTCCTCACATCA  99

seq1  CTGTGTT-CAGAACTAAGTCCCAAGCGTTGTCCTTCTGAGTTCTGT-AGA  141
      ||||||| ||||||||||||| |||||||||||||||||||||||| |||
seq2  CTGTGTTCCAGAACTAAGTCCAAAGCGTTGTCCTTCTGAGTTCTGTAAGA  149

seq1  GATTGCTCTCTCAGATTGTATGTTGCCTCTACCTTCTCTCAACCTAACTA  191
         |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGATGCTCTCTCAGA-TGTATGTTGCCTCTACCTTCTCTCAACCTAACTA  198

seq1  AGGGCTTGATCTTTAACATCAGCTCAAGAATCACCTCTGTCGCATTCATT  241
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTGATC-TTAACATCAGCTCAAGAATCACCTCTGTCGCATTCATT  247

seq1  GTTCTGTTGCTGTGAAGAGATACCATGACCACAGCAACTCTCCTAAAGGA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTGCTGTGAAGAGATACCATGACCACAGCAACTCTCCTAAAGGA  297

seq1  CATGCAGCATTTAATACAGTGTGTGAGGGGGTGCGTGAGGGTGGGGAAAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGCATTTAATACAGTGTGTGAGGGGGTGCGTGAGGGTGGGGAAAG  347

seq1  CTGGTACACTGCTTCAGAGACTTAGCTCATTATCATCATGACAAGGGAAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACACTGCTTCAGAGACTTAGCTCATTATCATCATGACAAGGGAAC  397

seq1  AGGGTGGCTGGCTGGTAAGGTACTGGAGGAGTAGCTAAGAGCTACGTCCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGCTGGCTGGTAAGGTACTGGAGGAGTAGCTAAGAGCTACGTCCT  447

seq1  TATGTATAGGCCATGAGAGATGCTGTGCCTGGCTTGGGCTTTTTAAGTCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATAGGCCATGAGAGATGCTGTGCCTGGCTTGGGCTTTTTAAGTCT  497

seq1  CAAATACTACATCTAGTGACACACTTCCTCCAACAAGGCTCCGCCTCTTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTACATCTAGTGACACACTTCCTCCAACAAGGCTCCGCCTCTTT  547

seq1  GAACAAAGCCACCCCTCCTATTCCTTCTAATCCTTCTCAAGCACTGCTCC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAGCCACCCCTCCTATTCCTTCTAATCCTTCTCAAGCACTGCTCC  597

seq1  CCCTGATACCAAACATTCAAATGTATGAGTCTATGGGAGCCATTTTTATT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATACCAAACATTCAAATGTATGAGTCTATGGGAGCCATTTTTATT  647

seq1  GAAACCACCAGAACCTTCTCTAATAGACCTCCCCAGTCTGAGTCTCCAGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACCAGAACCTTCTCTAATAGACCTCCCCAGTCTGAGTCTCCAGT  697

seq1  TCCTCCTTTTGTTTTCTATTTTGACCATTATGGTTTTGATTGCTCTATAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTTTGTTTTCTATTTTGACCATTATGGTTTTGATTGCTCTATAA  747

seq1  TTACATAGCATAGTTTATAAACAAGAATTGGGATCTTTCTTTCTTTCTTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAGCATAGTTTATAAACAAGAATTGGGATCTTTCTTTCTTTCTTT  797

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTATGGAAAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCTTATGGAAAG  847

seq1  AATTATTCAAGAGTTAACTTAAGATCTGATTGCTATTTTGCAAACTATAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCAAGAGTTAACTTAAGATCTGATTGCTATTTTGCAAACTATAG  897

seq1  AAATGATCCCTGAGATTATAGTCTTCTGGTGCTATTTAAATTTTATGTAC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATCCCTGAGATTATAGTCTTCTGGTGCTATTTAAATTTTATGTAC  947

seq1  AAACTAAAGAGCTAAATGCCAGCATTTCCAAGGACAAATCAGTCACTGTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAGAGCTAAATGCCAGCATTTCCAAGGACAAATCAGTCACTGTT  997

seq1  TTGTCCTTGGAAGGCTTGTGGTCAAGTATTTCTCTAGTTTACTAGCACAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTGGAAGGCTTGTGGTCAAGTATTTCTCTAGTTTACTAGCACAT  1047

seq1  TCATGGGTCAAGTATTTCTCTAGGATACTAGCAGGTTCAAGGTACAAATT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGTCAAGTATTTCTCTAGGATACTAGCAGGTTCAAGGTACAAATT  1097

seq1  AAGTGCAGGAGAGCAGTGAACCTTAAAATTCAAAGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCAGGAGAGCAGTGAACCTTAAAATTCAAAGAATTC  1137