MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-163B04
Chromosome	5 (Build37)
Map Location	41,770,962 - 41,772,061
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC208522
Downstream gene	Rab28, Bapx1, A230054D04Rik, LOC384308, LOC100040588
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC208522 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:208522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 441 ESTs, 12 Proteins pseudo : _no_value

name	Rab28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100972 MGI:1917285
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bapx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12020 MGI:108015
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A230054D04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665775 MGI:2444804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC384308 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384308
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100040588 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Rab28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892420 GeneID:100972 MGI:1917285
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB28, member RAS oncogene family transcript_id : NM_027295.2

name	Bapx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87252734 GeneID:12020 MGI:108015
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bagpipe homeobox gene 1 homolog (Drosophila) transcript_id : NM_007524.2

name	A230054D04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487264 GeneID:665775 MGI:2444804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A230054D04 gene transcript_id : NM_001081422.1

name	Rab28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037191 CCDS:CCDS19258.1 GeneID:100972 MGI:1917285
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : RAB28, member RAS oncogene family protein_id : NP_081571.1

name	Bapx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680766 CCDS:CCDS19259.1 GeneID:12020 MGI:108015
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP] codon_start : 1 exception : mismatches in translation note : homeodomain protein Nkx-3.2; homeobox product : bagpipe homeobox gene 1 homolog protein_id : NP_031550.1

name	A230054D04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487265 GeneID:665775 MGI:2444804
definition	codon_start : 1 note : family with sequence similarity 44, member A product : hypothetical protein LOC665775 protein_id : NP_001074891.1

name	LOC384308 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384308
definition	number : 1 pseudo : _no_value

name	LOC100040588 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040588
definition	number : 1 pseudo : _no_value

name	LOC100040588 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040588
definition	number : 2 pseudo : _no_value

name	LOC100040588 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040588
definition	number : 3 pseudo : _no_value

name	LOC208522 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253885 GeneID:208522
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 441 ESTs, 12 Proteins product : similar to 60S ribosomal protein L7 pseudo : _no_value transcript_id : XR_032934.1

clone name	MSMg01-159P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-175K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349J05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-163B04.b	B6Ng01-163B04.g
ACC	DH955751	DH955752
length	1,250	1,087
definition	DH955751\|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B04, 5' end.	DH955752\|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B04, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgtttagcgctgtaccccattttttaataagcctatttggtt ctctggattctaacttcttgagttctttgtatatattggatattagccct ctgtcagatttaagattggcaaagatctttccccaatctgttggttgctt tttggtcttattgacagtgtcttttgccttacagaacctttgcaatttta tgaggtcccatttgtcaattcttgatcttaaagcacacgccattgctgtt ctgtccaggaaatttttccctgtgaccatatcttcaaggctcttccccac tttctcctctataagtttcaatgtctcttgtttcgtgtgaaggtccttga tccacttggacttgagctttgtacaaggaaataagatcggattgattcga attcttctacatgttaaccaccagttgagccagcaccatttgttgaaaat gctgtctgttttccactgggtggttttagctcccttgttgaagaccaagt gactataggtgtgtggattcatttctgtgtcttcagtcctattccattga tccacctatttgtcactgtaccagtaccatgtagtttttgataacaattg ctctgtagtgtagcgtgaggtcagaaatggtaattccaccagaagtttct ttattgttgagattaatttttgctatactaggttttttgttattcaagat gaatttgcaaattgccctttctaacacagttaagaattgagttggaattt tgatggggatttcactgaatctctagattgattttggcacaatgtttgtt tttactatattaatcctgccaatccatgagcatcagagatctttccatct tctgagatcttagatttctttcttcagagacttgaagttcttatcatata ggtctttcacttgcttacttagagtcacaccaaggtattttatagtattt tgtgactattgtaaagggtgttatttcccttaatttctttctcagtctgt ttatccttttttgtagatgaaggcccactgatttgaatgtgttattttaa tatcaagctactttggtaagttgtttatcagttaagaaccttctctggtg gaattgggggtcattaaattatacattatcactgcaaaaggataatttgg actcccatttcaattaccttgtcctttggcatgctggcggactcagctaa tgtaggagtgataatgagaaaagggtgtgacctcggttctcgagagagtc	gaattcattggatatgcctgttaatggaacacgtgtaataatactaaagc ctgtgattaaaaagaaatttaaggcccatgagtttttagtagaaaagcat gtcatttgagtgtttatttgctggtataaaatgggtgatttttttttaag ggaggggcttccctattgcagtttcaggaagaccaaactattcatgcaga aagctggcgatgcagcccggttgtagagaaccatctggagaaagtagaag ctatttgtatccttatgcagcaacagaaaatgcactgcagtgcatttctg ctcatgctgatagtttattcacttaaaatttaatttgttatcatttatca aggcagaggagtaggctgggattcaaagctgaacaccattggcccttgaa gacacatagctttggatggcccacagtttgttgaaggaaagaaacataaa ggaatactgtggaaaacactctctgaaggaggcatggcaaaagcaaaggg ctatatcaggaggaatagagggcttccaaagagaggatgaatttaatcca ggcctgatcttgtccgtgattccaaggccattccaagatggatgcagatt caagttgtctgaggaccaagatgtgtttgagggtaaactctaagtaatct ttgcctttggaaaagaagtgttagtcactaaaaaaaatattggctcagat cacacactcctacatttattctttagtttacacaaagttgatattcattt tcatgaatgcatgcaccacatttgcacatacatgtatgcatctaatattc cttggtgtacatttctttgaatttttttttttttttacattttggtaaga tttaatcatccacattattttatagtgaggtgtagaaagttctgcatgta aaatgaaactagttgatttggctttccagaggtttgcctgtgggttttta aagtctttcgattttccagggacgtttgcataattcctctacaatcctat ttattctttcgaatggaaaggagaacaatcggctttgggtttcatgactg ggagaaccaactcctgcatgttttggacctagagtaa
quality values	Open. Hide. 61 47 35 38 61 53 61 61 61 43 61 61 55 47 47 47 49 49 61 61 61 61 61 61 43 12 9 13 18 19 24 59 32 30 36 36 36 37 41 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 59 36 44 37 59 52 52 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 59 59 61 59 61 61 61 61 59 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 55 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 41 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 47 61 47 61 61 61 61 61 45 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 53 61 61 38 53 57 53 52 57 50 57 57 53 57 57 57 57 57 57 57 53 53 42 45 57 53 43 57 57 57 57 53 57 57 57 57 42 57 50 53 57 42 47 38 47 57 53 57 47 38 46 38 53 45 42 57 47 24 28 57 42 38 53 43 36 53 53 47 28 28 37 34 53 57 57 47 57 57 52 53 40 57 44 38 36 47 41 53 52 36 57 38 41 29 52 52 53 33 57 57 57 57 52 35 52 45 50 45 52 47 41 33 37 30 57 41 52 57 53 41 34 50 39 33 40 42 42 52 50 52 30 35 52 45 40 57 41 34 50 45 57 37 39 57 53 32 41 46 42 57 37 53 42 50 44 50 42 50 34 52 57 33 39 41 24 53 40 25 52 52 52 40 53 53 42 35 30 31 36 57 57 52 44 40 27 52 41 46 44 29 13 57 40 39 37 40 41 52 37 52 37 53 40 43 40 40 30 26 18 51 53 33 28 57 57 40 57 47 30 36 40 22 30 30 53 30 53 43 41 28 57 51 51 30 28 48 29 29 31 44 44 27 27 40 31 34 34 28 31 24 38 27 44 30 30 44 29 28 36 30 13 48 31 34 28 28 28 43 18 23 25 31 33 51 41 29 29 24 29 31 15 29 30 27 27 38 28 34 12 29 28 43 23 14 15 6 10 20 33 28 51 39 39 29 36 24 20 19 46 18 34 18 27 40 30 31 39 27 28 26 36 26 27 27 28 24 21 28 29 27 15 26 22 22 34 27 51 29 29 31 35 30 25 38 33 26 24 20 30 30 30 34 21 30 23 30 41 28 31 28 31 40 18 13 25 29 7 11 10 51 51 28 23 10 11 14 19 24 9 38 38 9 17 9 12 27 27 19 25 23 14 33 28 28 51 29 22 51 25 15 22 14 22 25 23 44 22 17 34 30 5 9 20 33 17 35 20 30 24 44 23 28 24 34 28 28 25 20 9 20 14 29 12 15 17 25 16 6 30 26 18 15 6 7 5 9 9 33 16 10 25 31 13 13 29 36 26 18 13 17 30 26 18 33 27 15 17 23 15 14 5 18 17 5 4 4 30 34 14 6 5 8 9 13 12 8 8 10 26 23 20 25 10 27 23 10 23 6 12 10 5 16 4 5 9 27 14 9 7 11 4 4 2 5 5 4 5 4 7 4 8 21 8 13 6 12 10 26 7 7 4 13 7 7 16 22 4 24 30 30 27 6 9 4 10 22 3 17 9 13 7 10 4 4 17 14 9 16 4 3 4 5 5 6 13 11 13 19 9 8 13 7 6 6 5 7 17 5 11 6 11 13 9 5 4 5 3 3 5 21 5 15 3 5 4 3 1 4 4 2 3 6 4 17 18 8 14 15 4 4 4 13 4 5 15 4 9 8 6 6 4 5 5 6 6 12 4 4 1 3 3 19 3 1 11 1 14 4 10 4 6 9 4 13 6 6 4 17 4 12 24 7 4 13 12 13 9 13 4 9 5 20 20 4 4 20 8 13 11 4 10 4 4 4 4 8 4 7 10 18 5	Open. Hide. 61 61 55 49 61 13 14 14 13 18 7 13 20 14 7 32 30 43 59 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 39 45 52 41 37 41 41 36 43 44 59 59 59 59 55 59 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 55 59 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 52 61 55 55 61 55 61 61 52 61 55 55 61 61 61 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 53 47 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 53 47 61 61 52 61 61 47 35 61 61 61 50 61 61 53 61 61 42 61 45 61 61 61 61 50 61 52 61 47 24 47 61 53 43 61 61 53 61 61 57 47 52 53 57 53 53 53 57 53 53 53 57 57 57 52 53 57 52 53 53 40 38 52 53 57 27 53 53 51 28 47 30 47 53 53 47 33 53 53 53 38 57 47 47 43 53 53 53 45 42 25 47 52 35 42 36 50 57 38 30 32 25 32 43 14 47 37 32 53 37 53 42 57 42 57 42 47 34 52 57 45 53 33 57 52 36 52 57 53 52 52 52 53 42 52 45 37 24 42 38 43 30 32 38 53 50 53 38 50 50 43 26 47 53 57 57 28 52 53 31 35 36 29 57 50 50 45 50 34 50 35 22 57 46 57 41 41 57 47 32 37 38 53 57 57 50 57 53 53 24 47 32 53 57 53 57 53 57 53 57 48 57 36 52 43 27 40 52 31 31 30 52 53 52 52 40 37 35 53 57 48 36 52 36 52 33 33 35 31 33 33 40 41 27 34 40 28 43 32 32 57 57 29 40 27 35 23 25 44 34 37 32 21 35 37 36 32 48 48 30 32 28 25 51 46 29 35 28 48 22 40 32 44 22 31 47 28 48 32 30 30 28 34 48 29 29 48 29 30 28 34 48 39 22 34 26 30 28 28 17 32 38 32 29 51 41 30 20 51 36 29 44 31 18 51 51 51 51 51 51 51 51 51 46 39 43 51 39 32 33 21 28 51 43 25 30 41 19 38 31 23 41 21 51 23 24 29 19 38 23 33 43 43 23 41 22 38 31 30 27 51 51 31 28 25 30 34 33 38 28 28 43 15 41 16 22 15 43 51 33 16 18 25 22 15 21 28 22 28 29 23 29 51 51 29 16 30 25 51 24 28 25 36 28 28 18 21 18 9 22 25 5 9 24 25 51 28 17 28 9 6 26 11 23 24 38 14 17 26 33 23 29 14 22 39 39 13 39 42 39 4 6 31 28 6 6 8 15 34 12 13 14 34 22 44 44 28 12 27 10 15 34 13 17 13 17 14 42 22 29 24 14 16 21 31 17 17 27 17 17 13 6 10 17 17 26 12 14 23 24 17 7 42 27 6 5 10 14 9 37 14 27 8 17 5 5 10 9 7 30 14 26 11 11 10 15 25 10 6 30 4 14 6 11 9 13 30 10 12 25 18 5 25 15 23 11 8 25 8 20 11 25 27 15 20 5 10 5 3 8 11 4 1 2 7 5 9 19 16 5 3 3 3 22 20 13 12 9 7 8 14 13 12 4 12 3 3 3 21

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_41770962_41772061
seq2: B6Ng01-163B04.g_69_1155 (reverse)

seq1  TTACTCTAGTGTCCCAAAAACATGCAGAGATTTTGTGTCTCCCAGGTCCA  50
      ||||||||| ||||  ||||||||||| || || || ||||||||   ||
seq2  TTACTCTAG-GTCC--AAAACATGCAG-GAGTTGGT-TCTCCCAG--TCA  43

seq1  TGAAACCCAAAGCCGGTTTGTTCTCCTTTCCATTTCGAAAG-ATAAATAG  99
      |||||||||||||| | ||||||||||||||| |||||||| ||||||||
seq2  TGAAACCCAAAGCC-GATTGTTCTCCTTTCCA-TTCGAAAGAATAAATAG  91

seq1  GATTTGTAGAGGAATTATGCAAACGTTCCCTGGAAAATCGAAAGACTTTT  149
      || |||||||||||||||||||||| ||||||||||||||||||||  ||
seq2  GA-TTGTAGAGGAATTATGCAAACG-TCCCTGGAAAATCGAAAGAC--TT  137

seq1  TAAAAACCCACAGGCAAACCTCTGGAAAGCCAAAATCAACTAGTTTCATT  199
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAAAAACCCACAGGCAAACCTCTGGAAAGCC-AAATCAACTAGTTTCATT  186

seq1  TTACATGCAGAACTTTCTACACCTCACTATAAAATAATGTGGATGATTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGCAGAACTTTCTACACCTCACTATAAAATAATGTGGATGATTAA  236

seq1  ATCTTACCAAAATGTAAAAAAAAAAAAAAATTCAAAGAAATGTACACCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACCAAAATGTAAAAAAAAAAAAAAATTCAAAGAAATGTACACCAA  286

seq1  GGAATATTAGATGCATACATGTATGTGCAAATGTGGTGCATGCATTCATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTAGATGCATACATGTATGTGCAAATGTGGTGCATGCATTCATG  336

seq1  AAAATGAATATCAACTTTGTGTAAACTAAAGAATAAATGTAGGAGTGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATATCAACTTTGTGTAAACTAAAGAATAAATGTAGGAGTGTGT  386

seq1  GATCTGAGCCAATATTTTTTTTAGTGACTAACACTTCTTTTCCAAAGGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAGCCAATATTTTTTTTAGTGACTAACACTTCTTTTCCAAAGGCA  436

seq1  AAGATTACTTAGAGTTTACCCTCAAACACATCTTGGTCCTCAGACAACTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTACTTAGAGTTTACCCTCAAACACATCTTGGTCCTCAGACAACTT  486

seq1  GAATCTGCATCCATCTTGGAATGGCCTTGGAATCACGGACAAGATCAGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGCATCCATCTTGGAATGGCCTTGGAATCACGGACAAGATCAGGC  536

seq1  CTGGATTAAATTCATCCTCTCTTTGGAAGCCCTCTATTCCTCCTGATATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTAAATTCATCCTCTCTTTGGAAGCCCTCTATTCCTCCTGATATA  586

seq1  GCCCTTTGCTTTTGCCATGCCTCCTTCAGAGAGTGTTTTCCACAGTATTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTGCTTTTGCCATGCCTCCTTCAGAGAGTGTTTTCCACAGTATTC  636

seq1  CTTTATGTTTCTTTCCTTCAACAAACTGTGGGCCATCCAAAGCTATGTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTTTCTTTCCTTCAACAAACTGTGGGCCATCCAAAGCTATGTGT  686

seq1  CTTCAAGGGCCAATGGTGTTCAGCTTTGAATCCCAGCCTACTCCTCTGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGGGCCAATGGTGTTCAGCTTTGAATCCCAGCCTACTCCTCTGCC  736

seq1  TTGATAAATGATAACAAATTAAATTTTAAGTGAATAAACTATCAGCATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAATGATAACAAATTAAATTTTAAGTGAATAAACTATCAGCATGA  786

seq1  GCAGAAATGCACTGCAGTGCATTTTCTGTTGCTGCATAAGGATACAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAATGCACTGCAGTGCATTTTCTGTTGCTGCATAAGGATACAAATA  836

seq1  GCTTCTACTTTCTCCAGATGGTTCTCTACAACCGGGCTGCATCGCCAGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTACTTTCTCCAGATGGTTCTCTACAACCGGGCTGCATCGCCAGCT  886

seq1  TTCTGCATGAATAGTTTGGTCTTCCTGAAACTGCAATAGGGAAGCCCCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATGAATAGTTTGGTCTTCCTGAAACTGCAATAGGGAAGCCCCTC  936

seq1  CCTTAAAAAAAAATCACCCATTTTATACCAGCAAATAAACACTCAAATGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAAAAAAATCACCCATTTTATACCAGCAAATAAACACTCAAATGA  986

seq1  CATGCTTTTCTACTAAAAACTCATGGGCCTTAAATTTCTTTTTAATCACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTTCTACTAAAAACTCATGGGCCTTAAATTTCTTTTTAATCACA  1036

seq1  GGCTTTAGTATTATTACACGTGTTCCATTAACAGGCATATCCAATGAATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTAGTATTATTACACGTGTTCCATTAACAGGCATATCCAATGAATT  1086

seq1  C  1100
      |
seq2  C  1087

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information