BAC Information

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BAC

Clone NameB6Ng01-163C14
Chromosome5 (Build37)
Map Location 98,063,634 - 98,064,779
singlet/doubletsinglet
Overlap genenone
Upstream geneFras1, Anxa3, EG666266, LOC670358, Bmp2k, Paqr3, LOC100040598, EG433923, EG666293, C80008, Gk2
Downstream geneAntxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5, 1700007G11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163C14.bB6Ng01-163C14.g
ACCDH955817DH955818
length1,1821,157
definitionDH955817|Mus musculus domesticus DNA, BAC clone: B6Ng01-163C14, 5' end.DH955818|Mus musculus domesticus DNA, BAC clone: B6Ng01-163C14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcagtgaaattctcacaccagtc
agaatggctaagatcaaaaattcaggtgacagcagatgctggtgaggatg
tggagaaagaggaacactcctccattgttggtgggattgcaagcttgtac
aaccactctggaaatcagtctggcggttcctcagaaaattggacataatt
ctaccggaggatccctaaatacctctcctgggcatatatgcagaagacat
cccaaccagtaagaaggacacatgctccactatgttcatagcagccttat
ttataatagccagaagctggaaaaacccagatgcccctcaacagaggaat
ggatacaaaaaatgtggtacatttacacaatggtgtactactcagctatt
aaaaagaatgaatttatgaaattcctaggcaaatggttgtacctggaggg
catcatcctgagtgaggtaacccaatcacaaaagaactcaaatgataggt
actcactgataagtggatattagcccagaaacttagtatagccgagatat
aagaggcaatttgtaaaacacatgaaactgaagaagaacgaagaccaaag
tgaggacactgtgtcccatcttagaattggaaacaatcacccatggaagg
aattacagagacaaagtttggagctgtgacgaaaggatggaccatctaga
gactgccatatccagggatccatcccataattagcctccaaacgatgaca
ccatcgcatacactagcaagcgtttgctgaaaggaccctgatatagctgt
ctcttgtgagactatgccggggcctagcaaacacataagaggatgctcaa
agtcagctattggatggatcacagggccccaattgaggagctagagaaag
taaccaaggagcttaagagatctgcaaccctgtaggtgcaacaacattat
gactaaacagtaccctggagcttcttgactctagccgcatatgtatcaaa
agatggcttagtcgtccatcactggaaagaagaggccatggaacacgcaa
actttttattgcccaagtcaagggaaaccacagggccaaaaatggtaatt
gggtggctagggatggggggggtgggggggaa
gaattcaccccttctgcacagtgttagttctacaacccataatcagaacc
tgctaggttcattatttccaaagttgcctaatttatctccttgtgtctaa
tcttgatttcatcaaatccatcctgtgtgtaacagccttaaaaaaaatca
gtgtaaatcatcgaattgttctttcttggatgctcgtcaaagaggaagag
catagctagcttattcaatattccatccctgatatccaaacactgcttga
cagaaagtgggcgtaagataattatttgttaaaggggtggatatatggtt
caaatcccccctggggacccccttcaccatgcagataccagacctagact
ggagagttcacagctaccagcttcctagtataggtaacacaagctgtctt
tcttaccattgtgcagtggggtttcctaatttgactagtgcctataatct
gcacattagtttctgcaatgccctttaggtctgtacactgaagaagccac
agattacttaatgaaacaacataatgtctgggtttcttgctctattgatg
tgacaattttgttttactttcttttgtcctttctcaagtattactgccag
attaccctccctccttggtatctacaggaaggcgcgctttgcttcggcta
aggaaagttttagattactgggtacttaagatcgttgttgccctcattgg
cttactttgtatccatttgtgcaccattcttcattcctagcccatagaaa
ggctgccttagctgttcagggttggagatgtgatttaatcctctttgaat
tctcattataaatatcattccctatcagcttgttgaatgaataaatgaag
cctgaattagacaaaaattagttaaagcccagattagaatatatttatgc
ctttgtagcgtttgtgctttcaaagtaagattcttccctcatgacaattg
tctcaatgagcaatataataaaacatgcacgttaacttgagcagtcagat
cacatttaaacatttatatttttggcctttctcagaagttgcccaggaat
ttctaacaacttaagtttgcttgcatctgttatcaaaaacataagctttc
gtccataccaatcaaatactggacacctccataaaatgaaaaaggatcag
ggggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_98063634_98064779
seq2: B6Ng01-163C14.g_69_1225

seq1  GAATTCACCCCTTCTGCACAGTGTTAGTTCTACAACCCATAATCAGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCCTTCTGCACAGTGTTAGTTCTACAACCCATAATCAGAACC  50

seq1  TGCTAGGTTCATTATTTCCAAAGTTGCCTAATTTATCTCCTTGTGTCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGTTCATTATTTCCAAAGTTGCCTAATTTATCTCCTTGTGTCTAA  100

seq1  TCTTGATTTCATCAAATCCATCCTGTGTGTAACAGCCTTAAAAAAAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATTTCATCAAATCCATCCTGTGTGTAACAGCCTTAAAAAAAATCA  150

seq1  GTGTAAATCATCGAATTGTTCTTTCTTGGATGCTCGTCAAAGAGGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAATCATCGAATTGTTCTTTCTTGGATGCTCGTCAAAGAGGAAGAG  200

seq1  CATAGCTAGCTTATTCAATATTCCATCCCTGATATCCAAACACTGCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTAGCTTATTCAATATTCCATCCCTGATATCCAAACACTGCTTGA  250

seq1  CAGAAAGTGGGCGTAAGATAATTATTTGTTAAAGGGGTGGATATATGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTGGGCGTAAGATAATTATTTGTTAAAGGGGTGGATATATGGTT  300

seq1  CAAATCCCCCCTGGGGACCCCCTTCACCATGCAGATACCAGACCTAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCCCCCTGGGGACCCCCTTCACCATGCAGATACCAGACCTAGACT  350

seq1  GGAGAGTTCACAGCTACCAGCTTCCTAGTATAGGTAACACAAGCTGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTTCACAGCTACCAGCTTCCTAGTATAGGTAACACAAGCTGTCTT  400

seq1  TCTTACCATTGTGCAGTGGGGTTTCCTAATTTGACTAGTGCCTATAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCATTGTGCAGTGGGGTTTCCTAATTTGACTAGTGCCTATAATCT  450

seq1  GCACATTAGTTTCTGCAATGCCCTTTAGGTCTGTACACTGAAGAAGCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTAGTTTCTGCAATGCCCTTTAGGTCTGTACACTGAAGAAGCCAC  500

seq1  AGATTACTTAATGAAACAACATAATGTCTGGGTTTCTTGCTCTATTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACTTAATGAAACAACATAATGTCTGGGTTTCTTGCTCTATTGATG  550

seq1  TGACAATTTTGTTTTACTTTCTTTTGTCCTTTCTCAAGTATTACTGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATTTTGTTTTACTTTCTTTTGTCCTTTCTCAAGTATTACTGCCAG  600

seq1  ATTACCCTCCCTCCTTGGTATCTACAGGAAGGCGCGCTTTGCTTCGGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCCTCCCTCCTTGGTATCTACAGGAAGGCGCGCTTTGCTTCGGCTA  650

seq1  AGGAAAGTTTTAGATTACTGGGTACTTAAGATCGTTGTTGCCCTCATTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGTTTTAGATTACTGGGTACTTAAGATCGTTGTTGCCCTCATTGG  700

seq1  CTTACTTTGTATCCATTTGTGCACCATTCTTCATTCCTAGCCCATAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTGTATCCATTTGTGCACCATTCTTCATTCCTAGCCCATAGAAA  750

seq1  GGCTGCCTTAGCTGTTCAGGGTTGGAGATGTGATTTAATCCTCTTTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTTAGCTGTTCAGGGTTGGAGATGTGATTTAATCCTCTTTGAAT  800

seq1  TCTCATTATAAATATCATTCCCTATCAGCTTGTTGAATGAATAAATGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTATAAATATCATTCCCTATCAGCTTGTTGAATGAATAAATGAAG  850

seq1  CCTGAATTAGACAAAAATTAGTTAAAGCCAAGATTAGAATATATTTATGC  900
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCTGAATTAGACAAAAATTAGTTAAAGCCCAGATTAGAATATATTTATGC  900

seq1  CTTTGTAGCGTTTGTGCTTTCAAAGTTAAGATTCTTCCCTCATGACAATT  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTTTGTAGCGTTTGTGCTTTCAAAG-TAAGATTCTTCCCTCATGACAATT  949

seq1  GTCTCAATGAGCAATATAATAAAACATGCACGTTAACTTGAGCAGTCAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAATGAGCAATATAATAAAACATGCACGTTAACTTGAGCAGTCAGA  999

seq1  TCACATTTAAACA-TTATATTTTT-GCCTTTCTCAGAAGGTGCCCAGGAT  1048
      ||||||||||||| |||||||||| |||||||||||||| ||||||||| 
seq2  TCACATTTAAACATTTATATTTTTGGCCTTTCTCAGAAGTTGCCCAGGAA  1049

seq1  TTTCTAAC-ACTT-AGTTTGCTGGCATCTGTAATC-AAAACATTAGCTTT  1095
      |||||||| |||| |||||||| |||||||| ||| ||||||| ||||||
seq2  TTTCTAACAACTTAAGTTTGCTTGCATCTGTTATCAAAAACATAAGCTTT  1099

seq1  CGTCCATACCAATCAAATACT-GACAC--TCATAA----TAGAAGAGTCA  1138
      ||||||||||||||||||||| |||||   |||||     | |||  |||
seq2  CGTCCATACCAATCAAATACTGGACACCTCCATAAAATGAAAAAGGATCA  1149

seq1  GGGGGTTG  1146
      ||||||||
seq2  GGGGGTTG  1157