MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-163H22
Chromosome	5 (Build37)
Map Location	63,553,674 - 63,554,815
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Centd1
Downstream gene	3110047P20Rik, LOC100042133, 0610040J01Rik, AA536743, LOC100041636, LOC100041646, Pgm1, Tbc1d1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Centd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212285 MGI:2684416
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 75 ESTs, 11 Proteins

name	3110047P20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319807 MGI:1920464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 3 Proteins

name	LOC100042133 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042133
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	0610040J01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76261 MGI:1923511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AA536743 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100532 MGI:2140767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041636 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100041646 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Pgm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66681 MGI:97564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbc1d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57915 MGI:1889508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Centd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374749 GeneID:212285 MGI:2684416
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 75 ESTs, 11 Proteins product : centaurin, delta 1, transcript variant 1 transcript_id : XM_132099.9

name	3110047P20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253931 GeneID:319807 MGI:1920464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 3 Proteins product : RIKEN cDNA 3110047P20 gene transcript_id : XM_132047.7

name	0610040J01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803576 GeneID:76261 MGI:1923511
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610040J01 gene transcript_id : NM_029554.3

name	AA536743 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348252 GeneID:100532 MGI:2140767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AA536743 transcript_id : NM_145923.4

name	LOC100041646 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253904 GeneID:100041646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041646 transcript_id : XM_001476747.1

name	Pgm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130267 GeneID:66681 MGI:97564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoglucomutase 1 transcript_id : NM_025700.2

name	Tbc1d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120587002 GeneID:57915 MGI:1889508
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 1 transcript_id : NM_019636.2

name	Centd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82897442 GeneID:212285 MGI:2684416
definition	codon_start : 1 product : centaurin, delta 1 isoform 1 protein_id : XP_132099.8

name	3110047P20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253932 GeneID:319807 MGI:1920464
definition	codon_start : 1 product : hypothetical protein LOC319807 protein_id : XP_132047.6

name	0610040J01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981329 GeneID:76261 MGI:1923511
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC76261 protein_id : NP_083830.2

name	AA536743 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625912 GeneID:100532 MGI:2140767
definition	codon_start : 1 product : hypothetical protein LOC100532 protein_id : NP_666035.2

name	LOC100041646 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253905 GeneID:100041646
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476797.1

name	Pgm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859686 CCDS:CCDS19300.1 GeneID:66681 MGI:97564
definition	GO_function : GO:0004614 - phosphoglucomutase activity [Evidence IDA] codon_start : 1 note : phosphoglucomutase 2 product : phosphoglucomutase 1 protein_id : NP_079976.1

name	LOC100041636 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041636
definition	number : 2 pseudo : _no_value

name	LOC100041636 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041636
definition	number : 1 pseudo : _no_value

name	LOC100042133 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253933 GeneID:100042133
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to HN1 pseudo : _no_value transcript_id : XR_033603.1

clone name	MSMg01-356B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501N19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-113G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545O24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-354P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076B02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-079K03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-403N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514P04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-457L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-163H22.b	B6Ng01-163H22.g
ACC	DH956066	DH956067
length	1,263	1,134
definition	DH956066\|Mus musculus domesticus DNA, BAC clone: B6Ng01-163H22, 5' end.	DH956067\|Mus musculus domesticus DNA, BAC clone: B6Ng01-163H22, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctataaaaatcattaagtcacctaaacaacattatttcactaaag ttcatcttcatgttgatctgcaagaaatttacccaatagggtacactaat acccaggaatacatcataacagcctatagacagaatcactccatatcaga aaaatgaggactacagcaatgacaaatatgagaaggcacatcaggagcaa gaagcaatctggaacaaagactcctgggcctgtacctttccagaattcac tcattgcagccatacaaaatggacagtttccagtaagctcacttgtccac tgcagctcctcctgcatggcatcttccaaactagtgctcttttcttcttt attttttgtcattgatttatttgtttattcattttacattctgatctcag cacccatctccttctggtgccccttcacataactcatcccccacccctcc ctttcttctctaataagagtaaggcttccagggcaccaacctaccctggc acattaagtctttgcaggagtagacacaatctttcccactgaagccagaa aaagcagtcagttaggggaacaagactcacaagcagaccacagactcagt gatagtttcagcaacagctgtttggggacccacatgaagaccaagctgca catatgctacatatgtgcagggagcccatgtccaacccatgtatgctctt tcattggtgattcagtctctggaagtccctaatggtctaggatagttgac tctgtttgatcttcttgtggaatccctatcccctttggaaactttaatcc ctcttcccacccacttttccacaagactctgaactcagtctaatgtttag ctgtggttctctgcttctgtttccatttgcttctgggtgaagactcccag cggacagatatactacgttcctgtctgccagtgagctttcttattccatt gagagatagaatgaattggaagaaagctctatgagctccagagtgcattt tatctgcctctgttacaccattgtaatcctttcctgttatctatagattg atttactatctctactcctcaactctaaacctctaatattcctattaatt ataataatttataattatatgattgtatatcgaatacatacaaattttca cactgccctggtggaaataagagatgtatttaccggttttctccttcgat tagatattttcttcttaaatctcgaaggcaactacccccgagagaccctt tcttttattctca	gaattctttggtaggatttcacactggaaatagttttctttacagagtat ggtgatatacaccaattatcccaagtgttctggtgcagagtagaagaacc tttagttgctttcagccctgcctgtgctagatggcaagacaaatgggtaa ataagtaaatgcaaatgtatagctttcataactgtgacaatgtattgctt gtatcatccatcaattgatgctatgtgaaatacacgttgattacaggaat actttttctgggcattcctatgaaacaacattgcatatgagagatttctt catatggctggagacaataagcaagagaagaatttttagaggcaaccatg gaatgatttatgaagttatatgcatgaccatgagagtgggaacttctgtt tcattttctcctctattctcaggaccatgttcactgccagaagtgagcaa gaattcaataaaaacctgtcagatgatgatgaaatgaacaaacaaaataa taagggaaatgtagccttaatatctgtgcttccttctgggaattttgtcc ttctgtccctttgctagtactccccaaaactgttgtgtggaatttctcat tgtacttttacatcatccttattgccctgtgcatttaatccttttctgcc atgctcctatttttctgtggctccttgcttttctgtttcatctttttgtt gtgatataattttagaaatgttaacccaatattctgtaggaataataata ataataataataataaatcttcttatactgcaatacatcacctgaaagtc tatactaaactcaagccaagacatttactctcaataaatgtagaaactta taaggacattaaccaggatgataatatgcaggaaaaggaagtacatgaga aagaacatgagtgggacctatgactgcacttctttctgccctttctccaa agtggctatttactgcagactcggcaggaaatagagcacttccacttaag tttactaaagatatcagaaaacacagaatacttggttttcataagtctag tgaaatggtacaattagggcaactaaatttaaaatttttttacattggct ggaaaagagattcaaaaatctaatggttcttaat
quality values	Open. Hide. 57 29 24 40 61 61 61 42 61 50 50 50 50 47 36 47 50 47 61 55 61 61 61 47 55 61 15 12 10 8 10 11 9 10 8 9 15 32 50 55 55 61 43 55 59 61 59 59 59 61 61 59 59 59 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 52 41 36 41 59 41 43 52 59 61 61 61 61 61 59 55 55 59 59 55 55 55 59 61 59 61 59 59 44 59 59 61 61 61 59 55 55 61 61 61 59 59 59 59 59 59 59 59 59 61 59 59 59 59 59 59 59 59 49 61 59 59 59 61 59 59 59 52 59 59 59 59 59 59 61 61 59 59 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 59 61 61 61 61 61 61 61 59 59 59 59 61 59 59 59 59 59 59 52 36 61 61 59 59 59 59 59 61 59 52 59 59 52 59 59 59 59 61 61 59 59 59 59 59 59 61 59 59 59 59 59 55 59 61 59 59 59 61 59 59 59 61 61 59 61 59 59 59 59 61 61 59 59 59 59 59 59 59 59 61 59 61 59 59 59 61 61 59 61 59 61 59 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 59 59 59 59 61 59 59 59 59 55 61 59 59 59 59 61 61 61 59 59 59 61 61 61 61 61 61 61 59 59 59 59 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 55 61 61 61 55 61 61 55 55 61 55 61 61 61 61 61 61 61 61 61 61 61 55 55 61 55 55 61 55 55 55 61 50 50 50 49 50 49 50 61 61 55 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 50 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 37 61 61 61 61 61 61 61 61 61 53 61 61 50 61 61 53 61 50 61 61 53 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 53 61 61 53 53 61 61 61 61 61 61 61 61 47 53 61 46 47 47 61 61 61 61 61 61 61 53 43 53 57 53 53 53 57 57 50 53 52 57 53 57 53 57 57 45 53 53 47 50 53 57 46 53 53 53 50 53 57 39 43 57 53 47 57 57 53 43 52 53 50 57 53 43 53 53 57 57 53 57 53 57 57 47 47 30 23 57 53 45 46 50 53 53 57 47 42 53 32 47 47 47 33 53 57 53 45 33 47 45 53 45 52 57 46 46 52 50 42 47 45 53 50 47 53 43 32 47 46 41 37 39 47 57 46 30 45 53 39 52 53 20 46 32 41 43 30 50 57 48 52 41 53 42 53 53 42 57 52 50 30 38 43 52 38 34 46 41 26 52 38 33 39 42 53 44 53 42 53 53 38 53 30 40 29 57 52 42 38 50 38 57 57 28 42 40 38 23 50 35 14 50 38 37 52 38 42 26 47 53 38 22 5 57 12 33 29 20 37 35 39 52 24 23 53 32 41 28 40 34 27 36 57 52 32 35 40 53 57 57 37 40 57 37 39 23 32 57 37 34 30 57 32 28 39 33 45 57 53 48 44 35 44 38 57 40 29 24 57 35 23 38 44 57 57 33 29 39 26 34 29 33 37 38 14 44 29 29 24 26 30 29 36 21 18 35 25 48 32 28 34 28 48 29 51 33 40 32 36 33 40 28 48 46 28 32 29 28 44 28 33 31 28 32 23 23 33 15 46 27 29 37 23 28 51 47 34 28 31 33 29 24 39 51 34 28 28 28 27 13 29 18 29 31 51 34 27 23 29 25 29 33 19 27 24 28 13 15 18 25 36 29 29 34 29 28 27 32 22 19 27 21 28 30 38 26 31 34 28 33 34 38 22 28 33 51 34 23 25 29 28 12 33 23 26 24 28 39 31 28 18 19 4 25 15 20 23 29 30 17 23 18 22 21 17 18 18 21 23 13 29 43 32 9 15 28 26 34 24 28 21 30 12 20 24 23 33 17 25 51 14 15 28 23 33 23 51 51 13 15 16 29 20 30 30 25 17 17 5 8 14 24 13 15 14 7 10 7 21 8 29 10 28 27 9 12 15 7 38 27 6 22 17 35 12 16 31 16 8 5 15 14 22 8 18 14 11 28 27 24 35 23 6 17 12 14 8 4 10 19 13 6 4 7 16 11 8 15 13 13 7 4 8 15 22 30 16 7 6 11 17 3 4 6 5 4 4 3 3 6 5 21 22 29 4 7 26 14 21 5 5 11 16 13 5 4 23 5 4 3 4 3 4 6 10 4 4 14 8 3 4 6 20 5 5 5 14 11 26 11 24 6 17 5 6 5 5 6 21 15 13 9 14 25 24 6 5 4 9 7 24 7 11 9 25 21 6 9 5 4 4 6 25 24 3 5 4 5 6 4 2 4 6 14 2 4 3 13 6 4 5 3 4 4 8 11 11 18 10 7 11 3 3 3 3 5 7 2 2 4 4 3 4 4 5 24 11 3 12 8 4 21 4 4 19 13 8 3 6 4 10 6 16 8 6 6 7 17 4 5 4 6 11 23 13 12 9 3 6 6 5 5 3 5 3 2 3 8 4 11 5 10 14 13 4 16 4 3 10 11 4	Open. Hide. 55 61 31 47 61 15 20 13 8 9 6 16 10 10 21 18 20 43 52 49 49 61 55 61 61 59 44 32 59 59 59 59 59 55 61 61 59 61 61 61 61 59 61 59 59 61 59 59 59 43 59 41 31 30 28 49 39 45 61 61 59 61 61 59 59 59 61 61 55 55 55 61 59 59 59 59 61 61 61 61 61 61 59 59 61 61 59 52 61 59 59 59 52 61 59 59 61 61 61 61 61 59 59 59 49 59 59 61 59 61 59 61 61 52 52 59 61 61 61 61 61 59 59 61 59 59 59 59 52 44 59 59 61 61 59 59 59 59 61 61 59 59 59 61 61 61 61 59 59 61 61 61 61 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 59 59 55 59 59 61 61 61 59 61 61 61 61 61 61 59 61 61 59 59 59 59 61 59 59 59 59 59 52 61 61 59 61 61 61 61 61 61 61 59 61 59 59 59 59 37 59 59 59 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 59 61 59 61 61 59 59 61 59 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 52 55 55 52 55 55 61 52 55 52 61 49 61 55 52 55 55 61 61 61 55 52 49 52 61 52 61 55 52 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 55 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 50 50 47 50 53 53 61 61 61 50 43 61 53 50 53 61 61 53 61 53 53 50 61 47 61 61 61 50 50 53 61 61 61 61 61 61 61 61 61 61 61 53 50 61 47 61 61 47 50 61 47 50 61 50 50 61 61 61 61 61 50 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 53 53 53 53 61 61 61 61 50 57 57 53 57 57 57 53 47 57 53 57 57 57 57 32 27 57 57 57 53 45 57 57 53 57 57 57 53 45 57 57 53 57 57 57 57 53 57 53 43 52 52 57 57 57 57 57 53 30 57 57 57 53 53 57 38 57 53 39 53 38 57 53 52 53 40 57 57 57 50 53 52 53 57 57 45 50 53 57 57 57 53 45 53 45 41 57 45 53 57 52 47 38 53 36 57 53 53 57 57 50 53 50 53 52 38 57 57 42 50 57 47 57 53 52 57 57 57 52 34 35 31 53 21 34 57 42 38 53 57 45 52 52 57 57 57 53 53 53 53 42 57 53 45 41 41 41 45 36 39 32 52 57 57 52 53 37 52 25 57 52 38 36 42 57 36 57 57 57 52 30 16 33 52 21 40 50 42 53 38 41 33 19 57 57 57 57 37 40 53 35 37 31 22 27 38 24 30 57 53 17 57 39 47 40 36 57 42 52 37 52 35 37 40 53 30 34 37 37 33 29 33 31 33 36 40 40 37 57 40 38 53 40 26 33 40 40 48 57 44 31 57 40 37 53 19 40 29 37 24 38 33 48 29 25 23 30 24 31 20 48 38 32 29 24 21 38 44 44 25 18 29 33 32 29 30 24 41 34 32 45 30 30 32 30 33 31 30 40 44 19 26 20 31 27 18 31 51 29 26 37 29 34 39 33 20 31 30 30 45 23 29 39 20 28 21 29 51 31 36 24 39 21 29 27 29 10 12 24 26 9 13 35 29 27 30 43 28 33 27 26 20 26 35 11 18 27 29 23 14 18 25 12 21 7 12 39 51 41 14 26 23 39 22 28 22 29 14 31 30 33 12 30 51 39 9 22 31 27 19 31 29 35 19 21 34 51 28 21 20 34 29 23 27 23 28 24 21 23 22 14 31 22 25 31 23 41 32 20 18 14 16 51 39 22 46 26 21 19 19 36 11 51 29 25 31 34 39 23 28 22 30 51 15 14 28 21 34 9 8 6 28 23 30 19 10 21 17 23 30 17 38 51 30 11 7 6 5 7 19 30 8 15 9 35 23 13 26 9 10 32 20 14 39 44 28 9 18 12 13 39 9 14 11 10 7 19 16 15 12 33 44 25 16 8 4 10 8 9 23 21 15 11 10 8 25 21 21 12 22 13 10 11 8 13 6 11 6 5 4 10 17 9 29 14 26 23 13 7 19 9 9 11 9 3 7 4 4 7 12 34 15 17 24 9 16 6 19 12 23 6 24 15 3 5 4 7 19 27 36 31 18 30 7 9 12 4 9 13 5 11 11 9 16 10 26 36 35 4 13 7 15 6 4 5 7 13 30 30 30 24 7 14 14 15 15 5 16 13 4 7 6 4 3 5 6 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_63553674_63554815
seq2: B6Ng01-163H22.g_67_1200

seq1  GAATTCTTTGGTAGGATTTCACACTGGAAATAGTTTTCTTTACAGAGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTAGGATTTCACACTGGAAATAGTTTTCTTTACAGAGTAT  50

seq1  GGTGATATACACCAATTATCCCAAGTGTTCTGGTGCAGAGTAGAAGAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATATACACCAATTATCCCAAGTGTTCTGGTGCAGAGTAGAAGAACC  100

seq1  TTTAGTTGCTTTCAGCCCTGCCTGTGCTAGATGGCAAGACAAATGGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGCTTTCAGCCCTGCCTGTGCTAGATGGCAAGACAAATGGGTAA  150

seq1  ATAAGTAAATGCAAATGTATAGCTTTCATAACTGTGACAATGTATTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAAATGCAAATGTATAGCTTTCATAACTGTGACAATGTATTGCTT  200

seq1  GTATCATCCATCAATTGATGCTATGTGAAATACACGTTGATTACAGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATCCATCAATTGATGCTATGTGAAATACACGTTGATTACAGGAAT  250

seq1  ACTTTTTCTGGGCATTCCTATGAAACAACATTGCATATGAGAGATTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCTGGGCATTCCTATGAAACAACATTGCATATGAGAGATTTCTT  300

seq1  CATATGGCTGGAGACAATAAGCAAGAGAAGAATTTTTAGAGGCAACCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGCTGGAGACAATAAGCAAGAGAAGAATTTTTAGAGGCAACCATG  350

seq1  GAATGATTTATGAAGTTATATGCATGACCATGAGAGTGGGAACTTCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATTTATGAAGTTATATGCATGACCATGAGAGTGGGAACTTCTGTT  400

seq1  TCATTTTCTCCTCTATTCTCAGGACCATGTTCACTGCCAGAAGTGAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCTCCTCTATTCTCAGGACCATGTTCACTGCCAGAAGTGAGCAA  450

seq1  GAATTCAATAAAAACCTGTCAGATGATGATGAAATGAACAAACAAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAAAACCTGTCAGATGATGATGAAATGAACAAACAAAATAA  500

seq1  TAAGGGAAATGTAGCCTTAATATCTGTGCTTCCTTCTGGGAATTTTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAAATGTAGCCTTAATATCTGTGCTTCCTTCTGGGAATTTTGTCC  550

seq1  TTCTGTCCCTTTGCTAGTACTCCCCAAAACTGTTGTGTGGAATTTCTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCCTTTGCTAGTACTCCCCAAAACTGTTGTGTGGAATTTCTCAT  600

seq1  TGTACTTTTACATCATCCTTATTGCCCTGTGCATTTAATCCTTTTCTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTTTACATCATCCTTATTGCCCTGTGCATTTAATCCTTTTCTGCC  650

seq1  ATGCTCCTATTTTTCTGTGGCTCCTTGCTTTTCTGTTTCATCTTTTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCTATTTTTCTGTGGCTCCTTGCTTTTCTGTTTCATCTTTTTGTT  700

seq1  GTGATATAATTTTAGAAATGTTAACCCAATATTCTGTAGGAATAATAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATAATTTTAGAAATGTTAACCCAATATTCTGTAGGAATAATAATA  750

seq1  ATAATAATAATAATAAATCTTCTTATACTGCAATACATCACCTGAAAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATAATAAATCTTCTTATACTGCAATACATCACCTGAAAGTC  800

seq1  TATACTAAACTCAAGCCAAGACATTTACTCTCAATAAATGTAGAAACTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAAACTCAAGCCAAGACATTTACTCTCAATAAATGTAGAAACTTA  850

seq1  TAAGGACATTAACCAGGATGATAATATGCAGGAAAAGGAAGTACATGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACATTAACCAGGATGATAATATGCAGGAAAAGGAAGTACATGAGA  900

seq1  AAGAACATGAGTGGGACCTATGACTGCACTTCTTTCTGCCCTTTCTCCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATGAGTGGGACCTATGACTGCACTTCTTTCTGCCCTTTCTCCAA  950

seq1  AGTGGCTATTTACTGCAGACTCGGCAGGAAAATAGAGCAACTCCACTAAG  1000
      |||||||||||||||||||||||||||| ||||||||||  |||||| | 
seq2  AGTGGCTATTTACTGCAGACTCGGCAGG-AAATAGAGCACTTCCACTTAA  999

seq1  TTTTACTAAAGATATCAGAAAACACAGAATACTTGGTTTTCATAAAGTCT  1050
       |||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTTTACTAAAGATATCAGAAAACACAGAATACTTGGTTTTCAT-AAGTCT  1048

seq1  AGTTGAAAATGGTACAATTAGGGCAACTAAAATTTAAACATTTTTTTACA  1100
      |||   |||||||||||||||||||||| ||||||||| |||||||||||
seq2  AGT--GAAATGGTACAATTAGGGCAACT-AAATTTAAA-ATTTTTTTACA  1094

seq1  TT-GCTGGAAAAAAGGAGTCAAAAAAATCTAATGGTTCATAAT  1142
      || ||||||||| | || ||  |||||||||||||||| ||||
seq2  TTGGCTGGAAAAGA-GATTC--AAAAATCTAATGGTTCTTAAT  1134

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information