BAC Information

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BAC

Clone NameB6Ng01-163M23
Chromosome5 (Build37)
Map Location 59,656,532 - 59,657,201
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041385, LOC100041396, LOC666499, EG625870
Downstream geneLOC100041425, LOC546866, Cbfa2t2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163M23.bB6Ng01-163M23.g
ACCDH956302DH956303
length6701,154
definitionDH956302|Mus musculus domesticus DNA, BAC clone: B6Ng01-163M23, 5' end.DH956303|Mus musculus domesticus DNA, BAC clone: B6Ng01-163M23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtcctgatgcagaactaatgaatggttgtaatgctgactataa
attcatcctctggtgaccactcataccaggagattcgtgttatacatatt
attgtaattagtaatgtttttcttttaacataacatggaaggcaatggtt
agaaacccagggcttaatgacaacctaaaagactgtgagcctgagtgagg
taacacattcacaaaggaactcacacaatatgtactcactgataagtgga
tattagcccaacacctaggatacccaagatataagatacaatttcctaaa
cacatgaaactcaagaaaaatgaagactgaagtgtggacactatgcccct
ccttagaagtgggaacaaaacacccttgaaaggagttacagagacaaagt
ttggagctgagatgaaaggatggaccatgtagagactgccatatccaggg
atccaccccataatcagcatccaaacgctgacaccattgcatacactagc
aagattttatcgaaaggacccagatgtagctgtctcttgtgagactatgc
cggggcctagcaaacacagaagtggatgctcacagtcagctaatggatgg
atcacagggctcccaatggaggagctagagaaagtacccaaggagctaaa
gggatctgcaaccctatagg
gaattctcacctgaggaatactgaatggcagagaagcagctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgatat
tccacttcactccagtcagaatggctaagatcaaaaactcaggttacagc
agatgctggtgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccacaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagatgaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctatttaaaaaaatgaatttatgaaattcctaggcaa
atggatgtacctggagggtatcatcctgagtgaagtaacccaatcacaaa
ggaactcgcacaatatgtactaactgataagtggatattagcccagaaac
ttaggataccctagatataagatacaacttgccaaacacatgaaattcaa
gaagaactaagaccaaagttggacactttaccctttcttagaaatgggaa
caaaacacctatagaaggagttacagagacaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatgcagggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggacccatatatagctctctcttgtgagactatgccagggcctagcaaac
acagaagtggatgatcacagtggatgggtcacacggcccccatgagagct
agagaaattacccaagagctaaagggaactgcaccctatagatgacacat
atgactacagtaccgggagctctttgtcttcagctgcatatgtatccaaa
gaatggctagtcagccatcactgcaagagagtccattgacttgccaattt
aatggccagtcagggaaaccaaggccaatggggaatggttgttaggtggc
tttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_59656532_59657201
seq2: B6Ng01-163M23.b_44_713

seq1  GAATTCAGTCCTGATGCAGAACTAATGAATGGTTGTAATGCTGACTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCTGATGCAGAACTAATGAATGGTTGTAATGCTGACTATAA  50

seq1  ATTCATCCTCTGGTGACCACTCATACCAGGAGATTCGTGTTATACATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCCTCTGGTGACCACTCATACCAGGAGATTCGTGTTATACATATT  100

seq1  ATTGTAATTAGTAATGTTTTTCTTTTAACATAACATGGAAGGCAATGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAATTAGTAATGTTTTTCTTTTAACATAACATGGAAGGCAATGGTT  150

seq1  AGAAACCCAGGGCTTAATGACAACCTAAAAGACTGTGAGCCTGAGTGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCAGGGCTTAATGACAACCTAAAAGACTGTGAGCCTGAGTGAGG  200

seq1  TAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGA  250

seq1  TATTAGCCCAACACCTAGGATACCCAAGATATAAGATACAATTTCCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCCCAACACCTAGGATACCCAAGATATAAGATACAATTTCCTAAA  300

seq1  CACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCCT  350

seq1  CCTTAGAAGTGGGAACAAAACACCCTTGAAAGGAGTTACAGAGACAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAAGTGGGAACAAAACACCCTTGAAAGGAGTTACAGAGACAAAGT  400

seq1  TTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATATCCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCATATCCAGGG  450

seq1  ATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCATACACTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCATACACTAGC  500

seq1  AAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGC  550

seq1  CGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGATGG  600

seq1  ATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAA  650

seq1  GGGATCTGCAACCCTATAGG  670
      ||||||||||||||||||||
seq2  GGGATCTGCAACCCTATAGG  670