BAC Information

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BAC

Clone NameB6Ng01-163O18
Chromosome7 (Build37)5 (Build37)
Map Location 110,833,122 - 110,833,70693,837,841 - 93,838,143
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneTrim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1
Downstream geneOlfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163O18.bB6Ng01-163O18.g
ACCDH956386DH956387
length954246
definitionDH956386|Mus musculus domesticus DNA, BAC clone: B6Ng01-163O18, 5' end.DH956387|Mus musculus domesticus DNA, BAC clone: B6Ng01-163O18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(110,833,122 - 110,833,706)(93,837,841 - 93,838,143)
sequence
gaattctcatagagcaatacatgcaattagtggtaaatgtacaatattta
tcagagaaaaagtttgattgaatttcagagaacatttaaagattttccaa
ctggtaataaggacacatgctctactatgttcatagcagccttatttata
atatccagaagctggaaagaacccagatgtaccccaacagaggaatggat
acagaaaatgtgatacatttacacaacggagtactactcagctattaaaa
acaatgaatttatgaaattcttgggcagatggatatatctggaggatatc
attctgagtgaggtaacccaatcacaaaagaagtcactggatatgtactc
actgataagtggatattagcccagaaacttagaatacccaagataaaatt
tgcaaaacacaagaaaaatcaagagaagaaagaccaacatgtgaatactt
cattcctccttagaataggaaaaaaaaatacccatggaaggagttacaga
gacaaagtttggaggtaagatgaaaggatggaccatccagagactaccct
acctgggaatccatcccatagtcagccacaaaacacagacattattgaac
atgccagcaagattttgctgaaaggaccctgatatagctgtcttgtgaga
ggctatgcaagtgcctggcaaataacagaattggatgctcataatcatct
attggatggaacacagggccctcaatggaggaactagagaaagtacacaa
gtagctaaagggatttgcaaccctatagttggaacaacaatatgaactaa
ctagtacccccagagctcatttctctagctgcatatgtggcggaagatgg
cctagtcagccttcattgggaaagaaggccaaacttgcaaactttatatg
ccccagtacaggggaacgccagagccaaaagtgggagtgggtgggtaggg
gagc
gaattctcacctgaggaatagcagagaagcacctgaaaaaatgttcaaca
tccttatttttttattacgtattttcctcaattacatttccaatgctatc
ccaaaatcccccaaaccctccccccccacactcccctacccacccattcc
cattttttggccctggtgttcccctgtactggggcatataaagtttgcct
gtccaatgggcccccctttccattgatagcccactaacatcttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110833122_110833706
seq2: B6Ng01-163O18.b_45_629

seq1  GAATTCTCATAGAGCAATACATGCAATTAGTGGTAAATGTACAATATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATAGAGCAATACATGCAATTAGTGGTAAATGTACAATATTTA  50

seq1  TCAGAGAAAAAGTTTGATTGAATTTCAGAGAACATTTAAAGATTTTCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAAAAGTTTGATTGAATTTCAGAGAACATTTAAAGATTTTCCAA  100

seq1  CTGGTAATAAGGACACATGCTCTACTATGTTCATAGCAGCCTTATTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATAAGGACACATGCTCTACTATGTTCATAGCAGCCTTATTTATA  150

seq1  ATATCCAGAAGCTGGAAAGAACCCAGATGTACCCCAACAGAGGAATGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAGAAGCTGGAAAGAACCCAGATGTACCCCAACAGAGGAATGGAT  200

seq1  ACAGAAAATGTGATACATTTACACAACGGAGTACTACTCAGCTATTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAATGTGATACATTTACACAACGGAGTACTACTCAGCTATTAAAA  250

seq1  ACAATGAATTTATGAAATTCTTGGGCAGATGGATATATCTGGAGGATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAATTTATGAAATTCTTGGGCAGATGGATATATCTGGAGGATATC  300

seq1  ATTCTGAGTGAGGTAACCCAATCACAAAAGAAGTCACTGGATATGTACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAGTGAGGTAACCCAATCACAAAAGAAGTCACTGGATATGTACTC  350

seq1  ACTGATAAGTGGATATTAGCCCAGAAACTTAGAATACCCAAGATAAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAAGTGGATATTAGCCCAGAAACTTAGAATACCCAAGATAAAATT  400

seq1  TGCAAAACACAAGAAAAATCAAGAGAAGAAAGACCAACATGTGAATACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAACACAAGAAAAATCAAGAGAAGAAAGACCAACATGTGAATACTT  450

seq1  CATTCCTCCTTAGAATAGGAAAAAAAAATACCCATGGAAGGAGTTACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTCCTTAGAATAGGAAAAAAAAATACCCATGGAAGGAGTTACAGA  500

seq1  GACAAAGTTTGGAGGTAAGATGAAAGGATGGACCATCCAGAGACTACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGTTTGGAGGTAAGATGAAAGGATGGACCATCCAGAGACTACCCT  550

seq1  ACCTGGGAATCCATCCCATAGTCAGCCACAAAACA  585
      |||||||||||||||||||||||||||||||||||
seq2  ACCTGGGAATCCATCCCATAGTCAGCCACAAAACA  585

seq1: chr5_93837841_93838143
seq2: B6Ng01-163O18.g_126_315 (reverse)

seq1  CAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTT  50
      |||||||||   |||| ||| |||| ||||||| | ||||||||||||  
seq2  CAAAAGATG--TTAGTGGGCTATCAATGGAAAGGGGGGCCCATTGGACAG  48

seq1  GCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGG  100
      ||||||||||||||||||||||||||||||| |||||||||||||  |||
seq2  GCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAAAAATGGG  98

seq1  AGTGGGTGGGTAGGGGAGTGGGGGGTGGGTGGGTATGGGGGGATTTTGGT  150
      | |||||||||||||||||| |||| ||| |||| | |||||||||||| 
seq2  AATGGGTGGGTAGGGGAGTGTGGGGGGGGAGGGT-TTGGGGGATTTTGGG  147

seq1  ATAGCATTGGAAATGTAAATGAGCTAAATGCCTAATAAATAGTGGAACAA  200
      |||||||||||||||||| ||||  |||| | ||||||| |         
seq2  ATAGCATTGGAAATGTAATTGAGGAAAATACGTAATAAAAAAA-------  190

seq1  ACAAACAAACAAAAACAAACAAACAAACAAACAAAAAGACTGGGGATGAG  250
                                                        
seq2  --------------------------------------------------  190

seq1  CTGCAGAAAAAAAAAGGAAATGTAATTGAGGAAAATATGAAATAATAAAA  300
                                                        
seq2  --------------------------------------------------  190

seq1  AAA  303
         
seq2  ---  190