BAC Information

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BAC

Clone NameB6Ng01-165L18
Chromosome5 (Build37)
Map Location 128,981,716 - 129,154,947
singlet/doubletdoublet
Overlap geneFzd10
Upstream geneTmem132c, Slc15a4, Glt1d1, Tmem132d
Downstream geneLOC100040398, Piwil1, Rimbp2, Stx2, Ran, LOC100040441, Gpr133, LOC100039355, Sfrs8, Mmp17, EG620248
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165L18.bB6Ng01-165L18.g
ACCDH957713DH957714
length1,121619
definitionDH957713|Mus musculus domesticus DNA, BAC clone: B6Ng01-165L18, 5' end.DH957714|Mus musculus domesticus DNA, BAC clone: B6Ng01-165L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,153,818 - 129,154,947)(128,981,716 - 128,982,332)
sequence
gaattctttcagccagctcttatggtctagtcttgtctttaagaacatgt
tctaactaggtctaaaccggtgtgtgccagtgttcgaatattatctttta
acgtcccatcagaaaaacatgcagactctttcacatggccccatcccatc
actgggaaaattcacccacctatcagaatgtgtgtgaggaagctcttatc
ttgccagattttccctggaagagagcatggaagaagggcttgacaaaaaa
aaaaaaatgcctggccctgagctcttccgtccttacatgccaatggcggt
agaagacctccaatttgaccctttctgggctgtgccgttgactttgatta
ttgtgaagcccagagggaaatgtacagggaagacttagtgtgtctttcaa
gactctagaacactgaccaaagcctgacagacatggcttctgtcaccacc
atcaccagagctccagtgaggagctgcagaattacagttcttgacaaaac
ctttaagacaaagagacacagttcatttgctctcacagataagaatcagg
gccaaggggctggagagatggctcagaggttaagagcactgtctgctctt
ctagaggtcttgagttcaattcccagctccaaaccatctgtaatatctga
tgccattttctgacatgcacgtatatatacagatagagcactcatttaca
taaaataaataagtaaatcttaaaacaacaacaaaaaaataagagccgaa
gagatgatccactctggcctccaattttgtgcacagttgaggctggcctt
gaactcccgaccctcccgaccctcccgcctccacctctagagtgtttgag
gatacagcatgggccaccatgcccagcttgcaagcttgtctttgaccttt
tcttagagataagattataacgagcaagcccattttgatgttgtcccact
tacagttactgtatggttctcagatgccttccaaagccacaaattggttt
aaaacacaccccaaccttgtgctcagaggtacccgggctcagctcatctt
tttttaccccttcagaagatccattttgttattcatgaatccaaacagct
tctgcctgtcctcgattgaca
gaattccaacatcttgggaacgtaaccttgtgtgcatttttctagaaacg
gagagaaggagacatttgtagtctcgcaggttctttgctctttcaaagtt
cacagaggtatgctgagtaagctagagttttcccaaaccgtttgagcatc
cacaagacaacagggaacgctctggattcaaaacgctccaaaccgaactc
ctcaagaagatatggtggtgaagccagacatgagctctctccacagtgta
catggctggagagcccattttattctgttctctaaaatagtagtgagaca
agaatacaacgcgttctctgaaaaaggcccttattttctcttcatgatga
cctgatagaaacaacccaagggaggaagtgttatcttgacgtccacttct
tgtgatcttagtcaacagttctcagcttgactgtattgatgctgggccag
tggtgacacagaactccacagcggcaggtggtacaggagactagtgatgt
catgatgggcaggaagcagagagagagagagagagagagagagagagaga
gagagagagagagagaggaggactttccaatccagtacattcttcaaaaa
gcaactactgagtaattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_129153818_129154947
seq2: B6Ng01-165L18.b_46_1166 (reverse)

seq1  TGTCAATACCGAGGCCAGGCAGAAGCTGTTTGGA-TCATGAATAACCAAA  49
      |||||||  ||||| ||||||||||||||||||| ||||||||||| |||
seq2  TGTCAAT--CGAGGACAGGCAGAAGCTGTTTGGATTCATGAATAACAAAA  48

seq1  TGGCTTCCTTCTGAAGGGGGTAAAAAAAGATGGAGCTGAGGCCCGGGTAC  99
      ||| |  |||||||| ||||||||||||||| ||||||| ||||||||||
seq2  TGGAT--CTTCTGAA-GGGGTAAAAAAAGAT-GAGCTGA-GCCCGGGTAC  93

seq1  CTCTGAGCACAGGTTTGGGGTGTGTTTTAAACCAATTTGTGGCTTTTGGA  149
      ||||||||||| | ||||||||||||||||||||||||||||| ||||||
seq2  CTCTGAGCACAAGGTTGGGGTGTGTTTTAAACCAATTTGTGGC-TTTGGA  142

seq1  AGGCATCCTGAGAACCATACAGTAACTGTAAGTGGGGACAACATCAAAAT  199
      |||||| |||||||||||||||||||||||||| ||||||||||||||||
seq2  AGGCAT-CTGAGAACCATACAGTAACTGTAAGT-GGGACAACATCAAAAT  190

seq1  GGGCTTGCTCGTTATAATCTTATCTCTAAGAAAAGGTCAAAGACAAGCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGCTCGTTATAATCTTATCTCTAAGAAAAGGTCAAAGACAAGCTT  240

seq1  GCAAGCTGGGCATGGTGGCCCATGCTGTATCCTCAAACACTCTAGAGGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTGGGCATGGTGGCCCATGCTGTATCCTCAAACACTCTAGAGGTG  290

seq1  GAGGCGGGAGGGTCGGGAGGGTCGGGAGTTCAAGGCCAGCCTCAACTGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGGGAGGGTCGGGAGGGTCGGGAGTTCAAGGCCAGCCTCAACTGTG  340

seq1  CACAAAATTGGAGGCCAGAGTGGATCATCTCTTCGGCTCTTATTTTTTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATTGGAGGCCAGAGTGGATCATCTCTTCGGCTCTTATTTTTTTG  390

seq1  TTGTTGTTTTAAGATTTACTTATTTATTTTATGTAAATGAGTGCTCTATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTTAAGATTTACTTATTTATTTTATGTAAATGAGTGCTCTATC  440

seq1  TGTATATATACGTGCATGTCAGAAAATGGCATCAGATATTACAGATGGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATATACGTGCATGTCAGAAAATGGCATCAGATATTACAGATGGTT  490

seq1  TGGAGCTGGGAATTGAACTCAAGACCTCTAGAAGAGCAGACAGTGCTCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTGGGAATTGAACTCAAGACCTCTAGAAGAGCAGACAGTGCTCTT  540

seq1  AACCTCTGAGCCATCTCTCCAGCCCCTTGGCCCTGATTCTTATCTGTGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGAGCCATCTCTCCAGCCCCTTGGCCCTGATTCTTATCTGTGAG  590

seq1  AGCAAATGAACTGTGTCTCTTTGTCTTAAAGGTTTTGTCAAGAACTGTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGAACTGTGTCTCTTTGTCTTAAAGGTTTTGTCAAGAACTGTAA  640

seq1  TTCTGCAGCTCCTCACTGGAGCTCTGGTGATGGTGGTGACAGAAGCCATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAGCTCCTCACTGGAGCTCTGGTGATGGTGGTGACAGAAGCCATG  690

seq1  TCTGTCAGGCTTTGGTCAGTGTTCTAGAGTCTTGAAAGACACACTAAGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAGGCTTTGGTCAGTGTTCTAGAGTCTTGAAAGACACACTAAGTC  740

seq1  TTCCCTGTACATTTCCCTCTGGGCTTCACAATAATCAAAGTCAACGGCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGTACATTTCCCTCTGGGCTTCACAATAATCAAAGTCAACGGCAC  790

seq1  AGCCCAGAAAGGGTCAAATTGGAGGTCTTCTACCGCCATTGGCATGTAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGAAAGGGTCAAATTGGAGGTCTTCTACCGCCATTGGCATGTAAG  840

seq1  GACGGAAGAGCTCAGGGCCAGGCATTTTTTTTTTTTTGTCAAGCCCTTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGAAGAGCTCAGGGCCAGGCATTTTTTTTTTTTTGTCAAGCCCTTCT  890

seq1  TCCATGCTCTCTTCCAGGGAAAATCTGGCAAGATAAGAGCTTCCTCACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCTCTCTTCCAGGGAAAATCTGGCAAGATAAGAGCTTCCTCACAC  940

seq1  ACATTCTGATAGGTGGGTGAATTTTCCCAGTGATGGGATGGGGCCATGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTGATAGGTGGGTGAATTTTCCCAGTGATGGGATGGGGCCATGTG  990

seq1  AAAGAGTCTGCATGTTTTTCTGATGGGACGTTAAAAGATAATATTCGAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTCTGCATGTTTTTCTGATGGGACGTTAAAAGATAATATTCGAAC  1040

seq1  ACTGGCACACACCGGTTTAGACCTAGTTAGAACATGTTCTTAAAGACAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCACACACCGGTTTAGACCTAGTTAGAACATGTTCTTAAAGACAAG  1090

seq1  ACTAGACCATAAGAGCTGGCTGAAAGAATTC  1130
      |||||||||||||||||||||||||||||||
seq2  ACTAGACCATAAGAGCTGGCTGAAAGAATTC  1121

seq1: chr5_128981716_128982332
seq2: B6Ng01-165L18.g_69_687

seq1  GAATTCCAACATCTTGGGAACGTAACCTTGTGTGCATTTTTCTAGAAACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACATCTTGGGAACGTAACCTTGTGTGCATTTTTCTAGAAACG  50

seq1  GAGAGAAGGAGACATTTGTAGTCTCGCAGGTTCTTTGCTCTTTCAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAGGAGACATTTGTAGTCTCGCAGGTTCTTTGCTCTTTCAAAGTT  100

seq1  CACAGAGGTATGCTGAGTAAGCTAGAGTTTTCCCAAACCGTTTGAGCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGTATGCTGAGTAAGCTAGAGTTTTCCCAAACCGTTTGAGCATC  150

seq1  CACAAGACAACAGGGAACGCTCTGGATTCAAAACGCTCCAAACCGAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGACAACAGGGAACGCTCTGGATTCAAAACGCTCCAAACCGAACTC  200

seq1  CTCAAGAAGATATGGTGGTGAAGCCAGACATGAGCTCTCTCCACAGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAGATATGGTGGTGAAGCCAGACATGAGCTCTCTCCACAGTGTA  250

seq1  CATGGCTGGAGAGCCCATTTTATTCTGTTCTCTAAAATAGTAGTGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGGAGAGCCCATTTTATTCTGTTCTCTAAAATAGTAGTGAGACA  300

seq1  AGAATACAACGCGTTCTCTGAAAAAGGCCCTTATTTTCTCTTCATGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACAACGCGTTCTCTGAAAAAGGCCCTTATTTTCTCTTCATGATGA  350

seq1  CCTGATAGAAACAACCCAAGGGAGGAAGTGTTATCTTGACGTCCACTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAGAAACAACCCAAGGGAGGAAGTGTTATCTTGACGTCCACTTCT  400

seq1  TGTGATCTTAGTCAACAGTTCTCAGCTTGACTGTATTGATGCTGGGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCTTAGTCAACAGTTCTCAGCTTGACTGTATTGATGCTGGGCCAG  450

seq1  TGGTGACACAGAACTCCACAGCGGCAGGTGGTACAGGAGACTAGTGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACACAGAACTCCACAGCGGCAGGTGGTACAGGAGACTAGTGATGT  500

seq1  CATGATGGGCAGGAAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGGGCAGGAAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  550

seq1  GAGAGAGAGAGAGAGAGGAGGAC-TTCCAATCCAGTACAATCTTC-AAAA  598
      ||||||||||||||||||||||| ||||||||||||||| ||||| ||||
seq2  GAGAGAGAGAGAGAGAGGAGGACTTTCCAATCCAGTACATTCTTCAAAAA  600

seq1  GCAACTACTGAGTAATCTA  617
      |||||||||||||||| ||
seq2  GCAACTACTGAGTAATTTA  619