BAC Information

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BAC

Clone NameB6Ng01-165P17
Chromosome5 (Build37)
Map Location 79,399,421 - 79,400,029
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039398, Mthfr-ps1, EG384187
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165P17.bB6Ng01-165P17.g
ACCDH957889DH957890
length6091,172
definitionDH957889|Mus musculus domesticus DNA, BAC clone: B6Ng01-165P17, 5' end.DH957890|Mus musculus domesticus DNA, BAC clone: B6Ng01-165P17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttttttcagaaaccacttagctatccatttcctatagaacac
gaaagtgtttcctgtgacaaattgtcactttgttagaattcccttaaaaa
gatttgggatataaagtcacaaaaacatcgtaagtggtcttcaagatgag
gtaaggtaaatggaagaaatattcatgaaggaagcttcctggtatgacac
ggcaatgcaatggattaaatacaaaatttatcatagacacattatatacc
acagtacacactgtgttgaacaacaaactttggcaaaattatctataaag
cattacagctaatagagtggctgtatagcacagaaaatacctggtcttga
tctaaggtccctcatagacttctggttacacccatccacagtgtttttac
tttttaatatgtatattgactaaacataattaaaattttgtgctcaagaa
atatggacatacataaatgagttctcccactgtaagatgtcaaaaagtaa
gcaaatgtaagaaaatcattaagaaattgtatgttttccttgtgcgtgca
tgtgtgtttgtgtgtgcgcgcgcgcgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgt
gaattcttttttttttttctattttattttgttttattatttttccttta
ttgaaacatgtttataagacaataatctgattgtgttttttgcctcctcc
aacttcatggagagtttctttctgcacttcccctcccatatgattccaca
cactctctgtctctcctaagaaaacaaacaggcatctaaataacaaaata
agacaaaaaacaaaaccaaaaacaaatgggaaaagggaaaaataacaaat
gaaagacaaagagccaaaagaaaaaaaaaatcaccagaaactcatataga
tacacagatacccacaaatgaatcctctaaaatcacagaacttgaagtca
taatacatatgcataggatccataaggtaaaaaatgatttaaaaaatagt
aaaaattgccttgacaaaacattatgagacacagaacccccaaagacacc
attgagtctgttttgtgttgatcatctacagttaagcctggggcctggcc
ttgagagtagattgtatccccagtgagactctactggagagaactaattt
tttctttgttggtggctagcaatcggatttttgtgtatcctctttaaagt
cttctacctgtttacctgtgttctctttaggggtttatttatgtccttat
taaagtccaccatcagcatcatgagatgtgatttttaaatccaattctta
attttccagtgtgttggggtatcctggacttgctgtgtttgttgaactgg
gttctgatgatgcctagtagccttggtttctgttggtatggtttctgtgt
ttgccttccccatctgtttatctctggtgttaattggtcttgctgtctct
ggctggagcttgtccctcctgagggcctataaacctgtgtcttcactctt
gggaagacaagatttctctggacagaattttggtatggagggctgtagaa
acattttttatttctggatgcagatagagattgggaaggatcttgtccag
ctgctctactgtttcttgtgcctaatagctctgcttgttacagctttgga
cagttatttggagagtgtcatctctccttctgagaattgggagcaggagt
gagaacagtttggaagaaccagtctctctgccgaaagtttcgagacccat
cttagcatatattgatatgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_79399421_79400029
seq2: B6Ng01-165P17.b_49_657

seq1  GAATTCATTTTTTTCAGAAACCACTTAGCTATCCATTTCCTATAGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTTTTCAGAAACCACTTAGCTATCCATTTCCTATAGAACAC  50

seq1  GAAAGTGTTTCCTGTGACAAATTGTCACTTTGTTAGAATTCCCTTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTTTCCTGTGACAAATTGTCACTTTGTTAGAATTCCCTTAAAAA  100

seq1  GATTTGGGATATAAAGTCACAAAAACATCGTAAGTGGTCTTCAAGATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGGATATAAAGTCACAAAAACATCGTAAGTGGTCTTCAAGATGAG  150

seq1  GTAAGGTAAATGGAAGAAATATTCATGAAGGAAGCTTCCTGGTATGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTAAATGGAAGAAATATTCATGAAGGAAGCTTCCTGGTATGACAC  200

seq1  GGCAATGCAATGGATTAAATACAAAATTTATCATAGACACATTATATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGCAATGGATTAAATACAAAATTTATCATAGACACATTATATACC  250

seq1  ACAGTACACACTGTGTTGAACAACAAACTTTGGCAAAATTATCTATAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACACACTGTGTTGAACAACAAACTTTGGCAAAATTATCTATAAAG  300

seq1  CATTACAGCTAATAGAGTGGCTGTATAGCACAGAAAATACCTGGTCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGCTAATAGAGTGGCTGTATAGCACAGAAAATACCTGGTCTTGA  350

seq1  TCTAAGGTCCCTCATAGACTTCTGGTTACACCCATCCACAGTGTTTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGTCCCTCATAGACTTCTGGTTACACCCATCCACAGTGTTTTTAC  400

seq1  TTTTTAATATGTATATTGACTAAACATAATTAAAATTTTGTGCTCAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATATGTATATTGACTAAACATAATTAAAATTTTGTGCTCAAGAA  450

seq1  ATATGGACATACATAAATGAGTTCTCCCACTGTAAGATGTCAAAAAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGACATACATAAATGAGTTCTCCCACTGTAAGATGTCAAAAAGTAA  500

seq1  GCAAATGTAAGAAAATCATTAAGAAATTGTATGTTTTCCTTGTGCGTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTAAGAAAATCATTAAGAAATTGTATGTTTTCCTTGTGCGTGCA  550

seq1  TGTGTGTTTGTGTGTGCGCGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTGTGTGTGCGCGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTG  600

seq1  TGTGTGTGT  609
      |||||||||
seq2  TGTGTGTGT  609