BAC Information

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BAC

Clone NameB6Ng01-166E14
Chromosome5 (Build37)
Map Location 85,420,386 - 85,420,905
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha5, LOC100039489
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166E14.bB6Ng01-166E14.g
ACCDH958107DH958108
length514416
definitionDH958107|Mus musculus domesticus DNA, BAC clone: B6Ng01-166E14, 5' end.DH958108|Mus musculus domesticus DNA, BAC clone: B6Ng01-166E14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aataacattgagattctctgttcctgtatatttcacagtaaaatttgtct
ttggaagttgatgtaattggattatttccctgaaaagttcaatgatagaa
agggtatgataagccacacaataatcagtattaggccaccaaatttcatc
atcagagaaagctactggaaatgaagtcactgacagaagagttagcttca
taatatttactggaactttcccattttgtgtctcttttggtgtactatat
atagacagcttcatgacttacatcacaggaaagcaaatgctatacttcaa
tgagaaagaattgcccaaataaatgcagtatcttctaaaagcaccatagt
taaaaagttaattaaatctaattatttcttattgttttagatggtcagcc
atcattggaaaaagaggcccattggtctttcaaactttatatgcctcagt
acaggggaatgccagggccaagaagtgggagtgagtgggtagcggagtgt
ggtggggagggcat

cagaggtccaaaatgctaagccttcctgcagattgaagaactggcagctg
ccctgtggcttttaagtggctgctgtgttaccaggttttctttttgtttc
aaggagaagttagataaagagtctttgccaaaacctgttgtgggggtaag
gaaatatgaagctaggctgggcttcgtctatgagttttgaagatatttca
cttttgagaaggggaaggagaagatacccctctttggttggatggggaga
agtgaagtaaggggagtagcaggtggtttctcatttgattttttaatgga
tccttgctcttgagttggagagggaggagtaggaggagcagagggtttat
ttactgtttcctccaaggcattagggggcaggagtggatagatgggtttt
atttcctgtattagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_85420386_85420905
seq2: B6Ng01-166E14.b_47_566 (reverse)

seq1  ATGCCCTCCCCACCACACTCCGCTACCCACTCACTCCCACTTCTTGGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTCCCCACCACACTCCGCTACCCACTCACTCCCACTTCTTGGCCC  50

seq1  TGGCATTCCCCTGTACTGAGGCATATAAAGTTTGAAAGACCAATGGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTCCCCTGTACTGAGGCATATAAAGTTTGAAAGACCAATGGGCCT  100

seq1  CTTTTTCCAATGATGGCTGACCATCTAAAACAATAAGAAATAATTAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCAATGATGGCTGACCATCTAAAACAATAAGAAATAATTAGATT  150

seq1  TAATTAACTTTTTAACTATGGTGCTTTTAGAAGATACTGCATTTATTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACTTTTTAACTATGGTGCTTTTAGAAGATACTGCATTTATTTGG  200

seq1  GCAATTCTTTCTCATTGAAGTATAGCATTTGCTTTCCTGTGATGTAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTCTTTCTCATTGAAGTATAGCATTTGCTTTCCTGTGATGTAAGTC  250

seq1  ATGAAGCTGTCTATATATAGTACACCAAAAGAGACACAAAATGGGAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCTGTCTATATATAGTACACCAAAAGAGACACAAAATGGGAAAGT  300

seq1  TCCAGTAAATATTATGAAGCTAACTCTTCTGTCAGTGACTTCATTTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAAATATTATGAAGCTAACTCTTCTGTCAGTGACTTCATTTCCAG  350

seq1  TAGCTTTCTCTGATGATGAAATTTGGTGGCCTAATACTGATTATTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTCTCTGATGATGAAATTTGGTGGCCTAATACTGATTATTGTGTG  400

seq1  GCTTATCATACCCTTTCTATCATTGAACTTTTCAGGGAAATAATCCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATCATACCCTTTCTATCATTGAACTTTTCAGGGAAATAATCCAATT  450

seq1  ACATCAACTTCCAAAGACAAATTTTACTGTGAAATATACAGGAACAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAACTTCCAAAGACAAATTTTACTGTGAAATATACAGGAACAGAGA  500

seq1  ATCTCAATGTTATTGAATTC  520
      ||||||||||||||||||||
seq2  ATCTCAATGTTATTGAATTC  520


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