BAC Information

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BAC

Clone NameB6Ng01-168B09
Chromosome5 (Build37)
Map Location 60,983,821 - 60,984,527
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546866, Cbfa2t2-ps1
Downstream geneLOC100041498, LOC666597, EG666610
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168B09.bB6Ng01-168B09.g
ACCDH959417DH959418
length1,250867
definitionDH959417|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B09, 5' end.DH959418|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcaaaggccagc
ttactgcttggcctcttggcagtcggcttcaaggtcatagtgcacctcca
ccctatgctgagcccccgccctgcgtagtgcatcagccctgcgcagagag
gcaatggacagagaggcaatgcacagactcgttcattccaaaggaggaac
aaaggaaaatacaacaggcatttccggtctttgaaggagccgagggtggg
cgtgtccacgctccggtagcgtatatacagattaaagagcttgccgagtc
ggtccgtaactatggagtcagtgctaatttcactatagcacaagtggaaa
ggcttgcgaatcacgctatgactcctggtgattggcagacggtagtaaaa
gctgtagcccccagtatgggaatgtatcttgagtggaaagccttgtggca
ggactcctgccagacgcaggcaagggccaatgccaccatgaaaggggatc
agagaacgtggacttttgaattacttacaggtcagggacaacacgctgct
aaccagacaaattatcattggggagcatatgctcagatctcagctgctgc
tgttaaggcatggaaagcactacctaagaagggagaggcaagtgggcagt
tgaccaagattactcaaggtgcacaggaatccttctcagattttgtggcc
agaatgacagaggcagcagagcgtatttttggagagtcagagcaagctgc
gcctctgataaaacagctaatctatgagcaagccacaaaggagtgccgag
cggccatagccccaagaaagaacaaaggcttacaagactggctcagggtc
tgtcgagagcttgggggacctctcagcaatgcaggtttagcggctgccat
ccttcaatcccaaaatgctccatgggcagaaatgatcggaggacatgttt
aactgcagagcctggcatcttagaagattgcagagctcaggtaaacagga
gggactctcacctctttgctctagtgtggcaggtatcatagagctgacag
tgtcgctttgtggggatataagcagatcttcccccactgatagtcaatca
gctatgtgcaaaacggtcatcggccctgttcaaggcctcagaattgcacc
gtgtcaggaccggaggaccgatctaaagagcgcgcactctgctgagtaga

gaattcacctgcccagagtagttggctagacttcaaatatcaggcaggat
ttccactatgttgagagggtcttatgtccaatgagggagcttgaagttat
acatgctactgtttaccagataggcacatgtgccatgatgggttcaaagg
tgccatagcctggaaggactttacttcagaatgttgaatggtggctagtt
ctcaaagtgaaagatttcagattgattatagcttaagggcctctgggccc
tgtgtctgatgttcatgctgtcctctacaaagaggacttaacttgagact
cttaaggggtcaatcaagggtaaccgcaagagcttggaacattttgggaa
tctcaaagataatcctgactgacaacacaagagaagactgtccaagtctg
atattggactttttgctaaatactctttggatcatggacacagcatttgc
atcccaaattagatgtaatataagctatacatgcatatttatatactgaa
ttaaagttattgtaggtatttctaggttttttaattagtaggatgactct
atgactttattcaaacatgcttattgttatggttctctctttcctctcat
ttaggaccatctctccacagttttttctactttcccatcagatcacttgt
acctgatataaaattttcaagtaaatagatagaagttgaaaagacagtat
tttttttattagatatatatatattttctttttattgggtattttcttta
gggaataaactgccaaccaaagagcacacatggtgggactcatggctcca
gttgcatatgtagcagaggatggcctagatggtcatcaatgcaggggtgg
tggtggaggagggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_60983821_60984527
seq2: B6Ng01-168B09.g_230_936

seq1  TGGAAGGACTTTACTTCAGAATGTTGAATGGTGGCTAGTTCTCAAAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGACTTTACTTCAGAATGTTGAATGGTGGCTAGTTCTCAAAGTGA  50

seq1  AAGATTTCAGATTGATTATAGCTTAAGGGCCTCTGGGCCCTGTGTCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTCAGATTGATTATAGCTTAAGGGCCTCTGGGCCCTGTGTCTGAT  100

seq1  GTTCATGCTGTCCTCTACAAAGAGGACTTAACTTGAGACTCTTAAGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGCTGTCCTCTACAAAGAGGACTTAACTTGAGACTCTTAAGGGGT  150

seq1  CAATCAAGGGTAACCGCAAGAGCTTGGAACATTTTGGGAATCTCAAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAGGGTAACCGCAAGAGCTTGGAACATTTTGGGAATCTCAAAGAT  200

seq1  AATCCTGACTGACAACACAAGAGAAGACTGTCCAAGTCTGATATTGGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGACTGACAACACAAGAGAAGACTGTCCAAGTCTGATATTGGACT  250

seq1  TTTTGCTAAATACTCTTTGGATCATGGACACAGCATTTGCATCCCAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTAAATACTCTTTGGATCATGGACACAGCATTTGCATCCCAAATT  300

seq1  AGATGTAATATAAGCTATACATGCATATTTATATACTGAATTAAAGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAATATAAGCTATACATGCATATTTATATACTGAATTAAAGTTAT  350

seq1  TGTAGGTATTTCTAGGTTTTTTAATTAGTAGGATGACTCTATGACTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTATTTCTAGGTTTTTTAATTAGTAGGATGACTCTATGACTTTAT  400

seq1  TCAAACATGCTTATTGTTATGGTTCTCTCTTTCCTCTCATTTAGGACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACATGCTTATTGTTATGGTTCTCTCTTTCCTCTCATTTAGGACCAT  450

seq1  CTCTCCACAGTTTTTTCTACTTTCCCATCAGATCACTTGTACCTGATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACAGTTTTTTCTACTTTCCCATCAGATCACTTGTACCTGATATA  500

seq1  AAATTTTCAAGTAAATAGATAGAAGTTGAAAAGACAGTATTTTTTTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCAAGTAAATAGATAGAAGTTGAAAAGACAGTATTTTTTTTATT  550

seq1  AGATATATATATATTTTCTTTTTATTGGGTATTTTCTTTAGGGAATAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATATATATATTTTCTTTTTATTGGGTATTTTCTTTAGGGAATAAAC  600

seq1  TGCCAACCAAAGAGCACACATGGTGGGACTCATGGCTCCAGTTGCATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACCAAAGAGCACACATGGTGGGACTCATGGCTCCAGTTGCATATG  650

seq1  TAGCAGAGGATGGCCTAGATGGTCATCAATGCAGGGGTGGTGGTGGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAGGATGGCCTAGATGGTCATCAATGCAGGGGTGGTGGTGGAGGA  700

seq1  GGGAGGA  707
      |||||||
seq2  GGGAGGA  707