BAC Information

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BAC

Clone NameB6Ng01-168O08
Chromosome5 (Build37)
Map Location 60,766,058 - 60,767,033
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546866, Cbfa2t2-ps1
Downstream geneLOC100041498, LOC666597, EG666610
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168O08.bB6Ng01-168O08.g
ACCDH960015DH960016
length1,249980
definitionDH960015|Mus musculus domesticus DNA, BAC clone: B6Ng01-168O08, 5' end.DH960016|Mus musculus domesticus DNA, BAC clone: B6Ng01-168O08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgagaaatcgcaaattgctgagaagcacctaaagtaatg
ttcaaaatccttagacatcagggaaatgtaaatcaaaacaaccctgagat
tccaactcacaccagtcaaaatggctaagatcaaaaactcaggtgacagc
agatgctggtgaggatgtggagaaagaagaacactcctccattgctgatg
agattgcaagctggtacaaccactctggaaatcagtgtgtgtttcctcag
aaagttgggcatagtattaccagatgacccagctatatccttcctgggca
tatacccaaaagatgttccaacttttggacacatgctccactatgtttaa
agcagccttatgtccttcaacagaggaatagatacagaaaatgtagtata
tttatttaatggattattactcagcttttaaaaaattacttcatgaaatc
cttaggtaaatggatggactagaaaaaaaacatccttagtgaagtaacct
aatcataaaagaacacatatgctatacactcactggtaagagaatattca
cccaaaagctctgaaaacacaggatacaattcacagacatcctgacgctc
aagaagaaggaagacaaaagtctgggtgcttcggtccttgtttagaaggg
gtaacaaaattctcagagcagcaaatatggggacaaagtatggagtagag
accgattgaaaggctatcccgggacttcaccaactggagatccatcccat
ttacagcccccaaactcagacactattgtggatgccaagaagtgtttgct
gacaaaaacctgataaagttttctcctgaaaggctctgacagagcctgac
atatacagaggtggatgctcacagccaaccattgaactgatcatgagata
cccaatggacacgttagagaaaggacagaagtgctgaaggtttttcaacc
ccataggaagaacacaatatcaccaaccaggacttctcagtctaaaccac
caaccagagtacacatgagatctatgacttcagccatatatgtaacgaga
tggccttgtggaaattcatgaaagaaaaagcttggttccatgagatcgat
gccccaatatagggtatgtgaggacacaaaacagactagtggtggttgaa
gacaccttcatgagcagagatgttttaagatggcttcgaaatgattcgaa
gaattaacattgaatcagatatgaaaactccactgtgcgccttttttca
gaattcaaatttcacctgaattccaggagaatataatcctctttatatat
gtagtattttttaattaggtattttcttcatttacatttccagtgctatc
ccaaaagtcccccataccctccccccattcccctacccactcactcctac
ttcttggccctggcgttcccctgtacttagtcatataaagttagcacgac
caatgggcctctctttccactgatggttaactaggccatctcctgataca
taggcaatagtcctcttagtattatgctatcagtctcaaagtgtctattt
caagaattacatcttaaaacaggttgccttttaagcaatatttatgggac
ttcattactataataatataatgacctggaaatattgtaagaaaagcaag
aagaagagcttgtaaaaaaaaaaaaaacaaaaggaaattttatgatatgt
gcaattataggagtgaattaaaaatgtttgggatggataaaatatataat
aatgacatggaataataaaatgtgaaaattaaatgtatgtttcacaacta
tattttactttaaaatacatcacaggatgacgttgaaattgtttatatat
atatatatatatatatacatatacatatatacatatatatatatatatat
atatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatatatatgtatatat
atacatcaatttatatacctcagttatatattactaaaattgttaaattt
ttatttcaattatgaggaaaatgtatactaataatgtggtttttataaaa
gtgggacttagctctgttctaggaatgctgcctcaaagggatttctttta
tatcaatgaagttctaagtcctattatcctgagcatggcctttttgggaa
tttggaaatctctcaattcataatatattgtgcccgaagaatatctctta
aatcagtggctcttatttctttctgttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_60766058_60767033
seq2: B6Ng01-168O08.g_67_1046 (reverse)

seq1  CAGAACTGAAAAAAATAAAGAGCC-CTGA-TTAAGAGATATTCCTCAGGC  48
      |||||| |||| |||| ||||||| |||| ||||||||||||| || |||
seq2  CAGAACAGAAAGAAAT-AAGAGCCACTGATTTAAGAGATATTCTTCGGGC  49

seq1  ACAATATATTATGAATTGAAAAGATTCCAAAATCCCAAAACAGCCATGCT  98
      ||||||||||||||||||| |   ||||||| ||||||||  ||||||||
seq2  ACAATATATTATGAATTGAGAGATTTCCAAATTCCCAAAAAGGCCATGCT  99

seq1  CAAGATAATAGAACTTAGAACTATCATTGATAT-AAAGAAATCCCTTTGA  147
      || |||||||| |||||||||| |||||||||| ||||||||||||||||
seq2  CAGGATAATAGGACTTAGAACT-TCATTGATATAAAAGAAATCCCTTTGA  148

seq1  GGCAGCATTCCTAGTACTGAGCTAATTCCC-TTCTTATAAAAACCACATT  196
      |||||||||||||| || ||||||| ||||  | ||||||||||||||||
seq2  GGCAGCATTCCTAGAACAGAGCTAAGTCCCACTTTTATAAAAACCACATT  198

seq1  ATTAGTATACA-TTTCATCATAATTGAAAT-AAAATTTAACAATTATAGT  244
      ||||||||||| |||| ||||||||||||| |||||||||||||| ||||
seq2  ATTAGTATACATTTTCCTCATAATTGAAATAAAAATTTAACAATTTTAGT  248

seq1  AATATATAACTGAGGTATATAAATTGATGTATATATATACATATATATGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AATATATAACTGAGGTATATAAATTGATGTATATATATACATATATATGC  298

seq1  ACACACACACACACACACACACACACACATATATATATATATATATATAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACATATATATATATATATATATAT  348

seq1  GTATATATGTATATGTATATATATATATATATATATATAAACAATTTCAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATGTATATGTATATATATATATATATATATATAAACAATTTCAA  398

seq1  CGTCATCCTGTGATGTATTTTAAAGTAAAATATAGTTGTGAAACATACAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCATCCTGTGATGTATTTTAAAGTAAAATATAGTTGTGAAACATACAT  448

seq1  TTAATTTTCACATTTTATTATTCCATGTCATTATTATATATTTTATCCAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTCACATTTTATTATTCCATGTCATTATTATATATTTTATCCAT  498

seq1  CCCAAACATTTTTAATTCACTCCTATAATTGCACATATCATAAAATTTCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACATTTTTAATTCACTCCTATAATTGCACATATCATAAAATTTCC  548

seq1  TTTTGTTTTTTTTTTTTTTACAAGCTCTTCTTCTTGCTTTTCTTACAATA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTTTTTTTTACAAGCTCTTCTTCTTGCTTTTCTTACAATA  598

seq1  TTTCCAGGTCATTATATTATTATAGTAATGAAGTCCCATAAATATTGCTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGTCATTATATTATTATAGTAATGAAGTCCCATAAATATTGCTT  648

seq1  AAAAGGCAACCTGTTTTAAGATGTAATTCTTGAAATAGACACTTTGAGAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCAACCTGTTTTAAGATGTAATTCTTGAAATAGACACTTTGAGAC  698

seq1  TGATAGCATAATACTAAGAGGACTATTGCCTATGTATCAGGAGATGGCCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCATAATACTAAGAGGACTATTGCCTATGTATCAGGAGATGGCCT  748

seq1  AGTTAACCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCTAACTTTATAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACCATCAGTGGAAAGAGAGGCCCATTGGTCGTGCTAACTTTATAT  798

seq1  GACTAAGTACAGGGGAACGCCAGGGCCAAGAAGTAGGAGTGAGTGGGTAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGTACAGGGGAACGCCAGGGCCAAGAAGTAGGAGTGAGTGGGTAG  848

seq1  GGGAATGGGGGGAGGGTATGGGGGACTTTTGGGATAGCACTGGAAATGTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGGGGGGAGGGTATGGGGGACTTTTGGGATAGCACTGGAAATGTA  898

seq1  AATGAAGAAAATACCTAATTAAAAAATACTACATATATAAAGAGGATTAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGAAAATACCTAATTAAAAAATACTACATATATAAAGAGGATTAT  948

seq1  ATTCTCCTGGAATTCAGGTGAAATTTGAATTC  976
      ||||||||||||||||||||||||||||||||
seq2  ATTCTCCTGGAATTCAGGTGAAATTTGAATTC  980