BAC Information

Click to search

BAC

Clone NameB6Ng01-170I14
Chromosome5 (Build37)
Map Location 128,248,576 - 128,394,340
singlet/doubletdoublet
Overlap geneTmem132d
Upstream geneLOC100040327, Tmem132c, Slc15a4, Glt1d1
Downstream geneFzd10, LOC100040398, Piwil1, Rimbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170I14.bB6Ng01-170I14.g
ACCDH961225DH961226
length887232
definitionDH961225|Mus musculus domesticus DNA, BAC clone: B6Ng01-170I14, 5' end.DH961226|Mus musculus domesticus DNA, BAC clone: B6Ng01-170I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,248,576 - 128,249,461)(128,394,109 - 128,394,340)
sequence
gaattctagtattcccagagatttctggtatggtctctatgtgccaacag
cattatgctgcgatctatctatctttgcacaaatgtgtagctgccctggt
ggaataaaccacctactgtgcgttggagaagaaatcccttttgtttctct
gtgggccacttagctcattctctcagctgctatccaaagtctccacaaag
gagccgaactttgtttgcaaagatttcccaggaaacacagtcaccatctg
tggtggcagtgtcctgccctggtacccttggcttactgttcctgtacagc
tagcagtctccagtcttccccacagcatgctcctgagactggtccctact
ttatcctccacacaaagcaaagggcagggtaaaccagcagtgactacgtg
gtccagtaatgcaggactggacagcttaatgctgtgaggagaaccttgtc
accctttaccctgggaacactcttggtacacacacaggaaagacaagagt
taagacaggagctctggatcaaaaccacagggggaaaggttaacagagtc
ataaatgaaaggactgaggctggaatggccaaagaaagggcaaaggacag
attgaaattcgagaccactggagtatggaatcagagtctggaggccactg
ctcacccagctgcccattagaaccagacacgtaaagcttcaaaaatgcaa
attcctgcacttgcccttttgtctatggacttgaatgtttctggaggtaa
gccgtcccccctcttcttttccctttccttcccttccctcccctctctct
ttctttccttcacttcttttctacctccctctctcatacttttctctccc
tgcattttttttttttggtggtggtggtgggggaaca
ctagagacctttgtttccttatatctgtgagagtgcctgctccatgcata
aattaatctcagtggccagcatctccaaatacaaaagagtgctgatttgc
caggcatgagtcacatgctcccaatcaaaccaactcaaaaggtaaggagg
gatatttgcctcagtggcaaatctgtatatgtttaggatggaaggaagga
agcaatgatggatggatggatggatggatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_128248576_128249461
seq2: B6Ng01-170I14.b_41_927

seq1  GAATTCTAGTATTCCCAGAGATTTCTGGTATGGTCTCTATGTGCCAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTATTCCCAGAGATTTCTGGTATGGTCTCTATGTGCCAACAG  50

seq1  CATTATGCTGCGATCTATCTATCTTTGCACAAATGTGTAGCTGCCCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATGCTGCGATCTATCTATCTTTGCACAAATGTGTAGCTGCCCTGGT  100

seq1  GGAATAAACCACCTACTGTGCGTTGGAGAAGAAATCCCTTTTGTTTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAACCACCTACTGTGCGTTGGAGAAGAAATCCCTTTTGTTTCTCT  150

seq1  GTGGGCCACTTAGCTCATTCTCTCAGCTGCTATCCAAAGTCTCCACAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCACTTAGCTCATTCTCTCAGCTGCTATCCAAAGTCTCCACAAAG  200

seq1  GAGCCGAACTTTGTTTGCAAAGATTTCCCAGGAAACACAGTCACCATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGAACTTTGTTTGCAAAGATTTCCCAGGAAACACAGTCACCATCTG  250

seq1  TGGTGGCAGTGTCCTGCCCTGGTACCCTTGGCTTACTGTTCCTGTACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCAGTGTCCTGCCCTGGTACCCTTGGCTTACTGTTCCTGTACAGC  300

seq1  TAGCAGTCTCCAGTCTTCCCCACAGCATGCTCCTGAGACTGGTCCCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTCTCCAGTCTTCCCCACAGCATGCTCCTGAGACTGGTCCCTACT  350

seq1  TTATCCTCCACACAAAGCAAAGGGCAGGGTAAACCAGCAGTGACTACGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTCCACACAAAGCAAAGGGCAGGGTAAACCAGCAGTGACTACGTG  400

seq1  GTCCAGTAATGCAGGACTGGACAGCTTAATGCTGTGAGGAGAACCTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTAATGCAGGACTGGACAGCTTAATGCTGTGAGGAGAACCTTGTC  450

seq1  ACCCTTTACCCTGGGAACACTCTTGGTACACACACAGGAAAGACAAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTACCCTGGGAACACTCTTGGTACACACACAGGAAAGACAAGAGT  500

seq1  TAAGACAGGAGCTCTGGATCAAAACCACAGGGGGAAAGGTTAACAGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGGAGCTCTGGATCAAAACCACAGGGGGAAAGGTTAACAGAGTC  550

seq1  ATAAATGAAAGGACTGAGGCTGGAATGGCCAAAGAAAGGGCAAAGGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGAAAGGACTGAGGCTGGAATGGCCAAAGAAAGGGCAAAGGACAG  600

seq1  ATTGAAATTCGAGACCACTGGAGTATGGAATCAGAGTCTGGAGGCCACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATTCGAGACCACTGGAGTATGGAATCAGAGTCTGGAGGCCACTG  650

seq1  CTCACCCAGCTGCCCATTAGAACCAGACACGTAAAGCTTCAAAAATGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCAGCTGCCCATTAGAACCAGACACGTAAAGCTTCAAAAATGCAA  700

seq1  ATTCCTGCACTTGCCC-TTTGTCTATGGACTTGAATGTTTCTGGAGGTAA  749
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATTCCTGCACTTGCCCTTTTGTCTATGGACTTGAATGTTTCTGGAGGTAA  750

seq1  GCCGTCCCCCCTCTTCTTTTCCCTTTCCTTCCCTTCCCTCCCCTCTCTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCCCCCCTCTTCTTTTCCCTTTCCTTCCCTTCCCTCCCCTCTCTCT  800

seq1  TTCTTTCCTTCACTTCTTTTCTACCTCCTTCTCTCATACTTTTCTCTCCC  849
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCTTTCCTTCACTTCTTTTCTACCTCCCTCTCTCATACTTTTCTCTCCC  850

seq1  TGCATTTTTTTTTTTTGGTGGTGGTGGTGGTGGAACA  886
      |||||||||||||||||||||||||||||| ||||||
seq2  TGCATTTTTTTTTTTTGGTGGTGGTGGTGGGGGAACA  887

seq1: chr5_128394109_128394340
seq2: B6Ng01-170I14.g_74_305 (reverse)

seq1  TCCATCCATCCATCCATCCATCCATCATTGCTTCCTTCCTTCCATCCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCATCCATCCATCCATCCATCATTGCTTCCTTCCTTCCATCCTAA  50

seq1  ACATATACAGATTTGCCACTGAGGCAAATATCCCTCCTTACCTTTTGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATACAGATTTGCCACTGAGGCAAATATCCCTCCTTACCTTTTGAGT  100

seq1  TGGTTTGATTGGGAGCATGTGACTCATGCCTGGCAAATCAGCACTCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGATTGGGAGCATGTGACTCATGCCTGGCAAATCAGCACTCTTTT  150

seq1  GTATTTGGAGATGCTGGCCACTGAGATTAATTTATGCATGGAGCAGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGGAGATGCTGGCCACTGAGATTAATTTATGCATGGAGCAGGCAC  200

seq1  TCTCACAGATATAAGGAAACAAAGGTCTCTAG  232
      ||||||||||||||||||||||||||||||||
seq2  TCTCACAGATATAAGGAAACAAAGGTCTCTAG  232