BAC Information

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BAC

Clone NameB6Ng01-170K10
Chromosome5 (Build37)
Map Location 74,643,428 - 74,802,581
singlet/doubletdoublet
Overlap genenone
Upstream geneFryl, Ociad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18, Usp46, 2700023E23Rik, Rasl11b
Downstream geneScfd2, Fip1l1, Lnx1, EG619945, Chic2, Gsh2, LOC100039083, Olfr1401-ps1, Pdgfra, LOC100039125, LOC100039143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170K10.bB6Ng01-170K10.g
ACCDH961309DH961310
length1,0471,087
definitionDH961309|Mus musculus domesticus DNA, BAC clone: B6Ng01-170K10, 5' end.DH961310|Mus musculus domesticus DNA, BAC clone: B6Ng01-170K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,802,039 - 74,802,581)(74,643,428 - 74,644,518)
sequence
gaattcttggagaaggaatatcttgacagctgctccaaatgtttatgata
ttattattattttgataccatgtttacactttgcaagtactgatttctta
aagtcataatgtagaattgaaaatcatatcagtgaactttgtgggcctgc
ctgcctgcctgcctgccttcctttcttccttccttccttccttccttcct
tccttccttcctttttttatttacattaaattcattggcttatattttgg
atagatttttttcccccatgcctaattttgggagctttgattaaataaaa
gttacagaatttacaaattttcatatattttattgcacaattttgaaaaa
aaatcacatgtttatgtcactgttggtcctattagaaaaatctgtaagaa
tagagaatctggcaataccagagaaacgttttccaaaacttgaattttgc
ttagaagccaagattttatcagttgttttcctggaagaaccaagctcatt
ttgttgttcctgttgatgtttttcctcttgatacaaagtcttgctgtact
gtccaggctggctggtgcttgctgtgtgtcctaggctggtgttagattgg
attcctcctccctcaacatctcgggtgctgaaatgataggtatctgccac
catacccagcttcacttgattcgttgttgccaaatgccccatccttagta
attgccatttctttgtcattatttcaaggatcaatgacattacaccagac
cagcaattagttcagattcctcttcatcttttgccaagtgcctctctcag
agagaaatcactgtacagaagatggactggcttacacatcattttcattt
gtcatatacattattaaaaatgtggctgaagtccctcattgtccttgtcc
ttctatccccccccccccacttctacttgagtctctaaactgaaatggct
ggtatttgtaaccagcctcatgtcatcaagtgatccttaagtgaacctgt
tttccgtccttgttttcagggcagaggataagacctgaagttttctg
gaattccttttgggcctccattaaggagaaaaagcaatcagccctgatgg
gccaggttgataacactcgaattctcttcccacaccagcgcacaactgcc
ttcacttctgtagactctctgcctccttaccagggaagcaccatgctcag
agctggggaccaggcctaatgatacccatgtgccccctgctccccctcct
aggctacaagggttccattgtacactcatataacagacatggtgccttct
gaaagccaggtacccaggagatggtcaataaaactatcacaagcctggat
acaaaagaggctatgtgtgaacactgtgtgtgcacgtgcatgctcatgca
tgtatgtgccttcatgagtatgtttatggggggcgggtggcacaaacaaa
caaaacggaaacaaccctccttagagggaatgactgtggctttgggactc
tacatctccaaaagcctcctgtgggtggtaaaggggctgatggaggctga
tgctctggaggctgggacaactagacacatgctcttggacatctgcgaag
gcaccacaagttgatgacagtgctgagtgctgactgtgcttggcatgctg
gctgccacctcactggacatcactggtaaaagagggctagagagctagat
ttaagtggcaaggacagtcacgtgatagtcaaacttcagcatccgccaaa
tatccatcactaggagacaaagtgagtatgttcatctgttactgattaaa
aaaaaaaagatgttcatgctggagaaagagacaagagtaggttcctgaac
aggatatacagtagatgagctaaatggtctctgtctaccatgtagaggca
agcatatttataattaccagggtaccctggtaccaactgtaagcagtcat
tacagcacagtggttctcaacctgtgggtcgcaagctcttttagggtcac
atatagttatcctgcaggttagatttttacattacgattcataacgatag
cgaatttatagttatgagttagcatgaaatacttctatgtggggggcggt
cctccctaacgtgaggaaatggatccaaagggacagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_74802039_74802581
seq2: B6Ng01-170K10.b_550_1087 (reverse)

seq1  CAGAAAAC-TCAGGTCTTAT-CTCTAGCCCTGAAAACAAGGACGGAAACA  48
      |||||||| ||||||||||| |||| |||||||||||||||||||||| |
seq2  CAGAAAACTTCAGGTCTTATCCTCT-GCCCTGAAAACAAGGACGGAAA-A  48

seq1  CAGTTTCACTTAAGGATTCCCTTGATGACATGGGGCTGGGTAACAAATAC  98
      ||| |||||||||||| || |||||||||||| |||| ||| ||||||||
seq2  CAGGTTCACTTAAGGA-TCACTTGATGACATGAGGCT-GGTTACAAATAC  96

seq1  CAGCCATTTCAGTTCTAGAGACTCAAGTAGGAAGTGGGGGGGGGGGGGAT  148
      |||||||||||||| |||||||||||||| ||||| ||||||||||||||
seq2  CAGCCATTTCAGTT-TAGAGACTCAAGTA-GAAGT-GGGGGGGGGGGGAT  143

seq1  AG-AGGACAAGGACAATGAGGGACTTCAGCCACATTTTTAATAATGTATA  197
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGACAAGGACAATGAGGGACTTCAGCCACATTTTTAATAATGTATA  193

seq1  TGACAAAATGAAAATGATGTGTAAGCCAGTCCATCTTCTGTACAGTGATT  247
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAC-AAATGAAAATGATGTGTAAGCCAGTCCATCTTCTGTACAGTGATT  242

seq1  TCTCTCTGGGAGAGGCACTTGGCAAATGATGAAGAGGAATCTGAACTAAT  297
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  TCTCTCTGAGAGAGGCACTTGGCAAAAGATGAAGAGGAATCTGAACTAAT  292

seq1  TGCTGGTCTGGTGTAATGTCATTGATCCTTGAAATAATGACAAAGAAATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTCTGGTGTAATGTCATTGATCCTTGAAATAATGACAAAGAAATG  342

seq1  GCAATTACTAAGGATGGGGCATTTGGCAACAACGAATCAAGTGAAGCTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTACTAAGGATGGGGCATTTGGCAACAACGAATCAAGTGAAGCTGG  392

seq1  GTATGGTGGCAGATACCTATCATTTCAGCACCCGAGATGTTGAGGGAGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTGGCAGATACCTATCATTTCAGCACCCGAGATGTTGAGGGAGGA  442

seq1  GGAATCCAATCTAACACCAGCCTAGGACACACAGCAAGCACCAGCCAGCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCAATCTAACACCAGCCTAGGACACACAGCAAGCACCAGCCAGCC  492

seq1  TGGACAGTACAGCAAGACTTTGTATCAAGAGGAAAAACATCAACAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGTACAGCAAGACTTTGTATCAAGAGGAAAAACATCAACAG  538

seq1: chr5_74643428_74644518
seq2: B6Ng01-170K10.g_69_1155

seq1  GAATTCCTTTTGGGCCTCCATTAAGGAGAAAAAGCAATCAGCCCTGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTGGGCCTCCATTAAGGAGAAAAAGCAATCAGCCCTGATGG  50

seq1  GCCAGGTTGATAACACTCGAATTCTCTTCCCACACCAGCGCACAACTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTTGATAACACTCGAATTCTCTTCCCACACCAGCGCACAACTGCC  100

seq1  TTCACTTCTGTAGACTCTCTGCCTCCTTACCAGGGAAGCACCATGCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTCTGTAGACTCTCTGCCTCCTTACCAGGGAAGCACCATGCTCAG  150

seq1  AGCTGGGGACCAGGCCTAATGATACCCATGTGCCCCCTGCTCCCCCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGGACCAGGCCTAATGATACCCATGTGCCCCCTGCTCCCCCTCCT  200

seq1  AGGCTACAAGGGTTCCATTGTACACTCATATAACAGACATGGTGCCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTACAAGGGTTCCATTGTACACTCATATAACAGACATGGTGCCTTCT  250

seq1  GAAAGCCAGGTACCCAGGAGATGGTCAATAAAACTATCACAAGCCTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCAGGTACCCAGGAGATGGTCAATAAAACTATCACAAGCCTGGAT  300

seq1  ACAAAAGAGGCTATGTGTGAACACTGTGTGTGCACGTGCATGCTCATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGAGGCTATGTGTGAACACTGTGTGTGCACGTGCATGCTCATGCA  350

seq1  TGTATGTGCCTTCATGAGTATGTTTATGGGGGGCGGGTGGCACAAACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGCCTTCATGAGTATGTTTATGGGGGGCGGGTGGCACAAACAAA  400

seq1  CAAAACGGAAACAACCCTCCTTAGAGGGAATGACTGTGGCTTTGGGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACGGAAACAACCCTCCTTAGAGGGAATGACTGTGGCTTTGGGACTC  450

seq1  TACATCTCCAAAAGCCTCCTGTGGGTGGTAAAGGGGCTGATGGAGGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTCCAAAAGCCTCCTGTGGGTGGTAAAGGGGCTGATGGAGGCTGA  500

seq1  TGCTCTGGAGGCTGGGACAACTAGACACATGCTCTTGGACATCTGCGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGGAGGCTGGGACAACTAGACACATGCTCTTGGACATCTGCGAAG  550

seq1  GCACCACAAGTTGATGACAGTGCTGAGTGCTGACTGTGCTTGGCATGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACAAGTTGATGACAGTGCTGAGTGCTGACTGTGCTTGGCATGCTG  600

seq1  GCTGCCACCTCACTGGACATCACTGGTAAAAGAGGGCTAGAGAGCTAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCACCTCACTGGACATCACTGGTAAAAGAGGGCTAGAGAGCTAGAT  650

seq1  TTAAGTGGCAAGGACAGTCACGTGATAGTCAAACTTCAGCATCCGCCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGGCAAGGACAGTCACGTGATAGTCAAACTTCAGCATCCGCCAAA  700

seq1  TATCCATCACTAGGAGACAAAGTGAGTATGTTCATCTGTTACTGATTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATCACTAGGAGACAAAGTGAGTATGTTCATCTGTTACTGATTAAA  750

seq1  AAAAAAAAGATGTTCATGCTGGAGAAAGAGACAAGAGTAGGTTCCTGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGATGTTCATGCTGGAGAAAGAGACAAGAGTAGGTTCCTGAAC  800

seq1  AGGATATACAGTAGATGAGCTAAATGGTCTCTGTCTACCATGTAGAGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATACAGTAGATGAGCTAAATGGTCTCTGTCTACCATGTAGAGGCA  850

seq1  AGCATATTTATAATTACCAGGGTACCCTGGTACCAACTGTAAGCAGTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTTATAATTACCAGGGTACCCTGGTACCAACTGTAAGCAGTCAT  900

seq1  TACAGCACAGTGGTTCTCAACCTGTGGGTCGCAAGCCCTTTAAGGGTCAC  950
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  TACAGCACAGTGGTTCTCAACCTGTGGGTCGCAAGCTCTTTTAGGGTCAC  950

seq1  ATATAGGTTATCCTGCAGGTTAGATATTTACATTACGATTCATAACAATA  1000
      ||||| ||||||||||||||||||| |||||||||||||||||||| |||
seq2  ATATA-GTTATCCTGCAGGTTAGATTTTTACATTACGATTCATAACGATA  999

seq1  GCGAATTTATAGTTATGAGTTAGCAATGAAATAATTCTATGGTGGGGGGC  1050
      |||||||||||||||||||||||| |||||||| |||||| |||||||||
seq2  GCGAATTTATAGTTATGAGTTAGC-ATGAAATACTTCTAT-GTGGGGGGC  1047

seq1  GGTCACCACTAACGTGAGGAATTGTAT-CAAAGGGTCACAGC  1091
      ||||  | ||||||||||||| || || |||||||  |||||
seq2  GGTCCTCCCTAACGTGAGGAAATGGATCCAAAGGG--ACAGC  1087