BAC Information

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BAC

Clone NameB6Ng01-172M10
Chromosome5 (Build37)
Map Location 10,051,305 - 10,052,478
singlet/doubletsinglet
Overlap genenone
Upstream gene4930420K17Rik, Dmtf1, LOC654361, 9330182L06Rik, Grm3, LOC100042768
Downstream geneLOC625446, LOC435832, LOC100041395, LOC381612, EG625586, LOC242809, LOC623849, LOC100041408, LOC667880, EG667888, EG667901, EG667907
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172M10.bB6Ng01-172M10.g
ACCGA001304GA001305
length1,1891,228
definitionB6Ng01-172M10.b B6Ng01-172M10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgttatacattaaatatttttctagactttgatgatatagtca
caaatcatacataattatttaattatatgtttattttcatttgtataaca
ttaatgaaaaagtagattcaggctttaggaagaaattatttgtggtgttt
actatggaatccagccaattgatctgctctatagtttccatttggttgga
ttattctgtgactctttcatgaaatgtatctatatctaccacatgctcaa
taaaagttttataaaatgtaagctaatagcttattgataatgcacatcta
acttgaaaatagtgtggagagccgtgagcaattgccatcatgagcctcca
ctgtgtctaactggtaaacaagtaatgtgcgcaggtgcaagagtaaattc
gtgccaagtcactgcccatcccggagcgtagtgatgaggctctgggagag
cagccaatcaggtgtggatacgccacactaaggtgtatataagcagcgcc
tttttggtgcttggggtcttcctcttcatgttgaaactggtgtaataaag
ttgctgcagaaggatccggtttctcacgcgtgtgttcttgctggcgagac
aatagcgcatgtgagaaaatagcttcttacatttacatgaacacttacat
tttaattacctgaatccaaatgtcgagaaacttctctagctaaattattt
gttaaaatagactgtaaggtatctggtcagaaaatgaaatagaatagagg
cagaaataaacctattatagtaattattttggttaaatttgacctcaata
ttgtatttctaagtgcattcattggaagtagaacaatgcaagttttgatt
tctaaggtctggtttaatataaaatattcagaatatgttgtgatattttt
atgcatccaagaaaactatatttacttagaatatactataatgtacaaat
tcagataagattcagaaaaataagtcctccatagctttttttgtaaaaaa
atacttttaaaggtttataggttgggtattttttccacttcttccaggtc
ttcatcattcccagggcaatgaagtcaatccctatgcagtattactcatt
aatctggatgcagaggaaacgtactattctcctcaatgtcatcatggggt
ggctccttaggaaagggacatatttggggaagtcaacaa
gaattccaagcccatgatcttgctcaaggacatttctaggactgttggaa
cactggcagaaggctttagccatgtcagaattcaattttaaaaagcactt
ataataggaaaatactgaaagagagcacgtggatccatacactagactaa
cgcaggaatggaaaattaatgtatgggtagggaatgctagactccaggag
gagagcttccttgaaactcttttgcctcatgagtgacttttaagcctttc
ggcttgtccagctgactcaactggagagcgtaacacataagcatatcagt
tatttttttgttactgtgataacagaaagtttgttttggcttagtgttcc
atatggttaaagtccataattatgacaaatgcgtggtagccttggataag
agtgagagtatgaagcttctgggtaacacctttgacctttgacctttgac
ctttgaccaggaaagcaagagagggagtaggacttgaagaaacactatca
attctcagaatctgtcaccagtgctggacttagtccaacaaggctatacc
tcctgcaagtttcacattctccccaaagagccaccaactcgaatcaagtg
acatgagcctatgctggtgataatgctgctctttaaaccttcagggtacc
aaagagaaccccagtgcagggtgtgaactacttctaactgagtttttact
caaggatgtgttagagactccaagaacaatacaggctattgctgtactca
ttataaacagtataaagttatttataacaactagagaaattttagagata
gtaatgtctggtgtttaggaaatacttatactctccaaattaaatttgca
tgtatattttgctcttttaagtgtgttcaaatgtgtatagatatgtacca
agcaacacaaacttgaacaagttttgtaagtaatctgccaagaagcccac
acaaggagtgaagtgtattgattcccaagactttataggtagcagaagtg
ggcagtgattttatttatgaaactccctggcgggatgaagcacatcccca
gaggaacctcattgtttgtcagccatgtaagacggattatcacatgtgtt
agcaatgatcatggaagaccaatgctagccctgagatgaagcattaatgg
ccgaggtttagcttggttaattttctggaactggttttccatgtgcatat
aatggtccacgagcagacttactattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_10051305_10052478
seq2: B6Ng01-172M10.b_43_1231

seq1  GAATTCCTGTTATACATTAAATATTTTTCTAGACTTTGATGATATAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTATACATTAAATATTTTTCTAGACTTTGATGATATAGTCA  50

seq1  CAAATCATACATAATTATTTAATTATATGTTTATTTTCATTTGTATAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCATACATAATTATTTAATTATATGTTTATTTTCATTTGTATAACA  100

seq1  TTAATGAAAAAGTAGATTCAGGCTTTAGGAAGAAATTATTTGTGGTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAAAAAGTAGATTCAGGCTTTAGGAAGAAATTATTTGTGGTGTTT  150

seq1  ACTATGGAATCCAGCCAATTGATCTGCTCTATAGTTTCCATTTGGTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGGAATCCAGCCAATTGATCTGCTCTATAGTTTCCATTTGGTTGGA  200

seq1  TTATTCTGTGACTCTTTCATGAAATGTATCTATATCTACCACATGCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTGTGACTCTTTCATGAAATGTATCTATATCTACCACATGCTCAA  250

seq1  TAAAAGTTTTATAAAATGTAAGCTAATAGCTTATTGATAATGCACATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTTTATAAAATGTAAGCTAATAGCTTATTGATAATGCACATCTA  300

seq1  ACTTGAAAATAGTGTGGAGAGCCGTGAGCAATTGCCATCATGAGCCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAAATAGTGTGGAGAGCCGTGAGCAATTGCCATCATGAGCCTCCA  350

seq1  CTGTGTCTAACTGGTAAACAAGTAATGTGCGCAGGTGCAAGAGTAAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTAACTGGTAAACAAGTAATGTGCGCAGGTGCAAGAGTAAATTC  400

seq1  GTGCCAAGTCACTGCCCATCCCGGAGCGTAGTGATGAGGCTCTGGGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAGTCACTGCCCATCCCGGAGCGTAGTGATGAGGCTCTGGGAGAG  450

seq1  CAGCCAATCAGGTGTGGATACGCCACACTAAGGTGTATATAAGCAGCGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAATCAGGTGTGGATACGCCACACTAAGGTGTATATAAGCAGCGCC  500

seq1  TTTTTGGTGCTTGGGGTCTTCCTCTTCATGTTGAAACTGGTGTAATAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTGCTTGGGGTCTTCCTCTTCATGTTGAAACTGGTGTAATAAAG  550

seq1  TTGCTGCAGAAGGATCCGGTTTCTCACGCGTGTGTTCTTGCTGGCGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCAGAAGGATCCGGTTTCTCACGCGTGTGTTCTTGCTGGCGAGAC  600

seq1  AATAGCGCATGTGAGAAAATAGCTTCTTACATTTACATGAACACTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCGCATGTGAGAAAATAGCTTCTTACATTTACATGAACACTTACAT  650

seq1  TTTAATTACCTGAATCCAAATGTCGAGAAACTTCTCTAGCTAAATTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTACCTGAATCCAAATGTCGAGAAACTTCTCTAGCTAAATTATTT  700

seq1  GTTAAAATAGACTGTAAGGTATCTGGTCAGAAAATGAAATAGAATAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAATAGACTGTAAGGTATCTGGTCAGAAAATGAAATAGAATAGAGG  750

seq1  CAGAAATAAACCTATTATAGTAATTATTTTGGTTAAATTTGACCTCAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAAACCTATTATAGTAATTATTTTGGTTAAATTTGACCTCAATA  800

seq1  TTGTATTTCTAAGTGCATTCATTGGAAGTAGAACAATGCAAGTTTTGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTCTAAGTGCATTCATTGGAAGTAGAACAATGCAAGTTTTGATT  850

seq1  TCTAAGGTCTGGTTTAATATAAAATATTCAGAATATGTTGTGATATTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGTCTGGTTTAATATAAAATATTCAGAATATGTTGTGATATTTTT  900

seq1  ATGCATCCAAG-AAACTATATTTACTTTAGAATATACTATAATGTACAAA  949
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  ATGCATCCAAGAAAACTATATTTAC-TTAGAATATACTATAATGTACAAA  949

seq1  -TCAGATAAGATTCAGAAAAATAAGT-CTCCATAGC-TTTTTTGT-AAAA  995
       ||||||||||||||||||||||||| ||||||||| |||||||| ||||
seq2  TTCAGATAAGATTCAGAAAAATAAGTCCTCCATAGCTTTTTTTGTAAAAA  999

seq1  AATACTTTTAAA-GTTTATAG--TTGGTA-TTTTTCCACTTCCTCCA-GT  1040
      |||||||||||| ||||||||  | |||| |||||||||||| |||| ||
seq2  AATACTTTTAAAGGTTTATAGGTTGGGTATTTTTTCCACTTCTTCCAGGT  1049

seq1  CTTCCATCA-TCCCAGGCAAATGAAGTC-ATCCCTATGCAGTATTTACTC  1088
      ||| ||||| |||||||  ||||||||| |||||||||||||| ||||||
seq2  CTT-CATCATTCCCAGGGCAATGAAGTCAATCCCTATGCAGTA-TTACTC  1097

seq1  ATTTATCT-GATGCAGAAGAAACGTACCTATTCT-CTCCATGTCATCAT-  1135
      ||| |||| |||||||| |||||||| ||||||| ||| |||||||||| 
seq2  ATTAATCTGGATGCAGAGGAAACGTA-CTATTCTCCTCAATGTCATCATG  1146

seq1  GGGTGGCTCC-TAG--AAGGGACATAATT-GGGATGTCAACAA  1174
      |||||||||| |||  |||||||||| || |||| ||||||||
seq2  GGGTGGCTCCTTAGGAAAGGGACATATTTGGGGAAGTCAACAA  1189