BAC Information

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BAC

Clone NameB6Ng01-174M13
Chromosome5 (Build37)
Map Location 56,835,190 - 56,836,155
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666405
Downstream geneLOC100041335, LOC100041349, LOC666455
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174M13.bB6Ng01-174M13.g
ACCGA002765GA002766
length1,255967
definitionB6Ng01-174M13.b B6Ng01-174M13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacttgatatgcacttaatgatacgtggatagtagcccagaaacc
tagaatacccaagatacaatttccaaaacacaagaaaatcaagaaggaag
gccaatgcgtggatacttcattcctccttagaatagggaataaacaccca
tggaaggagttgcagagacaaagtttggtgctaagatgaaaggagggacc
atccagagactgccccacccagggttccatcccatccataatcagccacc
aaatgaagacactatttcagcaagattttgctgaaaggaccctgatatag
ctgtctcctgtgaggctatgccagtgtctggcaaatacagaagtggatgc
tcacagtcatctattggatggaacacagggcccccaatgggggagctaga
gaaagtacccaaggagctgaaggggtctgcaaccctataggtggaacaac
aatatgaactaaccagtacacccagagctcctgtctctaactgcatatgt
agcagaagttggtctactaggccatcgttgggaagagagaccccttggtc
tagcaaacttcatatgccccagtacacggaatgccagcgccaagaagtgg
tagtgagtgggtaggggaccaggtcaggggggaaggtacagggaagtttc
agaatagcatttgagatgtaaatgaggaaaatatctattaaaaaatttaa
gaagaagtctctgaaaatgaaaatatgcttacatcactcatatcaatgtc
aagtgaaccaatttaggattcatggcatttcattctgacctcaaatatac
tgttgtggtacatattgtatctctactatttctgtacccagactccacta
attgatttcctgaaaattgcacataattctatatttttcatcaatgttca
tatcttagtagcccataaataatatatacatttcttattaaaggaaattt
gtaataagtcaaccattttcttgatatctttactttcaccccatttctcg
ctttagagggtattcctttcataaaatttaacagaacatcagtctatcaa
ttggcggattacttaattattaattattatttatttcattctctcagaag
ctctcttattgaagaaaaccattattattcctataattccaagggaaata
tcattcttaatataaattggctccactagattagtcattctactactgat
ggatccagaattattaaatacatgtgaattccttatgcaaagaccaccat
ccact

gaattctcacaaggatttatccctgaaaaaagagatacaggtaatgagta
gtttctgagaggaagactcaattttctttactcacaagccccctgagaag
ttaacaaattacaaaaagcgagccatatacacatatgggaaacatgtaat
gatttcattattatatatttggcacacacacaagcacacacacatacaca
cccgcacatacatcacacaaacacacacacaacacacccatatattgtat
ataacattcacacacacgtggttacacacatgtggtccttgtgtataagt
aatacaattacagattaagaggcctttcatatacaaagaagtgggaagga
attggaagaagttggagtgagagagtgagacagcagaattatattaacag
aatatccatgcataaaactcaaaatagtaaattaaataaattaaaaaata
aaaacgtcattacaatacatcagtgaatgtctctgggtatgactgctcta
agacactaagcctctagacctcatcatcttccaaaataatattacatgat
attactaatatagatgttacatgcacacttacaaccatcgagagaataca
ttattgtatcatatcatattatatcatattgcagttactttatatgattt
gtgtattttaaggagttgagatggaaaccaagacatgcatctttattgtc
tcctatataataatctagaaacctattttcaaactgtttttgtccctttt
cctttcttcccatggaattctttatcatctagtgctattatcttgcttcg
ttaaaattttatctcaacccacatttttttgggttgttattgtcaaatat
atttcatttctaagggctattggactaatataccaaatatatacccctat
gtgaatgcatatatatatatatatacatatacatatatatatgtgtgtgt
gtatgtgtatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_56835190_56836155
seq2: B6Ng01-174M13.g_66_1032

seq1  GAATTCTCACAAGGATTTATCCCTGAAAAAAGAGATACAGGTAATGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAAGGATTTATCCCTGAAAAAAGAGATACAGGTAATGAGTA  50

seq1  GTTTCTGAGAGGAAGACTCAATTTTCTTTACTCACAAGCCCCCTGAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGAGAGGAAGACTCAATTTTCTTTACTCACAAGCCCCCTGAGAAG  100

seq1  TTAACAAATTACAAAAAGCGAGCCATATACACATATGGGAAACATGTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAATTACAAAAAGCGAGCCATATACACATATGGGAAACATGTAAT  150

seq1  GATTTCATTATTATATATTTGGCACACACACAAGCACACACACATACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATTATTATATATTTGGCACACACACAAGCACACACACATACACA  200

seq1  CCCGCACATACATCACACAAACACACACACAACACACCCATATATTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCACATACATCACACAAACACACACACAACACACCCATATATTGTAT  250

seq1  ATAACATTCACACACACGTGGTTACACACATGTGGTCCTTGTGTATAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATTCACACACACGTGGTTACACACATGTGGTCCTTGTGTATAAGT  300

seq1  AATACAATTACAGATTAAGAGGCCTTTCATATACAAAGAAGTGGGAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATTACAGATTAAGAGGCCTTTCATATACAAAGAAGTGGGAAGGA  350

seq1  ATTGGAAGAAGTTGGAGTGAGAGAGTGAGACAGCAGAATTATATTAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAGAAGTTGGAGTGAGAGAGTGAGACAGCAGAATTATATTAACAG  400

seq1  AATATCCATGCATAAAACTCAAAATAGTAAATTAAATAAATTAAAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCATGCATAAAACTCAAAATAGTAAATTAAATAAATTAAAAAATA  450

seq1  AAAACGTCATTACAATACATCAGTGAATGTCTCTGGGTATGACTGCTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGTCATTACAATACATCAGTGAATGTCTCTGGGTATGACTGCTCTA  500

seq1  AGACACTAAGCCTCTAGACCTCATCATCTTCCAAAATAATATTACATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTAAGCCTCTAGACCTCATCATCTTCCAAAATAATATTACATGAT  550

seq1  ATTACTAATATAGATGTTACATGCACACTTACAACCATCGAGAGAATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAATATAGATGTTACATGCACACTTACAACCATCGAGAGAATACA  600

seq1  TTATTGTATCATATCATATTATATCATATTGCAGTTACTTTATATGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTATCATATCATATTATATCATATTGCAGTTACTTTATATGATTT  650

seq1  GTGTATTTTAAGGAGTTGAGATGGAAACCAAGACATGCATCTTTATTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTTAAGGAGTTGAGATGGAAACCAAGACATGCATCTTTATTGTC  700

seq1  TCCTATATAATAATCTAGAAACCTATTTTCAAACTGTTTTTGTCCCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATATAATAATCTAGAAACCTATTTTCAAACTGTTTTTGTCCCTTTT  750

seq1  CCTTTCTTCCCATGGAATTCTTTATCATCTAGTGCTATTATCTTGCTTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTCCCATGGAATTCTTTATCATCTAGTGCTATTATCTTGCTTCG  800

seq1  TTAAAATTTTATCTCAACCCACA-TTTTTTGGGTTGTTATTGTCAAATAT  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTAAAATTTTATCTCAACCCACATTTTTTTGGGTTGTTATTGTCAAATAT  850

seq1  ATTTCATTTCTAAGGGCTATTGGACTAATATACCAAATATATACCCCTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTCTAAGGGCTATTGGACTAATATACCAAATATATACCCCTAT  900

seq1  GTGAATGCATATATATATATATATACATATACATATATATATGTGTGTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGCATATATATATATATATACATATACATATATATATGTGTGTGT  950

seq1  GTATGTGTATATATATA  966
      |||||||||||||||||
seq2  GTATGTGTATATATATA  967


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