BAC Information

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BAC

Clone NameB6Ng01-175H07
Chromosome5 (Build37)4 (Build37)
Map Location 142,872,124 - 142,872,395129,327,504 - 129,327,577
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSdk1, LOC666727
Downstream geneFoxk1, C330006K01Rik, D930005D10Rik, Papolb, Mmd2, Wipi2, Slc29a4, Tnrc18, LOC100038954, LOC100041004, LOC100038972, LOC100038984, LOC100042525, LOC100038888, Zfp469, LOC666788, Fbxl18, D430018E03Rik, LOC100042558, Actb, Fscn1, 2810055G22Rik, LOC667809
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175H07.bB6Ng01-175H07.g
ACCGA003257GA003258
length27274
definitionB6Ng01-175H07.b B6Ng01-175H07.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,872,124 - 142,872,395)(129,327,504 - 129,327,577)
sequence
agcttcccacattttcattgttcaagggctctttttcaaaccggctcttt
tcttgcctctctctggtagctgtcaatatagccaatgaattactgtttaa
ggaaaaaggaattgaatagatgtctagacttgccaaggtcagggtgagct
ggctctgcagctcttgatatcattactataccatttcttccttcttggca
gagaaagaggagaagagaaggaaggaaggagagaaggaaggaaggagaga
aggaaggaaggagggaaggaag
actctgtagaccaggctggcctcgaactcagagatccacctacctctgcc
tcccaagtgctgggattaaaggcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_142872124_142872395
seq2: B6Ng01-175H07.b_51_322

seq1  AGCTTCCCACATTTTCATTGTTCAAGGGCTCTTTTTCAAACCGGCTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCCACATTTTCATTGTTCAAGGGCTCTTTTTCAAACCGGCTCTTT  50

seq1  TCTTGCCTCTCTCTGGTAGCTGTCAATATAGCCAATGAATTACTGTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTCTCTCTGGTAGCTGTCAATATAGCCAATGAATTACTGTTTAA  100

seq1  GGAAAAAGGAATTGAATAGATGTCTAGACTTGCCAAGGTCAGGGTGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGGAATTGAATAGATGTCTAGACTTGCCAAGGTCAGGGTGAGCT  150

seq1  GGCTCTGCAGCTCTTGATATCATTACTATACCATTTCTTCCTTCTTGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGCAGCTCTTGATATCATTACTATACCATTTCTTCCTTCTTGGCA  200

seq1  GAGAAAGAGGAGAAGAGAAGGAAGGAAGGAGAGAAGGAAGGAAGGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGGAGAAGAGAAGGAAGGAAGGAGAGAAGGAAGGAAGGAGAGA  250

seq1  AGGAAGGAAGGAGGGAAGGAAG  272
      ||||||||||||||||||||||
seq2  AGGAAGGAAGGAGGGAAGGAAG  272

seq1: chr4_129327504_129327577
seq2: B6Ng01-175H07.g_66_139 (reverse)

seq1  CGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTT  50
      |||||||||||||||||||||||||||||||| |||  ||| ||||||||
seq2  CGCCTTTAATCCCAGCACTTGGGAGGCAGAGGTAGGTGGATCTCTGAGTT  50

seq1  CGAGGCCAGCCTGGTCTACAGAGT  74
      ||||||||||||||||||||||||
seq2  CGAGGCCAGCCTGGTCTACAGAGT  74