MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-177G05
Chromosome	5 (Build37)
Map Location	40,701,921 - 40,702,550
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC384174, Hs3st1, EG665839
Downstream gene	LOC100040502
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC384174 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384174
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Hs3st1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15476 MGI:1201606
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665839 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665839 MGI:3646286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 559 ESTs, 21 Proteins

name	LOC100040502 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs, 5 Proteins

name	Hs3st1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754245 GeneID:15476 MGI:1201606
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heparan sulfate (glucosamine) 3-O-sulfotransferase 1 transcript_id : NM_010474.1

name	EG665839 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374715 GeneID:665839 MGI:3646286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 559 ESTs, 21 Proteins product : predicted gene, EG665839 transcript_id : XM_979793.1

name	LOC100040502 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253863 GeneID:100040502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs, 5 Proteins product : similar to CBF1 interacting corepressor transcript_id : XM_001474823.1

name	Hs3st1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754246 CCDS:CCDS19257.1 GeneID:15476 MGI:1201606
definition	GO_function : GO:0008467 - heparin-glucosamine 3-O-sulfotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 function : rate limiting enzyme for the synthesis of anticoagulant heparan sulfate product : heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein_id : NP_034604.1

name	EG665839 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374716 GeneID:665839 MGI:3646286
definition	codon_start : 1 product : similar to DnaJ-like protein protein_id : XP_984887.1

name	LOC100040502 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253864 GeneID:100040502
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474873.1

name	LOC384174 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384174
definition	number : 1 pseudo : _no_value

clone name	MSMg01-404B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306K13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-183E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280M07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-177G05.b	B6Ng01-177G05.g
ACC	GA004672	GA004673
length	992	1,158
definition	B6Ng01-177G05.b	B6Ng01-177G05.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctattgattataatcaggatagatctgtgagaagagatcacacct ggccaaaagttgtcctatagatgtaaatgtatgttattttcctctaagaa gaaatgagagaacacatgtctcattgtgatgctcagaggcaacaatgtca ctaaaatcctatggatggaactgtatacatcaaaaacaaggttcacatta tgaaacatagctgctcctgtgtgctattcctttgacaatgaattgtcttc tgattgggttctagtgtggttcatgctgtcagattgtaatgcatacaaac aatgccaaattctcttaacctattttatgcaactcaaaattacatcccac atgatcagtcttaggaaaaggatacaatgcatcttgttatgttcagagaa agcagctaaaagtaagtatgttattgtaggaaaaggactgagaacctcaa tgcttctacttacttttgtcagtaataaagtaacaaggtaggattgtctt ctgctaaaagtagctgtaatgcaacatttaaattaagtttgacctgaccc tattactgatgctatgctttgcttcagacagaagcctagcatggctgctc tttgagagactctacaagcagctgactgaaacatatgtgcatatttacag cccatcactggactgagtcagggaatcctatggaatagtcagagaaagaa ctgaatgaactgaaggagatggcagccccagataaagacgaactgtgtca actaaccttgacacctggtagctctaggggactaagtcaccaaccaaaga tcatataatgtttggtctatgaccccaggaacctatgtagtagaggactg acttccttgtcaggccacaataaaagaggatgcttctaatactgtaggca cttgatgccctagaaaaacaaatgcccagacagcatcctctcataggcaa agggaggtgggatgggcaagaactctgaaggggtaaaggagg	gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg ttcaacatccttaatcatcaggaaatgcaaattaaaacaaccctgagatt ccacctcataccggtcagaatggctaagatcaaaaattcaggtgacagca gatgctggtgaggatgtggagaaagcggaacactcctccactgttggtgg gattgcaagcctgtacaactactctggaaatcagtctggaggcttttcag aaaattggacataatacgatgggaggatcatgcaatacctctcctgggca tatatccagaagatgccccaaccggtaagaaggacacatgctctactatg ttcatagcagcgttatttataatagccagaagctgggaagaacccagata cccctcatcagaggaatggatacagaaaatgtggtacatttacaaaatgc agtactacttagttattaaaaagaatgaatttatgaaattcctagctaaa tggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaag aaactcacacaatgtgtagtcactgataagtggatattagccccaaaact taggatacccaagatataagatacaaattgctaaacgcatgaaactcaag gagaacgaagaccaatgtgtggacactgtgccccttcttagaattgggaa caaaacacccatggaaggaattacagagacaaagtttgggagctgtgaag aaaggatggaccatctagagactgccatatgcagggatccattccataat cagcttccaaactctgacacattgcatacactagcaagattttgctgaag gacccagatagagctgttctccttgtaagactatgccgggcctagcaaac acagaagctattggaatggattacaggcccctagtggaggagctagagaa agtaccaaggaagctatagggatcttgcaatctaagtggacaacattatg aactaaccagtgctccgggagcctctgacctcatagcctggctatatgtt tcaaaagatggctattcgccattcactggaaggaaggcatttgactgcca cttatgtctctagacatggtaaccatggtctaaatggagattgcggtaca ttggtatg
quality values	Open. Hide. 58 34 27 28 58 58 54 54 54 62 62 41 41 47 56 56 56 46 49 41 38 62 62 47 47 62 62 47 47 62 54 54 62 62 47 59 43 49 59 62 62 44 44 59 62 62 62 62 62 62 43 49 62 59 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 47 62 62 62 42 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 49 62 54 38 62 62 62 62 62 62 62 62 62 52 54 39 58 58 58 54 52 58 52 58 58 58 51 52 58 54 58 52 52 54 58 52 58 58 39 47 58 58 54 58 46 58 54 54 58 58 58 54 35 58 58 58 54 49 58 49 46 50 54 54 52 52 58 58 54 41 58 54 54 52 54 58 52 58 58 58 58 52 58 58 54 42 52 58 52 52 52 58 58 35 54 58 51 52 46 58 52 52 54 58 52 58 58 50 51 58 47 58 58 50 51 40 58 46 47 38 53 53 51 46 51 32 58 53 53 50 50 53 58 52 51 33 54 53 45 49 50 50 46 53 53 53 58 50 54 49 39 53 50 49 58 58 40 52 39 53 53 58 50 37 53 53 46 53 53 49 49 41 37 50 52 54 32 53 53 50 15 31 41 54 41 37 52 58 50 52 52 52 51 39 41 42 42 39 52 53 40 42 58 31 53 58 51 41 41 33 32 52 53 44 38 42 53 41 38 50 52 53 52 49 21 51 49 19 35 20 50 51 39 40 33 54 54 54 51 31 39 46 30 26 54 51 37 34 26 20 54 22 34 52 53 42 54 40 39 33 33 47 42 45 37 31 53 34 52 52 30 33 34 34 52 40 53 37 40 53 32 39 45 45 45 32 37 54 54 37 31 26 35 26 52 26 34 40 31 31 35 31 40 32 45 28 51 33 31 30 31 40 35 37 32 45 31 39 36 41 18 52 36 36 30 23 45 34 31 32 26 31 25 51 51 45 24 36 37 34 31 25 51 34 28 31 42 39 36 39 29 37 27 45 24 31 32 18 32 32 27 29 31 31 26 30 27 31 39 24 36 17 31 27 33 24 18 31 23 30 38 33 46 46 33 11 32 28 24 31 16 29 31 23 38 35 35 30 27 27 28 30 31 36 16 21 27 15 14 13 28 28 33 27 22 21 31 23 47 25 30 31 23 44 44 47 44 24 19 22 44 19 21 36 24 44 21 16 22 31 19 23 32 31 21 25 29 22 27 31 32 32 21 25 7 14 11 7 17 32 4 23 43 27 33 14 28 9 24 39 33 19 10 25 40 31 13 16 20 9 21 17 16 32 32 9 16 4 8 21 47 47 17 6 21 34 6 11 6 3 15 27	Open. Hide. 62 49 43 37 62 62 62 47 42 62 62 62 56 24 16 28 23 22 34 24 21 28 32 46 59 59 62 59 59 62 62 62 49 59 62 59 62 59 59 62 62 62 54 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 56 59 59 48 54 59 46 56 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 54 54 54 59 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 54 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 56 43 62 62 52 62 62 62 62 62 62 62 62 62 62 54 62 47 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 58 58 58 49 58 58 58 58 58 58 58 58 58 54 58 42 58 58 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 54 58 58 54 58 54 54 58 58 58 58 58 58 53 54 58 58 49 54 58 58 54 54 58 58 58 40 58 58 58 58 58 58 58 54 42 50 58 47 54 58 58 51 58 58 58 45 42 58 51 58 58 46 41 58 58 42 50 58 51 49 54 54 58 58 58 58 53 53 58 49 49 58 47 58 50 54 46 58 50 58 58 58 53 51 41 58 58 50 50 44 30 42 47 52 50 51 50 52 37 51 52 58 40 58 53 51 39 38 53 32 51 51 52 58 40 32 58 50 50 58 41 51 35 40 41 41 54 37 51 54 54 41 24 49 49 34 38 54 35 37 40 41 37 34 37 35 44 37 40 52 29 31 37 40 49 39 53 53 54 53 42 51 40 49 40 52 51 54 40 53 41 33 30 33 33 53 32 39 45 53 46 47 37 52 30 17 15 29 53 46 23 51 52 33 21 47 52 25 47 20 52 31 31 31 34 29 53 45 46 28 26 28 34 45 34 32 32 33 19 46 40 52 31 29 32 25 26 32 26 52 47 28 33 31 51 36 18 31 30 24 40 45 29 31 29 38 51 33 25 29 41 19 27 21 21 46 26 23 14 28 20 31 20 29 32 15 25 31 33 47 31 32 37 48 31 13 46 13 43 17 27 31 33 20 31 31 33 23 33 41 33 24 26 30 20 43 32 31 22 31 31 34 25 25 18 18 42 32 31 22 32 38 11 32 11 21 35 34 31 32 26 11 48 39 30 30 21 43 10 12 6 5 11 6 14 13 35 31 28 26 31 23 34 22 33 11 30 41 30 11 26 22 32 27 31 24 19 48 26 28 27 31 11 10 16 13 32 24 26 35 35 18 11 22 31 16 23 13 48 48 21 6 5 7 13 36 7 5 9 24 11 38 31 30 13 29 20 31 16 32 21 20 24 31 12 6 16 11 6 10 14 14 9 7 5 10 6 30 21 31 22 32 15 14 17 6 36 31 13 24 17 21 10 15 13 48 32 11 5 12 8 8 11 30 10 26 7 5 7 32 12 28 13 11 15 19 19 14 22 32 22 17 10 22 13 8 21 29 21 6 7 4 6 21 8 18 9 12 19 11 24 16 20 7 8 4 5 11 14 6 4 9 26 27 8 15 13 11 10 8 6 9 28 9 6 5 13 34 23 8 7 10 11 10 19 15 15 13 7 28 14 13 19 11 4 16 14 8 7 8 5 6 4 15 14 8 6 6 24 13 15 6 5 21 6 20 4 3 4 14 5 6 9 22 10 9 9 18 9 13 5 6 7 19 18 8 7 5 11 5 5 5 7 4 6 4 6 7 10 10 16 4 6 5 5 11 4 4 2 7 6 29 24 10 5 17 4 12 13 22 4 14 4 5 2 2 2 8 9 8 6 10 5 7 3 4 6 3 2 4 4 7 6 4 2 3 2 10 13 9 11 6 4 9 5 7 7 6 5 3 1 3 6 3 3 7 7 15 4 3 3 4 6 4 3 13 22 5 11 6 6 22 6 8 18 8 4 16 4 6 4 9 2 3 23 4 5 4 2 1 9 5 12 7 4 6 7 5 6 6 21 11 3 4 6 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_40701921_40702550
seq2: B6Ng01-177G05.b_51_680 (reverse)

seq1  TTCAGTCAGCTGCTTGTAGAGTCTCTCAAAGAGCAGCCATGCTAGGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCAGCTGCTTGTAGAGTCTCTCAAAGAGCAGCCATGCTAGGCTTC  50

seq1  TGTCTGAAGCAAAGCATAGCATCAGTAATAGGGTCAGGTCAAACTTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAAGCAAAGCATAGCATCAGTAATAGGGTCAGGTCAAACTTAATT  100

seq1  TAAATGTTGCATTACAGCTACTTTTAGCAGAAGACAATCCTACCTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTGCATTACAGCTACTTTTAGCAGAAGACAATCCTACCTTGTTA  150

seq1  CTTTATTACTGACAAAAGTAAGTAGAAGCATTGAGGTTCTCAGTCCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTACTGACAAAAGTAAGTAGAAGCATTGAGGTTCTCAGTCCTTTT  200

seq1  CCTACAATAACATACTTACTTTTAGCTGCTTTCTCTGAACATAACAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAATAACATACTTACTTTTAGCTGCTTTCTCTGAACATAACAAGAT  250

seq1  GCATTGTATCCTTTTCCTAAGACTGATCATGTGGGATGTAATTTTGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTATCCTTTTCCTAAGACTGATCATGTGGGATGTAATTTTGAGTT  300

seq1  GCATAAAATAGGTTAAGAGAATTTGGCATTGTTTGTATGCATTACAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAAATAGGTTAAGAGAATTTGGCATTGTTTGTATGCATTACAATCT  350

seq1  GACAGCATGAACCACACTAGAACCCAATCAGAAGACAATTCATTGTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCATGAACCACACTAGAACCCAATCAGAAGACAATTCATTGTCAAA  400

seq1  GGAATAGCACACAGGAGCAGCTATGTTTCATAATGTGAACCTTGTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGCACACAGGAGCAGCTATGTTTCATAATGTGAACCTTGTTTTTG  450

seq1  ATGTATACAGTTCCATCCATAGGATTTTAGTGACATTGTTGCCTCTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATACAGTTCCATCCATAGGATTTTAGTGACATTGTTGCCTCTGAGC  500

seq1  ATCACAATGAGACATGTGTTCTCTCATTTCTTCTTAGAGGAAAATAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATGAGACATGTGTTCTCTCATTTCTTCTTAGAGGAAAATAACAT  550

seq1  ACATTTACATCTATAGGACAACTTTTGGCCAGGTGTGATCTCTTCTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACATCTATAGGACAACTTTTGGCCAGGTGTGATCTCTTCTCACA  600

seq1  GATCTATCCTGATTATAATCAATAGAATTC  630
      ||||||||||||||||||||||||||||||
seq2  GATCTATCCTGATTATAATCAATAGAATTC  630

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information