MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-179M01
Chromosome	5 (Build37)
Map Location	9,473,571 - 9,474,585
singlet/doublet	singlet
Overlap gene	9330182L06Rik
Upstream gene	Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1, LOC654361
Downstream gene	Grm3, LOC100042768, LOC625446, LOC435832, LOC100041395, LOC381612
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gm440 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242819 MGI:2685286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18671 MGI:97570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG330031 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330031 MGI:3643983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Abcb1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18669 MGI:97568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18670 MGI:97569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crot (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74114 MGI:1921364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930420K17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:652925 MGI:3606159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmtf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23857 MGI:1344415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC654361 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654361
definition	note : protein phosphatase 1, regulatory (inhibitor) subunit 14B pseudogene pseudo : _no_value

name	9330182L06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231014 MGI:2443264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grm3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108069 MGI:1351340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042768 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC625446 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC435832 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435832
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100041395 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041395
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	LOC381612 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:381612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 23 ESTs, 2 Proteins pseudo : _no_value

name	Gm440 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930588 GeneID:242819 MGI:2685286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 440, (NCBI) transcript_id : NM_198620.1

name	Abcb1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755047 GeneID:18671 MGI:97570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 1A transcript_id : NM_011076.1

name	EG330031 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374177 GeneID:330031 MGI:3643983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG330031, transcript variant 1 transcript_id : XM_900508.2

name	Abcb1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755045 GeneID:18669 MGI:97568
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 1B transcript_id : NM_011075.1

name	Abcb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679296 GeneID:18670 MGI:97569
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 4 transcript_id : NM_008830.1

name	Crot (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387204 GeneID:74114 MGI:1921364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carnitine O-octanoyltransferase transcript_id : NM_023733.3

name	4930420K17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486625 GeneID:652925 MGI:3606159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930420K17 gene transcript_id : NM_001081029.1

name	Dmtf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560525 GeneID:23857 MGI:1344415
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin D binding myb-like transcription factor 1 transcript_id : NM_011806.2

name	9330182L06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353435 GeneID:231014 MGI:2443264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9330182L06 gene transcript_id : NM_172706.3

name	Grm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130617 GeneID:108069 MGI:1351340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, metabotropic 3 transcript_id : NM_181850.2

name	Gm440 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930589 CCDS:CCDS19083.1 GeneID:242819 MGI:2685286
definition	codon_start : 1 product : hypothetical protein LOC242819 protein_id : NP_941022.1

name	Abcb1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755048 CCDS:CCDS19084.1 GeneID:18671 MGI:97570
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042623 - ATPase activity, coupled [Evidence IDA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008559 - xenobiotic-transporting ATPase activity [Evidence IEA] GO_process : GO:0015893 - drug transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : multi-drug resistance 3; P glycoprotein 3; multiple drug resistant 1a; ATP-binding cassette, sub-family B (MDR/TAP), member 4; ecotropic viral integration site 32 product : ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein_id : NP_035206.1

name	EG330031 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82801587 GeneID:330031 MGI:3643983
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_905601.1

name	Abcb1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755046 CCDS:CCDS19085.1 GeneID:18669 MGI:97568
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008559 - xenobiotic-transporting ATPase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : P glycoprotein 1 product : ATP-binding cassette, sub-family B (MDR/TAP), member 1B protein_id : NP_035205.1

name	Abcb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679297 CCDS:CCDS19086.1 GeneID:18670 MGI:97569
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008559 - xenobiotic-transporting ATPase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : P glycoprotein 2 product : ATP-binding cassette, sub-family B (MDR/TAP), member 4 protein_id : NP_032856.1

name	Crot (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17157983 CCDS:CCDS19087.1 GeneID:74114 MGI:1921364
definition	GO_component : GO:0005777 - peroxisome [Evidence IDA] GO_function : GO:0008458 - carnitine O-octanoyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0015908 - fatty acid transport [Evidence IDA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 product : carnitine O-octanoyltransferase protein_id : NP_076222.1

name	4930420K17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486626 GeneID:652925 MGI:3606159
definition	codon_start : 1 product : hypothetical protein LOC652925 protein_id : NP_001074498.1

name	Dmtf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560526 CCDS:CCDS19088.1 GeneID:23857 MGI:1344415
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : D-interacting myb-like protein; cyclin D binding myb-like transcription factor 1D-interacting myb-like protein product : cyclin D binding myb-like transcription factor 1 protein_id : NP_035936.2

name	9330182L06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625972 CCDS:CCDS19089.1 GeneID:231014 MGI:2443264
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC231014 protein_id : NP_766294.2

name	Grm3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32469489 CCDS:CCDS19090.1 GeneID:108069 MGI:1351340
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0043197 - dendritic spine [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IDA]; GO:0048786 - presynaptic active zone [Evidence NAS]; GO:0042734 - presynaptic membrane [Evidence IDA] GO_function : GO:0005246 - calcium channel regulator activity [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0001641 - group II metabotropic glutamate receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0051930 - regulation of sensory perception of pain [Evidence NAS]; GO:0007165 - signal transduction [Evidence IEA]; GO:0035249 - synaptic transmission, glutamatergic [Evidence TAS] codon_start : 1 note : G protein-coupled receptor, family C, group 1, member C product : glutamate receptor, metabotropic 3 protein_id : NP_862898.1

name	LOC100042768 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042768
definition	number : 1 pseudo : _no_value

name	LOC625446 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625446
definition	number : 1 pseudo : _no_value

name	LOC625446 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625446
definition	number : 2 pseudo : _no_value

name	LOC625446 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625446
definition	number : 3 pseudo : _no_value

name	LOC625446 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625446
definition	number : 4 pseudo : _no_value

name	LOC625446 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625446
definition	number : 5 pseudo : _no_value

name	LOC435832 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435832
definition	number : 1 pseudo : _no_value

name	LOC435832 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435832
definition	number : 2 pseudo : _no_value

name	LOC435832 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435832
definition	number : 3 pseudo : _no_value

name	LOC100041395 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253513 GeneID:100041395
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : similar to Anapc5 protein pseudo : _no_value transcript_id : XR_032668.1

name	LOC381612 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253531 GeneID:381612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 23 ESTs, 2 Proteins product : similar to EG545728 protein pseudo : _no_value transcript_id : XR_034142.1

clone name	MSMg01-173O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-233D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-279A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425B06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-232D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451F07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-106C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428M03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-392D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172L09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-179M01.b	B6Ng01-179M01.g
ACC	GA006387	GA006388
length	1,062	972
definition	B6Ng01-179M01.b	B6Ng01-179M01.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctttgtttagctttgtattccagttttaaaaatagggttatttgg ttctctggagtgtaacatcttgagttctttgtatatgttggatattagcc ctctatctgatgtacagttgctaaagatcttttcccaatctgttggttgc cattttgtcctattgacagtgttctttgtcttacagaagctttgcaattt tatgaggtcccatttgttaattcttgatcttagagcataagccattggta ttctgttcaggaaattctcccctgtgcccatgtgctagaggctcttccct actttcttttctattagtttcagtgtctctggttttaagtggagttcctt gatccacttggacttgaactttctacaaggagataagaatggatcgattt gcattcttctacatgctaactgccagttgaaccagcactgtttttgaaaa tgctgtcttcccccccccaccccccactggatggttttagttcctttgtg atcaaatgaccataggtgagtaggttcatttctgggtccccatcattttt atgtcttcattagcaaaacactgaagaattctaatggttttgaaatgtca ttgtgctttcatgccaacatgttggtgtaccatggtctcatattctttag cagacttgagtctcccatgttggagataaaacacagtcttttatctatag taggaacaacagccagaattgttttgtttgttcagtctttacattgtgca gggggtaaagagctagaagatgcctgcacatacagcacattgtgaagagt aacccctgtcttgggttaatctgtctttataatcatgtgctttctatttg ctctcaagggggaggttctgttttgaagttgttggcctaataatcagaat ttacttttgctctggagaagatacatctctatcatccaaggattttgagt tgtattaacatatttgaaaagattatttggaatggaaagatattcattta ttttggcgtataaagcccaagaaagtaagggcatcccatattttaccggc tttctctcaact	gaattcctgatctttccaagatttttatcatgaatgggtgttggattttt tcaaatgattttgctgcgtctaaggagatgatcatgtggtttttgtattc gagtttgtttatataatggattacattgatggattttcgtatattaaacc attcctgcatccctggaataaaacctacttggtcaggatggatgattgtt ttaatgtgttcttggattcggttagcaagaattttattgagtatttttgc acctatattcataagggaaattggtctgaagttctctatctttgttggat ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg ggtagagtactttctacttctattttgtggaatagtttgtgaagaattgg aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg gtcctgggctttttttggttgtgagactattaatgactgcttctatttct ttaggggcatgggactgtttagattgttaacttgatcctgatttaacttt tgtatctggtatctgtctagaaatttgtccattttgtccagtttttccag gatctgatggtgttttggatttcttcaggatctgttgttatgtctccttt tcctttctgatttttgttaattaggatgctgttcctgtgccctgtagtga gtctggctaagggtttgtctatcttgttgactttctcaaagaaccagctc cttgtttgggtgattctttgaatagttcttcttgttttccatttggttga ttcgcccctgagtttgattatttcttggctgtctactcctcttggggtga atttggcttccctttttttttagagcttttaggtgtgctgtcaagctgcc tagtgtgtgctcttctctaggttttctttttgggaggcactcagagttat gaagttttccttctagaatggc
quality values	Open. Hide. 58 36 19 26 51 43 31 58 58 29 43 47 33 29 32 58 58 58 58 58 58 42 42 62 62 33 25 54 62 62 62 54 39 15 18 9 7 9 13 8 8 5 6 6 8 6 8 8 38 44 62 62 62 62 62 62 62 62 59 51 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 18 12 11 13 9 10 18 13 17 17 10 10 23 18 23 18 30 34 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 54 62 59 54 38 42 56 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 46 62 56 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 42 54 56 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 56 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 43 43 38 31 37 23 50 45 34 43 39 59 62 62 62 59 59 62 59 62 62 62 62 62 62 62 59 51 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 44 59 59 54 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 56 51 56 51 56 62 62 62 62 56 56 56 56 62 56 56 62 62 62 62 62 62 56 62 62 56 56 56 62 62 62 62 62 62 56 62 62 62 62 62 47 62 62 62 62 47 54 62 43 56 47 62 38 56 56 56 62 62 62 56 62 62 47 62 62 18 62 56 56 56 47 41 56 62 62 62 47 56 62 62 62 62 62 62 62 62 54 54 54 52 54 54 62 62 62 62 62 62 47 62 52 62 62 62 39 38 62 62 46 62 62 62 54 47 52 41 62 62 49 58 42 42 54 58 54 42 54 54 58 46 54 42 41 54 52 52 58 54 49 52 52 45 16 58 50 54 58 42 54 52 54 54 58 58 58 42 32 47 54 45 37 54 52 58 19 36 33 27 54 34 40 13 12 9 9 6 9 52 47 52 41 22 40 47 47 19 19 18 16 13 21 54 33 13 13 12 10 7 10 47 46 37 50 37 40 35 58 35 22 22 28 23 21 58 58 38 30 58 51 42 22 42 25 16 13 9 26 27 46 49 34 40 31 41 50 50 48 40 37 41 12 43 44 34 41 42 53 58 44 25 44 13 28 39 33 25 28 26 14 54 24 28 50 37 28 52 27 23 40 29 46 24 52 32 50 50 35 35 39 22 17 29 15 24 30 58 32 36 29 33 32 32 28 40 50 52 28 51 33 49 40 30 32 50 40 39 11 12 36 29 50 38 39 20 29 23 51 16 39 37 28 42 16 31 26 52 53 32 33 42 33 37 32 36 23 27 18 27 21 14 25 37 52 34 33 13 13 9 39 37 41 14 41 31 47 34 37 21 33 33 31 47 44 26 15 42 20 16 35 27 30 19 18 14 22 6 47 25 13 11 26 31 29 40 28 24 13 46 15 21 53 34 17 25 7 46 46 25 12 25 32 32 21 30 5 25 17 34 30 11 12 9 25 12 15 30 32 32 31 31 21 24 30 27 31 21 17 21 14 20 29 11 9 51 42 23 24 24 18 51 33 31 11 9 16 26 26 27 27 14 33 23 17 27 18 18 17 46 30 17 9 26 29 23 16 13 46 37 16 18 24 8 6 12 9 32 18 8 6 19 11 11 14 21 31 11 16 12 5 10 11 43 38 18 11 30 25 31 31 28 25 32 44 29 19 9 10 13 20 9 18 21 21 14 13 5 18 19 27 36 10 6 6 17 9 32 25 18 6 13 5 18 36 15 16 13 22 5 5 7 29 37 31 15 11 12 17 21 12 7 6 6	Open. Hide. 62 47 56 36 62 62 62 62 62 49 54 62 56 26 13 32 24 13 10 9 16 6 8 10 10 8 12 17 19 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 43 59 62 62 62 62 26 19 19 18 17 21 23 21 18 18 13 18 16 18 30 23 54 54 54 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 54 54 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 59 59 62 59 59 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 46 45 34 32 34 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 43 50 62 50 56 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 56 59 62 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 62 62 54 47 62 62 62 62 62 56 56 47 33 62 62 62 62 56 62 62 62 62 62 54 62 62 62 62 62 49 39 49 62 56 62 62 62 62 62 62 62 62 56 62 62 62 62 62 47 62 62 62 62 62 47 56 62 62 56 62 62 62 48 62 62 62 54 43 62 32 54 62 62 62 62 48 62 47 54 62 62 62 62 54 42 54 46 47 52 62 54 38 62 46 41 54 54 39 36 52 48 52 52 52 47 44 52 58 52 58 58 52 46 45 30 27 33 54 58 49 54 52 58 42 52 58 32 48 50 52 58 54 58 54 58 58 32 54 52 48 52 54 54 58 52 54 54 27 58 30 58 58 54 35 30 21 11 15 14 14 17 16 7 19 42 30 40 46 51 46 30 25 24 51 43 50 50 46 37 42 19 26 30 12 17 25 39 30 27 20 12 13 27 51 44 26 51 36 35 16 58 19 10 50 44 51 26 52 46 37 52 30 19 10 10 10 32 46 39 30 52 58 21 33 32 27 29 32 38 14 32 19 22 21 23 18 40 24 17 30 11 41 27 7 28 33 24 28 6 12 24 38 28 38 32 18 43 41 32 32 31 22 35 17 17 33 46 25 34 42 29 18 50 22 36 49 11 46 11 13 43 54 49 40 37 24 38 41 42 21 22 22 12 20 26 24 38 23 29 41 15 22 22 18 29 41 16 27 13 31 28 21 20 13 30 29 24 33 23 17 9 15 25 23 29 20 22 31 22 28 24 17 35 37 18 31 32 34 52 11 6 23 18 6 16 29 31 22 18 24 31 24 52 52 52 34 47 33 31 27 15 11 26 11 18 23 47 32 31 20 7 12 12 12 25 21 5 7 27 8 23 15 30 22 8 18 14 13 11 31 11 6 26 20 22 31 11 12 11 8 10 7 26 16 14 16 23 11 7 23 30 25 18 13 20 31 13 41 40 18 26 18 10 27 21 21 20 26 16 6 6 9 8 13 6 11 13 20 35 26 21 18 7 15 33 37 21 25 22 5 11 22 32 31 10 14 10 4 5 5 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_9473571_9474585
seq2: B6Ng01-179M01.b_89_1104

seq1  TTGGTTCTCTGGAGTGTAACATCTTGAGTTCTTTGTATATGTTGGATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCTCTGGAGTGTAACATCTTGAGTTCTTTGTATATGTTGGATATT  50

seq1  AGCCCTCTATCTGATGTACAGTTGCTAAAGATCTTTTCCCAATCTGTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCTATCTGATGTACAGTTGCTAAAGATCTTTTCCCAATCTGTTGG  100

seq1  TTGCCATTTTGTCCTATTGACAGTGTTCTTTGTCTTACAGAAGCTTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATTTTGTCCTATTGACAGTGTTCTTTGTCTTACAGAAGCTTTGCA  150

seq1  ATTTTATGAGGTCCCATTTGTTAATTCTTGATCTTAGAGCATAAGCCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGAGGTCCCATTTGTTAATTCTTGATCTTAGAGCATAAGCCATT  200

seq1  GGTATTCTGTTCAGGAAATTCTCCCCTGTGCCCATGTGCTAGAGGCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCTGTTCAGGAAATTCTCCCCTGTGCCCATGTGCTAGAGGCTCTT  250

seq1  CCCTACTTTCTTTTCTATTAGTTTCAGTGTCTCTGGTTTTAAGTGGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACTTTCTTTTCTATTAGTTTCAGTGTCTCTGGTTTTAAGTGGAGTT  300

seq1  CCTTGATCCACTTGGACTTGAACTTTCTACAAGGAGATAAGAATGGATCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATCCACTTGGACTTGAACTTTCTACAAGGAGATAAGAATGGATCG  350

seq1  ATTTGCATTCTTCTACATGCTAACTGCCAGTTGAACCAGCACTGTTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATTCTTCTACATGCTAACTGCCAGTTGAACCAGCACTGTTTTTG  400

seq1  AAAATGCTGTCTTCCCCCCCCCACCCCCCACTGGATGGTTTTAGTTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTGTCTTCCCCCCCCCACCCCCCACTGGATGGTTTTAGTTCCTT  450

seq1  TGTGATCAAATGACCATAGGTGAGTAGGTTCATTTCTGGGTCCCCATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCAAATGACCATAGGTGAGTAGGTTCATTTCTGGGTCCCCATCAT  500

seq1  TTTTATGTCTTCATTAGCAAAACACTGAAGAATTCTAATGGTTTTGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTCTTCATTAGCAAAACACTGAAGAATTCTAATGGTTTTGAAAT  550

seq1  GTCATTGTGCTTTCATGCCAACATGTTGGTGTACCATGGTCTCATATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTGCTTTCATGCCAACATGTTGGTGTACCATGGTCTCATATTCT  600

seq1  TTAGCAGACTTGAGTCTCCCATGTTGGAGATAAAACACAGTCTTTTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGACTTGAGTCTCCCATGTTGGAGATAAAACACAGTCTTTTATCT  650

seq1  ATAGTAGGAACAACAGCCAGAATTGTTTTTGTTTGTTCAGTCTTTACATT  700
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATAGTAGGAACAACAGCCAGAATTG-TTTTGTTTGTTCAGTCTTTACATT  699

seq1  GTGCAGGGGGTAAAGAGCTAGAAGATGCCTGCACATACAGCACATTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGGGGTAAAGAGCTAGAAGATGCCTGCACATACAGCACATTGTGA  749

seq1  AGAGTAACCCCTGTCTTGGGTTAATCTGTC-TTATAATCATGTGCTTTCT  799
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGAGTAACCCCTGTCTTGGGTTAATCTGTCTTTATAATCATGTGCTTTCT  799

seq1  ATTTGCTCTCAAGGGGGAGGTTCTGTTTTGAAGTTGTTGGCCT-ATAATC  848
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTTGCTCTCAAGGGGGAGGTTCTGTTTTGAAGTTGTTGGCCTAATAATC  849

seq1  AGAATTTACTTTTGCTCTGGAAGAAGATAACATCTCTATCATCCAAGGA-  897
      |||||||||||||||||||| ||||||| |||||||||||||||||||| 
seq2  AGAATTTACTTTTGCTCTGG-AGAAGAT-ACATCTCTATCATCCAAGGAT  897

seq1  TTTGAGTTGTATTAACATATTTGAAAAGATTATTTGGAAT-GAAAGATAA  946
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  TTTGAGTTGTATTAACATATTTGAAAAGATTATTTGGAATGGAAAGAT-A  946

seq1  TCCATATA-TTTGGCGTATAAAAGCCAAGAAAG-AAGGGCATCCCATAAT  994
      | ||| || |||||||||||||  ||||||||| |||||||||||||| |
seq2  TTCATTTATTTTGGCGTATAAAGCCCAAGAAAGTAAGGGCATCCCATATT  996

seq1  TTACTCGGCTTTCTCTCAACT  1015
      |||| ||||||||||||||||
seq2  TTAC-CGGCTTTCTCTCAACT  1016

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BAC

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Alignment Information