MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-181C19
Chromosome	5 (Build37)
Map Location	107,348,523 - 107,509,066
singlet/doublet	doublet
Overlap gene	Hfm1, Cdc7
Upstream gene	LOC626723, LOC546882, LOC671295, 4930458A03Rik, Barhl2, EG666892, LOC100042389, Zfp644, LOC100042400, EG666922
Downstream gene	Tgfbr3, LOC666518, Brdt, LOC666535, Abhd7, 4921521K07Rik, LOC72342, 1700028K03Rik, Glmn, AW060207, Gfi1, LOC100042473, Evi5, 1700013N18Rik, Rpl5, 2900024C23Rik, LOC675566, Mtf2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC626723 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626723
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins pseudo : _no_value

name	LOC546882 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546882
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 17 Proteins pseudo : _no_value

name	LOC671295 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671295
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	4930458A03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330146 MGI:2685681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Barhl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104382 MGI:1859314
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666892 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666892 MGI:3646046
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042389 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Zfp644 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52397 MGI:1277212
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042400 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	EG666922 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666922 MGI:3647827
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 Proteins pseudo : _no_value

name	Hfm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330149 MGI:3036246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Cdc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12545 MGI:1309511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tgfbr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21814 MGI:104637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666518 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Brdt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114642 MGI:1891374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC666535 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Abhd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384214 MGI:2686228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921521K07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70902 MGI:1918152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC72342 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:72342
definition	note : LSM12 homolog (S. cerevisiae) pseudogene pseudo : _no_value

name	1700028K03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76421 MGI:1923671
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glmn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170823 MGI:2141180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AW060207 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231571 MGI:2141142
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gfi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14581 MGI:103170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042473 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042473
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Evi5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14020 MGI:104736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700013N18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73318 MGI:1920568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Rpl5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19983 MGI:102854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2900024C23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67266 MGI:1914516
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675566 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675566
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 6 Proteins pseudo : _no_value

name	Mtf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17765 MGI:105050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930458A03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375062 GeneID:330146 MGI:2685681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 4930458A03 gene transcript_id : XM_287481.4

name	Barhl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56699435 GeneID:104382 MGI:1859314
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BarH-like 2 (Drosophila) transcript_id : NM_001005477.1

name	EG666892 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375063 GeneID:666892 MGI:3646046
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG666892 transcript_id : XM_986833.1

name	LOC100042389 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254148 GeneID:100042389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100042389 transcript_id : XM_001478574.1

name	Zfp644 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51988895 GeneID:52397 MGI:1277212
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 644 transcript_id : NM_026856.2

name	LOC100042400 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254150 GeneID:100042400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042400 transcript_id : XM_001478595.1

name	Hfm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254112 GeneID:330149 MGI:3036246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) transcript_id : XM_987051.2

name	Cdc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126032302 GeneID:12545 MGI:1309511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle 7 (S. cerevisiae) transcript_id : NM_009863.2

name	Tgfbr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271510 GeneID:21814 MGI:104637
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming growth factor, beta receptor III transcript_id : NM_011578.2

name	Brdt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120431735 GeneID:114642 MGI:1891374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain, testis-specific transcript_id : NM_054054.2

name	Brdt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120431732 GeneID:114642 MGI:1891374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain, testis-specific transcript_id : NM_001079873.1

name	Abhd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134948535 GeneID:384214 MGI:2686228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abhydrolase domain containing 7 transcript_id : NM_001001804.2

name	4921521K07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802365 GeneID:70902 MGI:1918152
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921521K07 gene transcript_id : NM_027599.2

name	1700028K03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33286439 GeneID:76421 MGI:1923671
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700028K03 gene transcript_id : NM_182745.1

name	Glmn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18875423 GeneID:170823 MGI:2141180
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glomulin, FKBP associated protein transcript_id : NM_133248.1

name	AW060207 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450300 GeneID:231571 MGI:2141142
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW060207 transcript_id : NM_144911.1

name	Gfi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778929 GeneID:14581 MGI:103170
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth factor independent 1 transcript_id : NM_010278.2

name	LOC100042473 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254152 GeneID:100042473
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042473 transcript_id : XM_001478783.1

name	Evi5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185904 GeneID:14020 MGI:104736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ecotropic viral integration site 5 transcript_id : NM_007964.2

name	Rpl5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956081 GeneID:19983 MGI:102854
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L5 transcript_id : NM_016980.1

name	2900024C23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352628 GeneID:67266 MGI:1914516
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2900024C23 gene transcript_id : NM_026062.3

name	Mtf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70887768 GeneID:17765 MGI:105050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : metal response element binding transcription factor 2 transcript_id : NM_013827.2

name	4930458A03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28519035 GeneID:330146 MGI:2685681
definition	codon_start : 1 product : hypothetical protein protein_id : XP_287481.1

name	Barhl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56699436 CCDS:CCDS19497.1 GeneID:104382 MGI:1859314
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0045165 - cell fate commitment [Evidence IDA]; GO:0001709 - cell fate determination [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IDA] [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0045727 - positive regulation of protein biosynthesis [Evidence IMP]; GO:0030516 - regulation of axon extension [Evidence IMP] codon_start : 1 note : BarH-like 2 homeobox protein; BarH-class homeodomain transcription factor product : BarH-like 2 protein_id : NP_001005477.1

name	EG666892 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375064 GeneID:666892 MGI:3646046
definition	codon_start : 1 product : hypothetical protein protein_id : XP_991927.1

name	LOC100042389 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254149 GeneID:100042389
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478624.1

name	Zfp644 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51988896 GeneID:52397 MGI:1277212
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger motif enhancer binding protein 2 protein_id : NP_081132.2

name	LOC100042400 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254151 GeneID:100042400
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478645.1

name	Hfm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254113 GeneID:330149 MGI:3036246
definition	codon_start : 1 product : HFM1 protein protein_id : XP_992145.2

name	Cdc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126032303 CCDS:CCDS19498.1 GeneID:12545 MGI:1309511
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : cell division cycle 7-like 1 product : cell division cycle 7 protein_id : NP_033993.2

name	Tgfbr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47271511 CCDS:CCDS19499.1 GeneID:21814 MGI:104637
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : betaglycan product : transforming growth factor, beta receptor III protein_id : NP_035708.2

name	Brdt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120431736 CCDS:CCDS19500.1 GeneID:114642 MGI:1891374
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0042393 - histone binding [Evidence IDA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0006338 - chromatin remodeling [Evidence IDA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant 1; female sterile homeotic-related gene 3; RING3-like protein product : bromodomain, testis-specific isoform A protein_id : NP_473395.2

name	Brdt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120431733 GeneID:114642 MGI:1891374
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0042393 - histone binding [Evidence IDA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0006338 - chromatin remodeling [Evidence IDA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant 2; female sterile homeotic-related gene 3; RING3-like protein product : bromodomain, testis-specific isoform B protein_id : NP_001073342.1

name	Abhd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134948536 CCDS:CCDS19501.1 GeneID:384214 MGI:2686228
definition	GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006725 - aromatic compound metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : epoxide hydrolase-related protein_id : NP_001001804.2

name	4921521K07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037223 CCDS:CCDS19502.1 GeneID:70902 MGI:1918152
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0008654 - phospholipid biosynthesis [Evidence IEA] codon_start : 1 product : hypothetical protein LOC70902 protein_id : NP_081875.1

name	1700028K03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33286440 CCDS:CCDS19504.1 GeneID:76421 MGI:1923671
definition	codon_start : 1 product : hypothetical protein LOC76421 protein_id : NP_877422.1

name	Glmn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875424 CCDS:CCDS19505.1 GeneID:170823 MGI:2141180
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence ISS] GO_function : GO:0005171 - hepatocyte growth factor receptor binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0005102 - receptor binding [Evidence ISS] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0042692 - muscle cell differentiation [Evidence ISS]; GO:0008285 - negative regulation of cell proliferation [Evidence ISS]; GO:0042130 - negative regulation of T cell proliferation [Evidence ISS]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0045086 - positive regulation of interleukin-2 biosynthesis [Evidence ISS]; GO:0042327 - positive regulation of phosphorylation [Evidence ISS]; GO:0040029 - regulation of gene expression, epigenetic [Evidence ISS]; GO:0001570 - vasculogenesis [Evidence ISS] codon_start : 1 exception : mismatches in translation note : FKBP-associated protein product : glomulin, FKBP associated protein protein_id : NP_573511.1

name	AW060207 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450301 CCDS:CCDS19506.1 GeneID:231571 MGI:2141142
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC231571 protein_id : NP_659160.1

name	Gfi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753974 GeneID:14581 MGI:103170
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042491 - auditory receptor cell differentiation [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007638 - mechanosensory behavior [Evidence IMP]; GO:0009996 - negative regulation of cell fate specification [Evidence IMP]; GO:0042660 - positive regulation of cell fate specification [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : growth factor independent 1 protein_id : NP_034408.1

name	LOC100042473 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254153 GeneID:100042473
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478833.1

name	Evi5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185905 GeneID:14020 MGI:104736
definition	codon_start : 1 product : ecotropic viral integration site 5 protein_id : NP_031990.2

name	Rpl5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956082 GeneID:19983 MGI:102854
definition	GO_component : GO:0005830 - cytosolic ribosome (sensu Eukaryota) [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 product : ribosomal protein L5 protein_id : NP_058676.1

name	2900024C23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313032 GeneID:67266 MGI:1914516
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC67266 protein_id : NP_080338.1

name	Mtf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70887769 GeneID:17765 MGI:105050
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : metal response element DNA-binding protein M96 product : metal response element binding transcription factor 2 protein_id : NP_038855.2

name	LOC671295 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671295
definition	number : 1 pseudo : _no_value

name	LOC671295 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671295
definition	number : 2 pseudo : _no_value

name	EG666922 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666922
definition	number : 2 pseudo : _no_value

name	EG666922 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666922
definition	number : 1 pseudo : _no_value

name	LOC666518 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666518
definition	number : 1 pseudo : _no_value

name	LOC666535 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666535
definition	number : 1 pseudo : _no_value

name	LOC626723 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254101 GeneID:626723
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins product : similar to ribosomal protein L15 pseudo : _no_value transcript_id : XR_032604.1

name	LOC546882 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254102 GeneID:546882
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 17 Proteins product : similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M) pseudo : _no_value transcript_id : XR_032614.1

name	1700013N18Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149253971 GeneID:73318 MGI:1920568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700013N18 gene pseudo : _no_value transcript_id : XR_035129.1

name	LOC675566 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254154 GeneID:675566
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 6 Proteins product : similar to ribosomal protein S19 pseudo : _no_value transcript_id : XR_033890.1

clone name	MSMg01-146F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-544E22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-099K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058E21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-181C19.b	B6Ng01-181C19.g
ACC	GA007409	GA007410
length	1,099	252
definition	B6Ng01-181C19.b	B6Ng01-181C19.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(107,348,523 - 107,349,618)	(107,508,815 - 107,509,066)
sequence	gaattccagactccagaggagaagcaggttttcagcctgagtcatattac tggtataaacactttctggacagtaagccactattatagttaatggtggg gaacttcctgaaggctaagttcttagactctagtcagaggcaaatcctgc aggcagacctttgtaagtatagtgcctctttttgcacaggaactatttca gaaaaatctaagaagataatgagttacaggctgacatctagctctattac tcagtctcctcacaaaattaaattatccttatgtgtttttttcctacagg taccatctcctaaccaacaaaacccaagcagaacaatattttctacttac tacatacagacatacattgggtcttcccaaatctcccttacaataattct taaatgaatcatttctttacatttctactgttcttgttctaaccaaagct tcttttcaatcagtctaggtccctgcccaagatatgatgctgccctcctt cagagtgagtcttcctatctcaactaagccttatgaaaatcccttgaagg catcctcatagaccaatctaatctagacaatccctctctcggtttccttt ctcaggctattcaaaactgtgtcaacctaacaaaacaaatcagtccaatg actacataggcccatgtgttaaaggcttgctttggttaggagaatgtgaa acttttataggtaaaagtcccaggtgtaagtttgctcactaaggtgtgga tctgaagaaatactgagactggcctctccctgtcccttcgtgttcctcct gtcacaggtgacgtttactctattctatcatccccccaggacacactatc cttccacagtcctaaagcaacaggtcaagagagcacagcttccagctgtg ggccaaatacctctttcagttttaaaaattattacctaagatctttctaa cagtaatggatgatgaataacacaacagtaagtagagaatacattctgta cctcttctttctgttcaaaggtatttcctttattttgcttggaactttgt cctgcctcactcctcatacccacaattatggatgttctactatccattc	aaaggagaagctaaaccacaagcaatgcatcatccaattaagcaaaggcg tggctttttttctgaagcgtgcttctgggtgtgtgatttttatatctaca taggtatataatggtttatgatactttccaaacaattatggacctcatgg acccttggtccagacttatccatctactgttgaattagatattcctaaat cctgcttctcagtgtgtgggaaaagaaagataagggggtggggtggggtg ga
quality values	Open. Hide. 58 33 23 34 58 58 26 18 62 54 49 62 62 38 31 62 49 62 62 47 47 54 62 62 56 62 62 62 62 62 62 62 59 43 59 59 62 59 62 35 29 59 51 51 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 59 62 62 62 62 62 62 54 62 59 59 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 46 46 58 58 58 58 58 54 58 54 54 58 54 58 58 58 58 58 58 54 58 58 45 41 58 58 58 58 58 58 58 58 54 58 54 58 54 49 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 49 48 58 58 58 58 54 58 52 52 42 58 50 51 52 46 58 51 40 47 58 58 48 58 58 53 58 54 51 53 58 47 58 58 51 58 51 51 58 58 49 50 51 58 58 58 54 51 47 52 53 39 37 58 52 58 49 48 51 50 46 28 54 54 46 58 52 58 48 52 53 54 51 54 52 41 50 58 50 51 58 39 58 40 58 33 58 58 40 49 39 41 41 41 41 53 58 33 58 37 31 58 31 51 41 58 50 40 50 58 49 44 52 50 50 50 58 35 49 49 49 54 35 40 37 49 44 35 26 54 37 54 37 37 39 37 42 54 53 47 35 49 39 31 40 40 53 45 37 51 32 53 53 54 52 35 30 45 51 45 52 47 29 53 54 45 42 42 42 54 49 37 25 54 25 42 51 46 31 46 31 41 35 31 54 40 40 51 33 28 54 40 32 35 37 28 25 47 35 40 29 43 37 24 53 31 51 32 40 30 31 32 30 53 33 37 35 18 32 51 49 34 29 30 35 34 31 35 28 29 32 33 32 31 35 32 43 30 41 33 36 41 25 26 31 34 37 21 29 33 30 30 31 31 30 24 34 31 32 14 32 25 30 30 22 28 31 36 36 31 51 37 31 31 28 33 33 14 31 29 16 31 31 30 31 42 27 31 29 29 30 31 31 31 31 42 31 29 31 31 23 31 38 36 31 34 46 31 21 27 24 42 33 31 31 31 27 32 31 31 47 37 32 31 26 30 46 46 29 17 46 46 46 33 27 21 31 23 27 31 21 18 30 29 29 12 25 20 32 25 46 25 24 22 25 13 21 25 32 33 37 27 32 26 25 10 13 33 29 10 31 33 29 22 9 31 17 16 13 5 19 10 26 27 24 24 30 25 30 27 24 42 19 27 36 18 21 27 21 32 25 32 27 32 11 19 32 24 24 26 24 30 21 21 48 20 16 19 16 5 10 20 30 31 14 15 32 11 21 20 43 27 18 18 32 48 18 24 32 43 43 21 24 16 16 13 10 6 9 13 8 11 30 17 7 4 9 21 20 21 18 14 22 7 3 4 8 5 5 3 3 5 17 14 10 29 4 7 6 6 5 3 4 5 13 19 15 12 14 19 7 11 11 15 26 15 10 8 23 6 11 8 11 19 10	Open. Hide. 59 62 62 62 62 62 56 62 62 56 59 62 48 49 54 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_107348523_107349618
seq2: B6Ng01-181C19.b_43_1141

seq1  GAATTCCAGACTCCAGAGGAGAAGCAGGTTTTCAGCCTGAGTCATATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACTCCAGAGGAGAAGCAGGTTTTCAGCCTGAGTCATATTAC  50

seq1  TGGTATAAACACTTTCTGGACAGTAAGCCACTATTATAGTTAATGGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATAAACACTTTCTGGACAGTAAGCCACTATTATAGTTAATGGTGGG  100

seq1  GAACTTCCTGAAGGCTAAGTTCTTAGACTCTAGTCAGAGGCAAATCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCCTGAAGGCTAAGTTCTTAGACTCTAGTCAGAGGCAAATCCTGC  150

seq1  AGGCAGACCTTTGTAAGTATAGTGCCTCTTTTTGCACAGGAACTATTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACCTTTGTAAGTATAGTGCCTCTTTTTGCACAGGAACTATTTCA  200

seq1  GAAAAATCTAAGAAGATAATGAGTTACAGGCTGACATCTAGCTCTATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCTAAGAAGATAATGAGTTACAGGCTGACATCTAGCTCTATTAC  250

seq1  TCAGTCTCCTCACAAAATTAAATTATCCTTATGTGTTTTTTTCCTACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTCCTCACAAAATTAAATTATCCTTATGTGTTTTTTTCCTACAGG  300

seq1  TACCATCTCCTAACCAACAAAACCCAAGCAGAACAATATTTTCTACTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCTCCTAACCAACAAAACCCAAGCAGAACAATATTTTCTACTTAC  350

seq1  TACATACAGACATACATTGGGTCTTCCCAAATCTCCCTTACAATAATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACAGACATACATTGGGTCTTCCCAAATCTCCCTTACAATAATTCT  400

seq1  TAAATGAATCATTTCTTTACATTTCTACTGTTCTTGTTCTAACCAAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAATCATTTCTTTACATTTCTACTGTTCTTGTTCTAACCAAAGCT  450

seq1  TCTTTTCAATCAGTCTAGGTCCCTGCCCAAGATATGATGCTGCCCTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCAATCAGTCTAGGTCCCTGCCCAAGATATGATGCTGCCCTCCTT  500

seq1  CAGAGTGAGTCTTCCTATCTCAACTAAGCCTTATGAAAATCCCTTGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGAGTCTTCCTATCTCAACTAAGCCTTATGAAAATCCCTTGAAGG  550

seq1  CATCCTCATAGACCAATCTAATCTAGACAATCCCTCTCTCGGTTTCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCATAGACCAATCTAATCTAGACAATCCCTCTCTCGGTTTCCTTT  600

seq1  CTCAGGCTATTCAAAACTGTGTCAACCTAACAAAACAAATCAGTCCAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTATTCAAAACTGTGTCAACCTAACAAAACAAATCAGTCCAATG  650

seq1  ACTACATAGGCCCATGTGTTAAAGGCTTGCTTTGGTTAGGAGAATGTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATAGGCCCATGTGTTAAAGGCTTGCTTTGGTTAGGAGAATGTGAA  700

seq1  ACTTTTATAGGTAAAAGTCCCAGGTGTAAGTTTGCTCACTAAGGTGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATAGGTAAAAGTCCCAGGTGTAAGTTTGCTCACTAAGGTGTGGA  750

seq1  TCTGAAGAAATACTGAGACTGGCCTCTCCCTGTCCCTTCGTGTTCCTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGAAATACTGAGACTGGCCTCTCCCTGTCCCTTCGTGTTCCTCCT  800

seq1  GTCACAGGTGACGTTTACTCTATTCTATCATCCCCCCAGGACACACTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGGTGACGTTTACTCTATTCTATCATCCCCCCAGGACACACTATC  850

seq1  CTTCCACAGTCCTAAAGCAACAGGTCAAGAGAGCACAGCTTCCAGCTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACAGTCCTAAAGCAACAGGTCAAGAGAGCACAGCTTCCAGCTGTG  900

seq1  GGCCAAATACCTCTTTCAGTTTTAAAAATTATTACCTAAGATCTTTCTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAATACCTCTTTCAGTTTTAAAAATTATTACCTAAGATCTTTCTAA  950

seq1  CAGTAATGGATGATGAATAACACAACAGTAAGTAGAGAATACATTCTGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATGGATGATGAATAACACAACAGTAAGTAGAGAATACATTCTGTA  1000

seq1  CCTCTTCTTTCTGTTCAAAGGTATTTCCTTTATTTTGCTTGGAACTTTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTTTCTGTTCAAAGGTATTTCCTTTATTTTGCTTGGAACTTTGT  1050

seq1  CCTGCCTCACT-CTCATACCCACA--TATGGATGTTCTACTATTCATTC  1096
      ||||||||||| ||||||||||||  ||||||||||||||||| |||||
seq2  CCTGCCTCACTCCTCATACCCACAATTATGGATGTTCTACTATCCATTC  1099

seq1: chr5_107508815_107509066
seq2: B6Ng01-181C19.g_66_317 (reverse)

seq1  TCCACCCCACCCCACCCCCTTATCTTTCTTTTCCCACACACTGAGAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCCACCCCACCCCCTTATCTTTCTTTTCCCACACACTGAGAAGCA  50

seq1  GGATTTAGGAATATCTAATTCAACAGTAGATGGATAAGTCTGGACCAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTAGGAATATCTAATTCAACAGTAGATGGATAAGTCTGGACCAAGG  100

seq1  GTCCATGAGGTCCATAATTGTTTGGAAAGTATCATAAACCATTATATACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGAGGTCCATAATTGTTTGGAAAGTATCATAAACCATTATATACC  150

seq1  TATGTAGATATAAAAATCACACACCCAGAAGCACGCTTCAGAAAAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGATATAAAAATCACACACCCAGAAGCACGCTTCAGAAAAAAAGC  200

seq1  CACGCCTTTGCTTAATTGGATGATGCATTGCTTGTGGTTTAGCTTCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCTTTGCTTAATTGGATGATGCATTGCTTGTGGTTTAGCTTCTCCT  250

seq1  TT  252
      ||
seq2  TT  252

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information