BAC Information

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BAC

Clone NameB6Ng01-182E07
Chromosome5 (Build37)
Map Location 95,138,707 - 95,139,841
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421, AA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507, LOC621203
Downstream geneLOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049, EG666159, LOC666164, EG666169, D5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182E07.bB6Ng01-182E07.g
ACCGA008208GA008209
length1,2301,142
definitionB6Ng01-182E07.b B6Ng01-182E07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagaggagactttaaaagccataatggactggggagatgtctt
acagtctctaagagatcacaggtaccaacccagactattatacccagcaa
aactttcaatcattatggacagagaagacaagatactccattacaaaacc
caatttaaacaatacgttctacttatcctgcaagctagtcttccactagc
agccttcatataaagatgtaaaattctcagctctgtctggatgctaccat
gctcctgccttgatgacaatggtttgaacttctgaatctctataccaacc
tcaaccaaaactttgccaggggcagatggtttttagtgcataattttacc
agactttccaagaacagataatatcattacttgtgtgctctttccccagc
cttgagcaggataaacagatcttgagtgcttgccacaatgggttttacaa
cctaggtggacttgtctgcacctgcaatttcctacaggaacttagaggaa
tagactgccttctgtgctttctttgcaacatattccagctgaaacaaaga
atgaggtctgtgggctttccctgtataaacaaaatgctgaatattaaact
tggagccttgatcagaaactttatcttcgcttcatccttctcttgcattc
catccattatcatttccaggcaacccagttcttccatggctactggacaa
ctacaaatacccctcatgctattccacaatggagaaacagaatgaatatt
gccaaacctaatctatgaaggaagagtcaccttgataactaaacaacaca
aagcctcaacaaacaaagaaaatttcagacacctttcccttatgaacact
gatgcaaaaatactcgatatgatattagcaaacagaacccaagaagacat
caaagtcacaatccactatgataaagtaggcttcataccaaggaagcagg
ttgggttaaaatacaaaaatgcagccaggcatggtgcacacaccttttaa
tcttagcactggggaggcagaggcaggcattttctgtggtcgaggcacct
ggtctacagagtggagttccagggctacacagagaaacactgtctgacgc
cacccccccaccctcaaaaatatcatcatgtatctaccatataaaacaac
ccaaggaaaaatactgctatggagactggacaactcaacattatttggaa
gacctgggagagaatcatggcatacacagc
gaattccatgccagggatagagcacagtagattctgcggtttggggagga
atggtttcagcatgatgctaggagcactgcccaggtgcctttcatcttct
gttccatgctcaaaaagagtagaagaatggagagcctggcaggttttgtt
gtttgcttgtctgtttgtttggttttgtgacttctgtctttagttaaagg
ttttctctggacttggctgaggctgagatcctgctaataagccctattct
ctggccttgaaacttttagccccttgctggtctgtgtcttgagattacaa
gctccccagatgaatcatttttaataatgaaagctactatttgtaagtgg
ccatttgatctttttctggttgcttgctgccctctaccacctatgcaggt
gtagtagctgactcacagttgtacccttagtatttagccattcacatctt
cctagcccacacagtttctttctatttttaaccctgagcctccacagtaa
aatcttggaatgaacaattttgagcatcagagcaaaaccagctttttgcc
caagccagaagcagcaattttcttccctgcttggcagttgccctcaaaag
gcaggggccagagactacagacttggaatccaaagaaactgttgagcgtg
gcttttccatttgattttctctagaaattgggctttcataggacactggc
cacatctagggtgggtcatcaaccattgcaaatctagaatctctctacca
gatgtgcctagagagtaaaatcaggggtcacttcagtattactactttcc
agggaggcagcatcaaccacagcagatccctgtgacagtacagaacaaag
atcagtttgccttcagtccagggcacatcttggaagtttttgtcatcaac
aagtttgggaacaactgtattttagactagggctcaaccataaggagcca
ctgggccttctctatattggcttcctcttctcttgctataagggtgctag
acttctcactttcagaggtctaaattgtactatcctccactaattagtca
gaatatggaagatcttttcctaatttgaaccccagaatcccatttccagg
ctgcctaaggtgaacagtttccatctcattaagccaggttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_95138707_95139841
seq2: B6Ng01-182E07.g_64_1205

seq1  GAATTCCATGCCAGGGATAGAGCACAGTAGATTCTGCGGTTTGGGGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCCAGGGATAGAGCACAGTAGATTCTGCGGTTTGGGGAGGA  50

seq1  ATGGTTTCAGCATGATGCTAGGAGCACTGCCCAGGTGCCTTTCATCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCAGCATGATGCTAGGAGCACTGCCCAGGTGCCTTTCATCTTCT  100

seq1  GTTCCATGCTCAAAAAGAGTAGAAGAATGGAGAGCCTGGCAGGTTTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATGCTCAAAAAGAGTAGAAGAATGGAGAGCCTGGCAGGTTTTGTT  150

seq1  GTTTGCTTGTCTGTTTGTTTGGTTTTGTGACTTCTGTCTTTAGTTAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTGTCTGTTTGTTTGGTTTTGTGACTTCTGTCTTTAGTTAAAGG  200

seq1  TTTTCTCTGGACTTGGCTGAGGCTGAGATCCTGCTAATAAGCCCTATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGGACTTGGCTGAGGCTGAGATCCTGCTAATAAGCCCTATTCT  250

seq1  CTGGCCTTGAAACTTTTAGCCCCTTGCTGGTCTGTGTCTTGAGATTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTGAAACTTTTAGCCCCTTGCTGGTCTGTGTCTTGAGATTACAA  300

seq1  GCTCCCCAGATGAATCATTTTTAATAATGAAAGCTACTATTTGTAAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCAGATGAATCATTTTTAATAATGAAAGCTACTATTTGTAAGTGG  350

seq1  CCATTTGATCTTTTTCTGGTTGCTTGCTGCCCTCTACCACCTATGCAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGATCTTTTTCTGGTTGCTTGCTGCCCTCTACCACCTATGCAGGT  400

seq1  GTAGTAGCTGACTCACAGTTGTACCCTTAGTATTTAGCCATTCACATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGCTGACTCACAGTTGTACCCTTAGTATTTAGCCATTCACATCTT  450

seq1  CCTAGCCCACACAGTTTCTTTCTATTTTTAACCCTGAGCCTCCACAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCCACACAGTTTCTTTCTATTTTTAACCCTGAGCCTCCACAGTAA  500

seq1  AATCTTGGAATGAACAATTTTGAGCATCAGAGCAAAACCAGCTTTTTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGGAATGAACAATTTTGAGCATCAGAGCAAAACCAGCTTTTTGCC  550

seq1  CAAGCCAGAAGCAGCAATTTTCTTCCCTGCTTGGCAGTTGCCCTCAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGAAGCAGCAATTTTCTTCCCTGCTTGGCAGTTGCCCTCAAAAG  600

seq1  GCAGGGGCCAGAGACTACAGACTTGGAATCCAAAGAAACTGTTGAGCGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGCCAGAGACTACAGACTTGGAATCCAAAGAAACTGTTGAGCGTG  650

seq1  GCTTTTCCATTTGATTTTCTCTAGAAATTGGGCTTTCATAGGACACTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCCATTTGATTTTCTCTAGAAATTGGGCTTTCATAGGACACTGGC  700

seq1  CACATCTAGGGTGGGTCATCAACCATTGCAAATCTAGAATCTCTCTACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTAGGGTGGGTCATCAACCATTGCAAATCTAGAATCTCTCTACCA  750

seq1  GATGTGCCTAGAGAGTAAAATCAGGGGTCACTTCAGTATTACTAC-TTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GATGTGCCTAGAGAGTAAAATCAGGGGTCACTTCAGTATTACTACTTTCC  800

seq1  AGGGAGGCAGCATCAACCACAGCAGATCCCTGTGACAGTACAGAACAAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGCAGCATCAACCACAGCAGATCCCTGTGACAGTACAGAACAAAG  850

seq1  ATCAG-TTGCCTTCAGTCCAGGGCACATCTTGGAAAGTTTTGTCATCAAC  898
      ||||| |||||||||||||||||||||||||||||  |||||||||||||
seq2  ATCAGTTTGCCTTCAGTCCAGGGCACATCTTGGAAGTTTTTGTCATCAAC  900

seq1  AAGTTTGGGAACAAACTGTATTTAAGACTAGGGCTC-ACCATAAGGAGCC  947
      |||||||||||| |||||||||| |||||||||||| |||||||||||||
seq2  AAGTTTGGGAAC-AACTGTATTTTAGACTAGGGCTCAACCATAAGGAGCC  949

seq1  ACT-GGCCTTCTCTATATT-GCTTCCTC-TCTCTTGCTAT-AGGGTGCTA  993
      ||| ||||||||||||||| |||||||| ||||||||||| |||||||||
seq2  ACTGGGCCTTCTCTATATTGGCTTCCTCTTCTCTTGCTATAAGGGTGCTA  999

seq1  GAACTCTCAACTTCAGAGGTTCTTAAATTGTACTATC--TCACTAATTAA  1041
      ||  |||||  |||||||||   ||||||||||||||   |||||||| |
seq2  GACTTCTCACTTTCAGAGGT--CTAAATTGTACTATCCTCCACTAATT-A  1046

seq1  GTCAGGATATTG-AGATCTTTTCCTATATTGAACCCCAG-ATCCCATTTT  1089
      ||||| |||| | |||||||||||||  ||||||||||| ||||||||| 
seq2  GTCAGAATATGGAAGATCTTTTCCTAATTTGAACCCCAGAATCCCATTT-  1095

seq1  CCAAGGCTGCCT-AGGTGAAACAGTTTCCATCT--ATAACCCAGGTTAC  1135
       | ||||||||| ||||| ||||||||||||||   ||| |||||||||
seq2  -CCAGGCTGCCTAAGGTG-AACAGTTTCCATCTCATTAAGCCAGGTTAC  1142