BAC Information

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BAC

Clone NameB6Ng01-182J24
Chromosome5 (Build37)
Map Location 128,662,130 - 128,794,115
singlet/doubletdoublet
Overlap geneTmem132d
Upstream geneTmem132c, Slc15a4, Glt1d1
Downstream geneFzd10, LOC100040398, Piwil1, Rimbp2, Stx2, Ran, LOC100040441, Gpr133, LOC100039355
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182J24.bB6Ng01-182J24.g
ACCGA008465GA008466
length721812
definitionB6Ng01-182J24.b B6Ng01-182J24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,793,402 - 128,794,115)(128,662,130 - 128,662,934)
sequence
gaattctgggagaatatctaatagtcctgaaaaccattacccctgcaatt
agcttggtttgctcagcacacaaatgtgtatgtgtagctgagaatcgcgc
cactttgccttgtgtcatagaaaacaggaaatgcacatttcagtttcctc
ttgatggatggatggtgagtgtcccagtattcacccgctgtcatgtaatt
gtgtgtgagtatgcatgtcttttctcaattaacttgtcactgtgccagta
attttcaaggaaaaaggaaaatcgctttcaattatcctaaattgtttaaa
taaatatgcctgctgatctatggaagcgaggtgactgtggtctggagtgt
tattaccagaacttccgtaagatctgcagagactggggagtccaataatt
taaaacaatttctaattgactaaattgttataaatttagggggaaatgtt
cttctgattccttctagctcttcaggtgacttggtacctcaatgtctctg
ctttctgaaccttttttttttttttttatgttgcagtccctttacacact
gtttggacaaagacttttgaatgtggtaccttctagatgtgagtctagga
tgcttggatgtaactcccaggcatgggtcagagggatggtgggagggcat
tacactttgtgttctgggagctcaccgatttgacagacattgctgagtct
atcctgggttttgcagagaag
gaattcacttcatctataacagtaatagtagtggctgttactcttctctt
cttgcaagagatatggactaagaacccgccccacagctcctacagcactc
atgctgatgcaggggatggactaagtactaggtgacaaagaaaataaaga
ggacagcagattgaaggagggacttgaaggtgtgcagtggacttagacag
aagaagacctcagggggtctcatgctgcctgcacacattagtcactgcat
atttgcacaacagggccacaggacaaaaggtcaccagctctcaaaggtca
cagacaacgcccacgctgcagcacatgtgtgaagatcagaggacaatgtg
cggtagttggttctcacctaatagtatgccctagggatcgaacccgggtc
cacaggtttcacagcaagtgcctttacccgctgagcccctcacgaagccc
agccctactctgactctcattccctgaggcagactgtgtttctagttgat
tatgaacatgaattttaataacttctctcttgtctctattgatttttttc
cacttagtaacgaagtttgatgcagatcagctgactttaaagggactcct
ctttgcaagtacactctcttctattgttctgatcttaagtgacctccaga
ggcccatgtgttaaagcttcattgctgtcctagtttctcttttactgctg
ttcaacaaacaataacgagcaacacagaggtggaaagggtttaaattcca
agctactgtccgatgttagtgggtgaagtccaggtcaggaatctccaagc
agcccggtcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_128793402_128794115
seq2: B6Ng01-182J24.b_41_761 (reverse)

seq1  CTTCTCTGCAAA--CCA-GATAGACTCAGC-ATTTCTGTCAGATCGGTGA  46
      ||||||||||||  ||| |||||||||||| || ||||||| ||||||||
seq2  CTTCTCTGCAAAACCCAGGATAGACTCAGCAATGTCTGTCAAATCGGTGA  50

seq1  GCT-CCAGAACAC-AAGTGTAATGCCCTCCCACCATCCCTCTGACCCATG  94
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGAACACAAAGTGTAATGCCCTCCCACCATCCCTCTGACCCATG  100

seq1  CCTGGGAGTTACATCCAAGCATCCTAGACTCACATCTAGAAGGTACCACA  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGTTACATCCAAGCATCCTAGACTCACATCTAGAAGGTACCACA  150

seq1  TTCAAAAGTCTTTGTCCAAACAGTGTGT-AAGGGACTGCAACATAAAAAA  193
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCAAAAGTCTTTGTCCAAACAGTGTGTAAAGGGACTGCAACATAAAAAA  200

seq1  AAAAAAAAAAGGTTCAGAAAGCAGAGACATTGAGGTACCAAGTCACCTGA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGGTTCAGAAAGCAGAGACATTGAGGTACCAAGTCACCTGA  250

seq1  AGAGCTAGAAGGAATCAGAAGAACATTTCCCCCTAAATTTATAACAATTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAGAAGGAATCAGAAGAACATTTCCCCCTAAATTTATAACAATTT  300

seq1  AGTCAATTAGAAATTGTTTTAAATTATTGGACTCCCCAGTCTCTGCAGAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATTAGAAATTGTTTTAAATTATTGGACTCCCCAGTCTCTGCAGAT  350

seq1  CTTACGGAAGTTCTGGTAATAACACTCCAGACCACAGTCACCTCGCTTCC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGGAAGTTCTGGTAATAACACTCCAGACCACAGTCACCTCGCTTCC  400

seq1  ATAGATCAGCAGGCATATTTATTTAAACAATTTAGGATAATTGAAAGCGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCAGCAGGCATATTTATTTAAACAATTTAGGATAATTGAAAGCGA  450

seq1  TTTTCCTTTTTCCTTGAAAATTACTGGCACAGTGACAAGTTAATTGAGAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTTTCCTTGAAAATTACTGGCACAGTGACAAGTTAATTGAGAA  500

seq1  AAGACATGCATACTCACACACAATTACATGACAGCGGGTGAATACTGGGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGCATACTCACACACAATTACATGACAGCGGGTGAATACTGGGA  550

seq1  CACTCACCATCCATCCATCAAGAGGAAACTGAAATGTGCATTTCCTGTTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACCATCCATCCATCAAGAGGAAACTGAAATGTGCATTTCCTGTTT  600

seq1  TCTATGACACAAGGCAAAGTGGCGCGATTCTCAGCTACACATACACATTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGACACAAGGCAAAGTGGCGCGATTCTCAGCTACACATACACATTT  650

seq1  GTGTGCTGAGCAAACCAAGCTAATTGCAGGGGTAATGGTTTTCAGGACTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTGAGCAAACCAAGCTAATTGCAGGGGTAATGGTTTTCAGGACTA  700

seq1  TTAGATATTCTCCCAGAATTC  714
      |||||||||||||||||||||
seq2  TTAGATATTCTCCCAGAATTC  721

seq1: chr5_128662130_128662934
seq2: B6Ng01-182J24.g_64_875

seq1  GAATTCACTTCATCTATAACAGTAATAGTAGTGGCTGTTACTCTTCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCATCTATAACAGTAATAGTAGTGGCTGTTACTCTTCTCTT  50

seq1  CTTGCAAGAGATATGGACTAAGAACCCGCCCCACAGCTCCTACAGCACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAGAGATATGGACTAAGAACCCGCCCCACAGCTCCTACAGCACTC  100

seq1  ATGCTGATGCAGGGGATGGACTAAGTACTAGGTGACAAAGAAAATAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGATGCAGGGGATGGACTAAGTACTAGGTGACAAAGAAAATAAAGA  150

seq1  GGACAGCAGATTGAAGGAGGGACTTGAAGGTGTGCAGTGGACTTAGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCAGATTGAAGGAGGGACTTGAAGGTGTGCAGTGGACTTAGACAG  200

seq1  AAGAAGACCTCAGGGGGTCTCATGCTGCCTGCACACATTAGTCACTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACCTCAGGGGGTCTCATGCTGCCTGCACACATTAGTCACTGCAT  250

seq1  ATTTGCACAACAGGGCCACAGGACAAAAGGTCACCAGCTCTCAAAGGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCACAACAGGGCCACAGGACAAAAGGTCACCAGCTCTCAAAGGTCA  300

seq1  CAGACAACGCCCACGCTGCAGCACATGTGTGAAGATCAGAGGACAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAACGCCCACGCTGCAGCACATGTGTGAAGATCAGAGGACAATGTG  350

seq1  CGGTAGTTGGTTCTCACCTAATAGTATGCCCTAGGGATCGAACCCGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAGTTGGTTCTCACCTAATAGTATGCCCTAGGGATCGAACCCGGGTC  400

seq1  CACAGGTTTCACAGCAAGTGCCTTTACCCGCTGAGCCCCTCACGAAGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTTTCACAGCAAGTGCCTTTACCCGCTGAGCCCCTCACGAAGCCC  450

seq1  AGCCCTACTCTGACTCTCATTCCCTGAGGCAGACTGTGTTTCTAGTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTACTCTGACTCTCATTCCCTGAGGCAGACTGTGTTTCTAGTTGAT  500

seq1  TATGAACATGAATTTTAATAACTTCTCTCTTGTCTCTATTGATTTTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACATGAATTTTAATAACTTCTCTCTTGTCTCTATTGATTTTTTTC  550

seq1  CACTTAGTAACGAAGTTTGATGCAGATCAGCTGAC-TTAAAGGGACTCCT  599
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CACTTAGTAACGAAGTTTGATGCAGATCAGCTGACTTTAAAGGGACTCCT  600

seq1  CTTTGCAAGTACACTCTCTTCTATTGTTCTGATCTTAAGTGACCTCCAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAAGTACACTCTCTTCTATTGTTCTGATCTTAAGTGACCTCCAGA  650

seq1  GGCCCATGTGTTAAAGCTTCATTGCTGTCCTAGTTTCTCTTTTACTGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATGTGTTAAAGCTTCATTGCTGTCCTAGTTTCTCTTTTACTGCTG  700

seq1  TTCAACAAACAATAACGAGCAACACAGAGGTGGAAAGGGTTT-AATTCCA  748
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCAACAAACAATAACGAGCAACACAGAGGTGGAAAGGGTTTAAATTCCA  750

seq1  AGCTACTGTCCGATGGTAGTGGG-GAAGTCCAGG-CAGGAA-CT-CAAGC  794
      ||||||||||||||| ||||||| |||||||||| |||||| || |||||
seq2  AGCTACTGTCCGATGTTAGTGGGTGAAGTCCAGGTCAGGAATCTCCAAGC  800

seq1  AG-CCGGTCACA  805
      || |||||||||
seq2  AGCCCGGTCACA  812