BAC Information

Click to search

BAC

Clone NameB6Ng01-183A08
Chromosome5 (Build37)
Map Location 7,267,816 - 7,268,845
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041208, EG435830, LOC100042651
Downstream gene4921511H03Rik, LOC242823, LOC667767, EG546855, Steap4, Sri, LOC433840, Adam22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183A08.bB6Ng01-183A08.g
ACCGA008757GA008758
length1,0461,107
definitionB6Ng01-183A08.b B6Ng01-183A08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttagttctgtatcccatttttaacaaggttatttggttctc
tggagtctaactttatgagttcttaatatatattggatattagccctctg
ttggatgttggatggatgaagattattccaatctgttgattgccattttg
tcctattgacagtgtcctttgccctattgaaccttttcaattttatgagg
tctcatttatcaattcttgatcttagagcataaactattggttttctgtt
caggaaaatttctcctatgctcattgaggctcttccccactttcttttct
gttacttctcagctatttttaattcatcttttgagaactctgttttgttc
tatgatccatttaaaatattaattttagtttttgaaattataatataatt
atatcatactcccctttccttccatcatactttcctgtatacccttcttt
tctctttcaaattcatggactgatttctttatgtgttgttacatacattt
gtatgtttttgtttctgtctctatctatcaatatccttttcaatatgtct
aaatagaattctcaaatgaatggagaaacccaggacacttcaaccctcca
caaagaaccaaaagcaaataaggaatgataacaacaggagaaaccatctc
ccagaggaagaatacacaaattagttatcaaaggccaaatagtcattcta
tttttaattggaatatttgtcttcttgatgtttactttgttttctttgaa
ttttgtatgttctagatgcaaattctttgttagatgaacaattgttgaag
agattttttttttttattctgtaggctgaagctttgctcaaatgctggtg
tccttagtcatacagaaaattttaagcttcatggtgtcttatttattaat
ttgttggtcttatgcatgtgtcatcatttgtccctgttcagaaagacctc
cccttgtgcatatgacttcaatcctattctctacttttcttcccaatggt
attcatagtattgggtctcatggtgaaggtcatttatcctatttgg

gaattctttgtttagctctgagccccattttttaatggggctatttgatt
ttcttgagttctttgtatatattggatattagtcccctatctgatttagg
ataggtaaagatactttcccaatatcttggtggcctttttctcttattga
cagtgtcttttgcattgcagaagctttgcaaatttatgaggtcccatatg
tcaattcttgatcttacagcacaagccactctgttctattcaggaatttt
tcccctgtgcccatatcttcgaggctttttcctactttctcctctataag
tttcagtgtctctggttttaagtggagttccttaatcaacttagatttga
ccttagtacagggagataggaatggttcaattcgcattcttctacatgat
agccaccagttgtgccaacaccgtttgttgaaaatgctttctttcttcca
ctggatggttttagctcccttgtcaaaatcaagtgaacataggtgtgtgg
gttcatttctgggtctttgattctattccattggtctacttgtctgtcgc
tataacagtaccatgctgtttttatcacaattgctctgtagtatagcttt
aggtcaggcatggtgattccaccagaggttcttttttccttgagaatagt
ttttgccatcctaggttttctgtttatttccagaggaatttgcagattgc
cctttctaattcattaaagaattgagttggaattttgatggggatttcat
tgaatctgcacattgcttttggcaagatagccatttttacttaaattgat
cctgacaattccatgagcatggggagatctttccatcttctgagatcttc
tttaaatctttcttcagagacttgaagtttttatcatacagatctttcac
ttccttagtcagagccacgccaagatattttatattatttgtgactattg
aggaagggtgttgtttccctaattttcttttctcagctctgtttatcctt
ttgtgtacaggaaaggcaattgacttgttgagttaattttatatccaagc
tactcataagctgtttatcaggtttagagttctctggtggatattttaag
ggtcacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7267816_7268845
seq2: B6Ng01-183A08.b_43_1080

seq1  TTTAGTTCTGTATCCCATTTTTAACAAGGTTATTTGGTTCTCTGGAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTCTGTATCCCATTTTTAACAAGGTTATTTGGTTCTCTGGAGTCT  50

seq1  AACTTTATGAGTTCTTAATATATATTGGATATTAGCCCTCTGTTGGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTATGAGTTCTTAATATATATTGGATATTAGCCCTCTGTTGGATGT  100

seq1  TGGATGGATGAAGATTATTCCAATCTGTTGATTGCCATTTTGTCCTATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGATGAAGATTATTCCAATCTGTTGATTGCCATTTTGTCCTATTG  150

seq1  ACAGTGTCCTTTGCCCTATTGAACCTTTTCAATTTTATGAGGTCTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTCCTTTGCCCTATTGAACCTTTTCAATTTTATGAGGTCTCATTT  200

seq1  ATCAATTCTTGATCTTAGAGCATAAACTATTGGTTTTCTGTTCAGGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTCTTGATCTTAGAGCATAAACTATTGGTTTTCTGTTCAGGAAAA  250

seq1  TTTCTCCTATGCTCATTGAGGCTCTTCCCCACTTTCTTTTCTGTTACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTATGCTCATTGAGGCTCTTCCCCACTTTCTTTTCTGTTACTTC  300

seq1  TCAGCTATTTTTAATTCATCTTTTGAGAACTCTGTTTTGTTCTATGATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTATTTTTAATTCATCTTTTGAGAACTCTGTTTTGTTCTATGATCC  350

seq1  ATTTAAAATATTAATTTTAGTTTTTGAAATTATAATATAATTATATCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATATTAATTTTAGTTTTTGAAATTATAATATAATTATATCATA  400

seq1  CTCCCCTTTCCTTCCATCATACTTTCCTGTATACCCTTCTTTTCTCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTTCCTTCCATCATACTTTCCTGTATACCCTTCTTTTCTCTTTC  450

seq1  AAATTCATGGACTGATTTCTTTATGTGTTGTTACATACATTTGTATGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATGGACTGATTTCTTTATGTGTTGTTACATACATTTGTATGTTT  500

seq1  TTGTTTCTGTCTCTATCTATCAATATCCTTTTCAATATGTCTAAATAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTGTCTCTATCTATCAATATCCTTTTCAATATGTCTAAATAGAA  550

seq1  TTCTCAAATGAATGGAGAAACCCAGGACACTTCAACCCTCCACAAAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAATGAATGGAGAAACCCAGGACACTTCAACCCTCCACAAAGAAC  600

seq1  CAAAAGCAAATAAGGAATGATAACAACAGGAGAAACCATCTCCCAGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCAAATAAGGAATGATAACAACAGGAGAAACCATCTCCCAGAGGA  650

seq1  AGAATACACAAATTAGTTATCAAAGGCCAAATAGTCATTCTATTTTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACACAAATTAGTTATCAAAGGCCAAATAGTCATTCTATTTTTAAT  700

seq1  TGGAATATTTGTCTTCTTGATGTTTACTTTG-TTTCTTTGAATTTTGTAT  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGAATATTTGTCTTCTTGATGTTTACTTTGTTTTCTTTGAATTTTGTAT  750

seq1  GTTCTAGATGCAAATTCTTTGTTAGATGAACAATTGTTGAAGAGA-TTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTTCTAGATGCAAATTCTTTGTTAGATGAACAATTGTTGAAGAGATTTTT  800

seq1  TTTTTTTATTCTGTAGGCTGAAGCTTTGCTCAAATGCTGGTGTCCTTAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTCTGTAGGCTGAAGCTTTGCTCAAATGCTGGTGTCCTTAGT  850

seq1  CATACAGAAAATTTTAAGCTTCATGGTGTCTTATTTATTAA-TTGTTGGT  897
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CATACAGAAAATTTTAAGCTTCATGGTGTCTTATTTATTAATTTGTTGGT  900

seq1  CTTAATGCATGTGTCATCA-TTGT-CCTGTTCAGAAAGACCTCCCCTTGT  945
      ||| ||||||||||||||| |||| |||||||||||||||||||||||||
seq2  CTT-ATGCATGTGTCATCATTTGTCCCTGTTCAGAAAGACCTCCCCTTGT  949

seq1  GCATATGACTTCAAATCTATTCTCTAC-TTTCTTTCCAAATGTATTCATA  994
      ||||||||||||||  ||||||||||| |||||| ||||  |||||||||
seq2  GCATATGACTTCAATCCTATTCTCTACTTTTCTTCCCAATGGTATTCATA  999

seq1  GTATT-GGTCTCATGTTG-AGGTCATTTAT-CTATTTGG  1030
      ||||| ||||||||| || ||||||||||| ||||||||
seq2  GTATTGGGTCTCATGGTGAAGGTCATTTATCCTATTTGG  1038


| Home | SequenceCutter | Blast | Download |