BAC Information

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BAC

Clone NameB6Ng01-183C03
Chromosome5 (Build37)
Map Location 80,670,346 - 80,670,788
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039506, LOC100039384, Lphn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183C03.bB6Ng01-183C03.g
ACCGA008840GA008841
length1,151437
definitionB6Ng01-183C03.b B6Ng01-183C03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacatttatcatgactgggtgttgtatttgg
tcaaatgaatgctttctcagcatctaatgagataatcctgtggtttttgt
ctttgagtttgttatagtggattacattgatgaattttcatatattgaac
catccctacattcctggaatgaagcctgcttgatcatgatggatgatcat
tttgatgtgttcttgtatttgttttgtgagaattttattgagtacttttg
cctcgatagtcaaaagggaaattggtctgaagtttcttttctttgttggg
ccttatatggtttaagtatcagaaaattgttgcttcatagaatgaattgg
gtagagaaccttctgtttctattttgtggaataatttaaggagtattgga
attaggtcctctttgaaggtctgctagaactctgcactaaacccatcagg
tcttgggctttttttttttttttttttttttttttggttgggagactatt
aatgactgtttctattcctttagaggataaaaaacagtttagatcattaa
tctgatcctgatttaactttagtacctggtacctgcatagaaaattggca
ctttcatccaggttttcaagttgtgttgagtataggcttttttagtagaa
tctgatgatattttggatctactcagattctgttgttatgtctccgtttt
tatgtctgatttttgttaattaggatactgtgccctctagtgagtctggc
taggggtttatctatcttgttgatttttttaaagaaccagctcctgattt
ggttgattctttgaatagatctttttgtttccacttggttaatttcagcc
ctgagtttgattatttcctgccattctactcctcttgggtgaatttgctt
cctttgggtcctagatcttttagtgtactgtcaggctgcttgtgtatgct
ttctcagattctttttggggacactcagagctaagagttttcctctgaga
actgcttctttgtgtccatacgttccgaatagatgagcttacgttttcat
taactcctggaaaggttttactcttttatttctcttgacaagtatcattg
agtaatgtgctcagctttcatgggtaatgtgggtctttcatacattctag
t

tctgggctctgtatatatccggaatatactatttaaaactccaaggtgct
tcttttcatctgctgagtggaatgtcttgtcttttcaggcatccctgttg
acctaattatccctttcttttgaactacagttaatgttgaatgtaggaaa
agagaagagctacagttaacacgcaactgaactgagtctgattagcatgt
tcccacagcacaaagaccctgagagtagcaagcttaaagctttcatggga
gttctggtgtagttatcgttctagaaaaaaaaaatgtttttacacagtca
tctttttcaaagcaattattattaccagctttgtataagaaggtattgtc
agtgttttcttaccctgcaaaaccaaataccacctccaagttttgtggta
ttagtgaacaaaaaggtgtgagggaggggcaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_80670346_80670788
seq2: B6Ng01-183C03.g_63_505

seq1  GAATTCTCTGGGCTCTGTATATATCCGGAATATACTATTTAAAACTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGGCTCTGTATATATCCGGAATATACTATTTAAAACTCCAA  50

seq1  GGTGCTTCTTTTCATCTGCTGAGTGGAATGTCTTGTCTTTTCAGGCATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTCTTTTCATCTGCTGAGTGGAATGTCTTGTCTTTTCAGGCATCC  100

seq1  CTGTTGACCTAATTATCCCTTTCTTTTGAACTACAGTTAATGTTGAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGACCTAATTATCCCTTTCTTTTGAACTACAGTTAATGTTGAATGT  150

seq1  AGGAAAAGAGAAGAGCTACAGTTAACACGCAACTGAACTGAGTCTGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGAGAAGAGCTACAGTTAACACGCAACTGAACTGAGTCTGATTA  200

seq1  GCATGTTCCCACAGCACAAAGACCCTGAGAGTAGCAAGCTTAAAGCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTCCCACAGCACAAAGACCCTGAGAGTAGCAAGCTTAAAGCTTTC  250

seq1  ATGGGAGTTCTGGTGTAGTTATCGTTCTAGAAAAAAAAAATGTTTTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGTTCTGGTGTAGTTATCGTTCTAGAAAAAAAAAATGTTTTTACA  300

seq1  CAGTCATCTTTTTCAAAGCAATTATTATTACCAGCTTTGTATAAGAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATCTTTTTCAAAGCAATTATTATTACCAGCTTTGTATAAGAAGGT  350

seq1  ATTGTCAGTGTTTTCTTACCCTGCAAAACCAAATACCACCTCCAAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCAGTGTTTTCTTACCCTGCAAAACCAAATACCACCTCCAAGTTTT  400

seq1  GTGGTATTAGTGAACAAAAAGGTGTGAGGGAGGGGCAGGAGGA  443
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATTAGTGAACAAAAAGGTGTGAGGGAGGGGCAGGAGGA  443


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