MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-183J10
Chromosome	5 (Build37)
Map Location	142,127,709 - 142,261,414
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Iqce, AA881470, 6530401C20Rik, Gna12, Card11, LOC623466
Downstream gene	Sdk1, LOC666727, Foxk1, C330006K01Rik, D930005D10Rik, Papolb, Mmd2, Wipi2, Slc29a4, Tnrc18
Link	Open Mouse BAC browser

Click to get alignment info.

name	Iqce (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74239 MGI:1921489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AA881470 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231841 MGI:1891679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	6530401C20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231842 MGI:2442258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gna12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14673 MGI:95767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Card11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108723 MGI:1916978
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623466 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1128 ESTs, 7 Proteins pseudo : _no_value

name	Sdk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330222 MGI:2444413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666727 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Foxk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17425 MGI:1347488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C330006K01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231855 MGI:1924908
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D930005D10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231858 MGI:2443088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Papolb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56522 MGI:1932115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75104 MGI:1922354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wipi2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74781 MGI:1923831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc29a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243328 MGI:2385330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnrc18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381742 MGI:3648294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Iqce (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130547 GeneID:74239 MGI:1921489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IQ motif containing E transcript_id : NM_028833.3

name	AA881470 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388761 GeneID:231841 MGI:1891679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EST AA881470 transcript_id : NM_181066.2

name	AA881470 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387704 GeneID:231841 MGI:1891679
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EST AA881470 transcript_id : NM_172724.2

name	6530401C20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326472 GeneID:231842 MGI:2442258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6530401C20 gene transcript_id : NM_173405.2

name	Gna12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129987 GeneID:14673 MGI:95767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein, alpha 12 transcript_id : NM_010302.2

name	Card11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28202024 GeneID:108723 MGI:1916978
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase recruitment domain family, member 11 transcript_id : NM_175362.1

name	Sdk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802600 GeneID:330222 MGI:2444413
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sidekick homolog 1 (chicken) transcript_id : NM_177879.4

name	Foxk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82546825 GeneID:17425 MGI:1347488
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box K1 transcript_id : NM_199068.2

name	C330006K01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82546848 GeneID:231855 MGI:1924908
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C330006K01 gene transcript_id : NM_172725.2

name	D930005D10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82546886 GeneID:231858 MGI:2443088
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D930005D10 gene transcript_id : NM_178702.3

name	Papolb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78000206 GeneID:56522 MGI:1932115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly (A) polymerase beta (testis specific) transcript_id : NM_019943.2

name	Mmd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379242 GeneID:75104 MGI:1922354
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : monocyte to macrophage differentiation-associated 2 transcript_id : NM_175217.5

name	Wipi2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350392 GeneID:74781 MGI:1923831
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain, phosphoinositide interacting 2 transcript_id : NM_178398.3

name	Slc29a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031958 GeneID:243328 MGI:2385330
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 29 (nucleoside transporters), member 4 transcript_id : NM_146257.2

name	Tnrc18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254658 GeneID:381742 MGI:3648294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : trinucleotide repeat containing 18 transcript_id : XM_355727.5

name	Iqce (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254171 GeneID:74239 MGI:1921489
definition	codon_start : 1 product : IQ motif containing E protein_id : NP_083109.2

name	AA881470 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30841004 CCDS:CCDS19823.1 GeneID:231841 MGI:1891679
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC231841 isoform 2 protein_id : NP_851411.1

name	AA881470 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370062 GeneID:231841 MGI:1891679
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC231841 isoform 1 protein_id : NP_766312.1

name	6530401C20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734160 CCDS:CCDS19824.1 GeneID:231842 MGI:2442258
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 note : archeobacterial metalloproteinase-like 1 product : archaemetzincin-1 protein_id : NP_775581.1

name	Gna12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754006 CCDS:CCDS19825.1 GeneID:14673 MGI:95767
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence TAS] [Evidence ISS]; GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IDA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IGI]; GO:0042733 - embryonic digit morphogenesis [Evidence IGI]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS] [Evidence IEA] [Evidence ISS]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0008360 - regulation of cell shape [Evidence IDA]; GO:0007266 - Rho protein signal transduction [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : guanine nucleotide binding protein, alpha 12 protein_id : NP_034432.1

name	Card11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202025 GeneID:108723 MGI:1916978
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030890 - positive regulation of B cell proliferation [Evidence IMP]; GO:0043123 - positive regulation of I-kappaB kinase/NF-kappaB cascade [Evidence IMP]; GO:0045086 - positive regulation of interleukin-2 biosynthesis [Evidence IMP]; GO:0050870 - positive regulation of T cell activation [Evidence IMP]; GO:0042102 - positive regulation of T cell proliferation [Evidence IMP]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0045577 - regulation of B cell differentiation [Evidence IMP]; GO:0050776 - regulation of immune response [Evidence IMP]; GO:0045580 - regulation of T cell differentiation [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0045061 - thymic T cell selection [Evidence IMP] codon_start : 1 exception : mismatches in translation product : caspase recruitment domain family, member 11 protein_id : NP_780571.1

name	Sdk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39979624 GeneID:330222 MGI:2444413
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation product : sidekick 1 protein_id : NP_808547.2

name	Foxk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82546826 CCDS:CCDS19826.1 GeneID:17425 MGI:1347488
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006777 - Mo-molybdopterin cofactor biosynthesis [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0048637 - skeletal muscle development [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : myocyte nuclear factor product : forkhead box K1 protein_id : NP_951031.2

name	C330006K01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82546849 GeneID:231855 MGI:1924908
definition	codon_start : 1 product : hypothetical protein LOC231855 protein_id : NP_766313.2

name	D930005D10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82546887 CCDS:CCDS19827.1 GeneID:231858 MGI:2443088
definition	GO_component : GO:0016459 - myosin [Evidence IEA] GO_function : GO:0003774 - motor activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC231858 protein_id : NP_848817.2

name	Papolb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910588 GeneID:56522 MGI:1932115
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0004652 - polynucleotide adenylyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : testis-specific poly(A) polymerase product : poly (A) polymerase beta (testis specific) protein_id : NP_064327.1

name	Mmd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202005 GeneID:75104 MGI:1922354
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0019835 - cytolysis [Evidence IEA] codon_start : 1 product : monocyte-to-macrophage differentiation factor 2 protein_id : NP_780426.1

name	Wipi2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30409972 CCDS:CCDS19828.1 GeneID:74781 MGI:1923831
definition	codon_start : 1 product : WD repeat domain, phosphoinositide interacting 2 protein_id : NP_848485.1

name	Slc29a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122849 GeneID:243328 MGI:2385330
definition	codon_start : 1 product : solute carrier family 29 (nucleoside transporters), member 4 protein_id : NP_666369.1

name	Tnrc18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254659 GeneID:381742 MGI:3648294
definition	codon_start : 1 product : similar to Tnrc18 protein protein_id : XP_355727.5

name	LOC666727 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666727
definition	number : 1 pseudo : _no_value

name	LOC666727 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666727
definition	number : 2 pseudo : _no_value

name	LOC623466 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254660 GeneID:623466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1128 ESTs, 7 Proteins product : similar to MGC27348 protein pseudo : _no_value transcript_id : XR_033501.1

clone name	MSMg01-441L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349E15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-444E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351G13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-108M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334H17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-183J10.b	B6Ng01-183J10.g
ACC	GA009174	GA009175
length	958	815
definition	B6Ng01-183J10.b	B6Ng01-183J10.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(142,127,709 - 142,128,653)	(142,260,324 - 142,261,414)
sequence	gaattcctaataaccacaaactgaaaatataaaaatgtccgtcatctggc tatcaggagatccctctgctacccttccctctgtagtgtggactactgtt ctgtgattgaaatgataggtgcacgtgactggggtgtgtctctaaggagc cacggtggcaaaaggcttctgttccaaaggtcatgcactgcactgcacag ttctattcctatgtggtttgtgtttatgaaatgataaagtcagtgtagtg gtaaacaggtaacagtgaggttggaaggagcaagaggtgtgggtcacagg gaaaatgcttatggccttgagaggctctgcattttgactgtatcagcagc actgccctggctccattttcccagggtgattcttcaagctgtaacccttg taggagtgagctccaggaaccacaggcagtcttatttcttgtacctgcct gtgaacctgcagttaagaccctggagggagggagagggaggagaaatggg tggcctccagacattcttagaaaaggttctgccctcagaggttacagcat ttcaaaaggaaaaaactctagaatctatttttgactgtgctgaagcagcc agtatcctaaaaagttcaagatggtagattctcaggcaggcatggctcag ctatttgcccaactcttgactcctagtttgggtcctgtgtatttcaaaat taaacatgtttaatactgttttcaaaaagcatgggggaccttctgagtat ttccaaagggagtactagatcttttctaagctccaaagagtattgaaggt aaaaggactctatggtcatacagctggtggcttcagagcaagcttgggca ttcagtcatggggtcattgccctggtacctccctttccggtttggtctga atagttagtaaattagtaactccttagggctttaatttcttcaatgtcta tgagaact	gaattccagagagagacagaaggatcagaggttcaaggtcagacttggct gcatagtaatttgaggtcagcctagctaaatgagaccctgtctcaacaaa acacaacacaacaacaacgtaattgttagagaaaaatgacattagacatg gataatcagatgtccgggggagctctgcacatgggatcctgtagttgatc tcctttgctgcacttgtccaatccaagggaagcccctacatcacaacaca ccatctctcagggatataatgttgatgtagaaattgtcaaggctccggac ttgtggtttgtgaaaatagccccactgggtaccttgtagatgcctgaaga ccaggaaagaaaaggaagggcattcaatgaccccaatttttcgtgtagtg aggcagtgagcaaccatttaagtcccaggcttgggtctgagtgatttcgg tctcactcaagccgaactgagagcacatagttttcattgcacagagcctg aactggcctatctgaacacactgcagtcatcttccttggggaagctggtg ggtcaatgccaggagttctggggatgtgccaaagtagttttcagaatctg caagagagcttttcctgtcttccatgaaaaggtaaatcatattaaactac caatagatattgttattgattgatggatggattatgtgtttaaatgtgtg tgtgtgcatgcatgtgtgtgtgcatgcatgttgtgtgtatgcatgtgtat gggtgtgtgtgcatgcgtttgtttgcatgtgcctgcctgtgtgtggcatg cgtgtgtgttgtgtg
quality values	Open. Hide. 41 17 33 25 58 58 58 58 52 46 62 52 62 62 21 23 47 42 62 62 62 62 62 49 62 62 54 51 62 62 62 62 62 22 15 19 21 17 24 22 19 22 19 29 40 32 28 46 56 62 59 62 62 59 59 59 62 59 59 59 59 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 49 51 50 46 56 43 50 34 32 54 50 54 48 59 59 54 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 59 62 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 46 59 59 56 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 56 54 62 59 49 54 56 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 59 46 33 48 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 59 62 59 62 62 62 59 62 59 59 62 62 62 59 62 62 62 59 62 59 59 62 59 59 59 47 43 59 59 43 62 62 59 62 62 59 32 62 56 56 62 56 44 44 44 56 56 44 51 56 56 51 56 38 24 62 37 44 51 56 32 62 35 33 35 22 39 42 62 54 56 47 62 62 51 62 62 56 56 56 56 56 56 56 51 39 37 22 50 50 51 56 62 41 39 62 62 56 50 51 56 51 56 56 62 62 62 62 62 62 62 14 39 38 25 38 27 16 23 12 30 31 39 38 30 30 33 34 47 56 31 38 38 38 35 39 33 47 24 43 22 21 25 9 31 31 20 37 43 42 32 30 54 50 42 32 56 32 38 56 52 52 35 62 35 41 14 40 62 31 28 52 21 53 32 43 28 39 38 46 52 52 31 31 39 38 33 33 28 34 35 48 15 18 43 31 36 52 48 42 41 28 38 50 18 35 31 21 13 37 15 30 21 44 36 37 28 32 25 17 22 27 33 34 48 27 52 8 18 29 41 35 22 38 58 32 50 52 28 28 16 46 22 33 13 12 17 16 35 49 47 32 41 13 40 22 22 20 28 19 12 14 40 17 25 22 19 46 35 42 41 11 37 42 13 35 13 25 12 14 13 17 19 12 10 13 39 38 34 20 26 29 32 19 15 13 13 25 20 18 16 12 9 12 9 9 6 7 9 9 9 14 13 14 14 13 28 9 27 30 29 40 15 32 24 25 32 17 10 27 12 10 6 9 10 10 15 14 41 9 50 20 11 15 6 15 19 15 20 24 28 19 6 25 28 27 24 4 22 14 17 9 22 15 12 9 16 16 18 18 12 6 6 9 6 19 21 31 19 13 10 22 16 18 7 30 16 18 16 10 21 20 14 18 16 11 15 13 21 17 11 31 40 24 16 23 8 7 37 17 7 17 37 16 18 18 13 30 24 9 18 26 14 11 7 9 9 10 19 20 31 15 9 29 21 8 13 18 9 9 8 11 12 7 17 18 17 41 14 12 16 13 13 14 13 6 9 26 32 24 18 17 28 11 16 16 5 5 9 15 6 10 10 9 6	Open. Hide. 62 35 46 47 62 62 47 31 62 54 47 44 10 25 16 15 20 10 10 28 24 18 38 15 20 35 44 59 62 62 62 62 62 59 56 62 62 62 62 62 59 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 49 59 56 59 43 43 48 56 50 54 32 56 59 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 59 54 62 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 51 56 38 32 32 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 56 54 56 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 54 54 54 58 54 58 58 58 58 58 58 58 58 58 58 58 58 37 58 58 58 58 52 58 58 58 54 52 52 58 54 58 52 54 54 53 58 45 40 58 58 58 58 58 58 58 47 41 35 58 54 58 58 54 58 58 58 46 54 52 33 54 58 58 58 50 58 37 58 48 40 58 58 58 50 58 58 43 58 27 58 50 42 58 58 58 52 52 58 50 58 49 50 50 44 34 37 26 54 49 58 54 58 49 42 54 32 50 58 54 54 51 50 54 53 41 36 22 58 54 49 49 50 58 39 24 58 51 46 32 46 42 49 46 58 58 50 58 50 54 51 58 41 39 58 43 40 37 58 58 29 32 58 40 50 32 58 42 31 58 52 58 50 58 43 41 54 41 42 51 42 53 50 49 39 54 39 54 39 45 45 29 40 52 46 7 20 49 37 38 47 54 38 52 40 51 53 32 51 44 40 32 35 35 7 16 16 27 34 44 40 40 38 37 42 42 37 38 51 32 47 33 35 44 49 35 39 33 33 33 37 41 52 31 25 31 34 29 31 41 27 36 11 27 41 14 27 19 30 32 23 29 32 15 30 31 32 30 46 28 15 16 32 6 14 15 23 33 25 26 11 15 33 38 23 12 18 19 10 20 15 9 5 16 11 30 20 10 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_142127709_142128653
seq2: B6Ng01-183J10.b_43_1000

seq1  GAATTCCTAATAACCACAAACTGAAAATATAAAAATGTCCGTCATCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAATAACCACAAACTGAAAATATAAAAATGTCCGTCATCTGGC  50

seq1  TATCAGGAGATCCCTCTGCTACCCTTCCCTCTGTAGTGTGGACTACTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGAGATCCCTCTGCTACCCTTCCCTCTGTAGTGTGGACTACTGTT  100

seq1  CTGTGATTGAAATGATAGGTGCACGTGACTGGGGTGTGTCTCTAAGGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATTGAAATGATAGGTGCACGTGACTGGGGTGTGTCTCTAAGGAGC  150

seq1  CACGGTGGCAAAAGGCTTCTGTTCCAAAGGTCATGCACTGCACTGCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTGGCAAAAGGCTTCTGTTCCAAAGGTCATGCACTGCACTGCACAG  200

seq1  TTCTATTCCTATGTGGTTTGTGTTTATGAAATGATAAAGTCAGTGTAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCCTATGTGGTTTGTGTTTATGAAATGATAAAGTCAGTGTAGTG  250

seq1  GTAAACAGGTAACAGTGAGGTTGGAAGGAGCAAGAGGTGTGGGTCACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAGGTAACAGTGAGGTTGGAAGGAGCAAGAGGTGTGGGTCACAGG  300

seq1  GAAAATGCTTATGGCCTTGAGAGGCTCTGCATTTTGACTGTATCAGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCTTATGGCCTTGAGAGGCTCTGCATTTTGACTGTATCAGCAGC  350

seq1  ACTGCCCTGGCTCCATTTTCCCAGGGTGATTCTTCAAGCTGTAACCCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCTGGCTCCATTTTCCCAGGGTGATTCTTCAAGCTGTAACCCTTG  400

seq1  TAGGAGTGAGCTCCAGGAACCACAGGCAGTCTTATTTCTTGTACCTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTGAGCTCCAGGAACCACAGGCAGTCTTATTTCTTGTACCTGCCT  450

seq1  GTGAACCTGCAGTTAAGACCCTGGAGGGAGGGAGAGGGAGGAGAAATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACCTGCAGTTAAGACCCTGGAGGGAGGGAGAGGGAGGAGAAATGGG  500

seq1  TGGCCTCCAGACATTCTTAGAAAAGGTTCTGCCCTCAGAGGTTACAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCCAGACATTCTTAGAAAAGGTTCTGCCCTCAGAGGTTACAGCAT  550

seq1  TTCAAAAGGAAAAAACTCTAGAATCTATTTTTGACTGTGCTGAAGCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAGGAAAAAACTCTAGAATCTATTTTTGACTGTGCTGAAGCAGCC  600

seq1  AGTATCCTAAAAAGTTCAAGATGGTAGATTCTCAGGCAGGCATGGCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCTAAAAAGTTCAAGATGGTAGATTCTCAGGCAGGCATGGCTCAG  650

seq1  CTA-TTGCCCAACTCTTGACTCCTAG-TTGGGTCCTGTGTA-TTCAAAAT  697
      ||| |||||||||||||||||||||| |||||||||||||| ||||||||
seq2  CTATTTGCCCAACTCTTGACTCCTAGTTTGGGTCCTGTGTATTTCAAAAT  700

seq1  TAAACATG-TTAATACTGTTT--CAAAAGCATGGGGGACCTTCTGAGTA-  743
      |||||||| ||||||||||||   ||||||||||||||||||||||||| 
seq2  TAAACATGTTTAATACTGTTTTCAAAAAGCATGGGGGACCTTCTGAGTAT  750

seq1  TTCCAAA-GGAGTACTAGATCTTTTCTAAGCTCCAAAGAGTATTG-AGGT  791
      ||||||| ||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCCAAAGGGAGTACTAGATCTTTTCTAAGCTCCAAAGAGTATTGAAGGT  800

seq1  TAAAGGACTCTATGGTCATACAAGCTGGTGGCTTCAGAGCAGGCTGGGGC  841
       |||||||||||||||||||| ||||||||||||||||||| ||| ||||
seq2  AAAAGGACTCTATGGTCATAC-AGCTGGTGGCTTCAGAGCAAGCTTGGGC  849

seq1  A-TCAGTCATGGGGTCA-TGCCCTGGTA-CTACCCTTCCGGTTT-GTCTG  887
      | ||||||||||||||| |||||||||| || || ||||||||| |||||
seq2  ATTCAGTCATGGGGTCATTGCCCTGGTACCTCCCTTTCCGGTTTGGTCTG  899

seq1  -ATAGTTAGCAAATTAGTTACTCCTTAGGGC-TTAAGTTCTTCAATGTCA  935
       |||||||| |||||||| |||||||||||| |||| |||||||||||| 
seq2  AATAGTTAGTAAATTAGTAACTCCTTAGGGCTTTAATTTCTTCAATGTC-  948

seq1  TATGAGATCT  945
      ||||||| ||
seq2  TATGAGAACT  958

seq1: chr5_142260324_142261414
seq2: B6Ng01-183J10.g_69_883 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACATACACACACACT  50
                                                        
seq2  --------------------------------------------------  0

seq1  CATGCACACACACTCACACACATATGCATGCACACACATAGGCAAACACA  100
                                                        
seq2  --------------------------------------------------  0

seq1  TATACACCAATGCATATACACATACTCATACACACATACATTCATACACA  150
                                                        
seq2  --------------------------------------------------  0

seq1  CTCAAACACATACATGTATGTATGTACACATACCACATTCACACACAGGC  200
                                                        
seq2  --------------------------------------------------  0

seq1  ACACATACATGCATGCACACCCACACACATACATTCATGCACACACACCA  250
                                                        
seq2  --------------------------------------------------  0

seq1  CATTCTCACACACACACACACACACACACACACACACACACGCATGCCAC  300
                                |||||| |||||||||||||||||
seq2  --------------------------CACACA-ACACACACGCATGCCAC  23

seq1  ACACAGGCAGGCACATGCAAACAAACGCATGCACACACACCCATACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGCAGGCACATGCAAACAAACGCATGCACACACACCCATACACAT  73

seq1  GCATACACAC-ACATGCATGCACACACACATGCATGCACACACACACATT  399
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCATACACACAACATGCATGCACACACACATGCATGCACACACACACATT  123

seq1  TAAACACATAATCCATCCATCAATCAATAACAATATCTATTGGTAGTTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACATAATCCATCCATCAATCAATAACAATATCTATTGGTAGTTTA  173

seq1  ATATGATTTACCTTTTCATGGAAGACAGGAAAAGCTCTCTTGCAGATTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATTTACCTTTTCATGGAAGACAGGAAAAGCTCTCTTGCAGATTCT  223

seq1  GAAAACTACTTTGGCACATCCCCAGAACTCCTGGCATTGACCCACCAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTACTTTGGCACATCCCCAGAACTCCTGGCATTGACCCACCAGCT  273

seq1  TCCCCAAGGAAGATGACTGCAGTGTGTTCAGATAGGCCAGTTCAGGCTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAGGAAGATGACTGCAGTGTGTTCAGATAGGCCAGTTCAGGCTCT  323

seq1  GTGCAATGAAAACTATGTGCTCTCAGTTCGGCTTGAGTGAGACCGAAATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAATGAAAACTATGTGCTCTCAGTTCGGCTTGAGTGAGACCGAAATC  373

seq1  ACTCAGACCCAAGCCTGGGACTTAAATGGTTGCTCACTGCCTCACTACAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGACCCAAGCCTGGGACTTAAATGGTTGCTCACTGCCTCACTACAC  423

seq1  GAAAAATTGGGGTCATTGAATGCCCTTCCTTTTCTTTCCTGGTCTTCAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTGGGGTCATTGAATGCCCTTCCTTTTCTTTCCTGGTCTTCAGG  473

seq1  CATCTACAAGGTACCCAGTGGGGCTATTTTCACAAACCACAAGTCCGGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACAAGGTACCCAGTGGGGCTATTTTCACAAACCACAAGTCCGGAG  523

seq1  CCTTGACAATTTCTACATCAACATTATATCCCTGAGAGATGGTGTGTTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACAATTTCTACATCAACATTATATCCCTGAGAGATGGTGTGTTGT  573

seq1  GATGTAGGGGCTTCCCTTGGATTGGACAAGTGCAGCAAAGGAGATCAACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGGGGCTTCCCTTGGATTGGACAAGTGCAGCAAAGGAGATCAACT  623

seq1  ACAGGATCCCATGTGCAGAGCTCCCCCGGACATCTGATTATCCATGTCTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATCCCATGTGCAGAGCTCCCCCGGACATCTGATTATCCATGTCTA  673

seq1  ATGTCATTTTTCTCTAACAATTACGTTGTTGTTGTGTTGTGTTTTGTTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTTTTCTCTAACAATTACGTTGTTGTTGTGTTGTGTTTTGTTGA  723

seq1  GACAGGGTCTCATTTAGCTAGGCTGACCTCAAATTACTATGCAGCCAAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTCTCATTTAGCTAGGCTGACCTCAAATTACTATGCAGCCAAGT  773

seq1  CTGACCTTGAACCTCTGATCCTTCTGTCTCTCTCTGGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTTGAACCTCTGATCCTTCTGTCTCTCTCTGGAATTC  815

BAC Information

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BAC

BAC End Information

Alignment Information