BAC Information

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BAC

Clone NameB6Ng01-184C23
Chromosome5 (Build37)
Map Location 80,879,801 - 80,880,542
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039506, LOC100039384, Lphn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184C23.bB6Ng01-184C23.g
ACCGA009623GA009624
length1,040426
definitionB6Ng01-184C23.b B6Ng01-184C23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttttaccccaaccaaatttcttttagagataatttctagctc
taattgtcctctaaaataaattgaaacatctaacagatacatatattata
ttaaaaattcaattaatattctttccagtaaaatttcagagaacttaatt
atgcatggtacatttactttaaaataaaaatatttaaagttaaaatctgt
ggtatgagtattttctaccagggattattattatgtattaaattaagagc
atagtaaatgaaataataaatggtctaaatattactaagggaaagtactg
ctatatttttagatgaaattcaaaaaatattttattgtctaaaaataata
tgtcattgtcaaagagaattgatttgaagctattgatgcttgtaagtcct
taaattaaaaaggaaaaaagaaatatcaagttaataatttaatgatttat
catctacctattttagaaagataagtacaagaaaggaggagataatttaa
atcaaaataatgaaataaaaaaagcaaaaaaaaaatgaaatccaagaaat
aataaaagattaaaaaaaataaagtgttccattgcagatgttgataaggt
tgaccaatatttacccaagttaacccaaagaaatacagggaagatctaaa
ttaataaattggagattaagtgtggtaactataacagacacaaagaaaat
ctggaaccttctaattgaatcttatgtacaatatagaagtttccaaaaat
acatataactatgatgatgattgatatatgtgagatcatcaaattatggt
ggagtctcagctgaacatctcttgtcaccaaaagaaacttccagtcctgg
gatcaaaacacgtctaattgagttgttgaccaaatagattacatgggaac
ctccaaataagcacagatgttgtgaaggctattttttttttaatttttgc
ttttaacaaacatgcagtcagatcctcaaggagaaattgagatagtgact
actttctgggaacatactatctgcacactaataaagggaa

tcctctgtaaaagaactgcagggactaaaatggagaagagactgagggaa
aggagtttcaatgacaggcccaacttgggatctatctcaatgggaggctc
ctaggtctgatacttaatgatgctgtggtgtgcttgcagacagaagcata
gcatggttgtccctggagaggtacaataagcatctgacttagatagatgc
agatacttacactcaaccaatggactgaagtctggggactgctgtgttta
aggtaaggaaaggctggaagaagctgaggagggcaaccacataggaagac
cagcagtctcaactaacccagacccctgagaactctccgggtcttgcctc
agtgaaagaagagaagcctaccatatcttgagagtcttggggtcccaggg
agtggggagggtatggagagggaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_80879801_80880542
seq2: B6Ng01-184C23.b_44_785 (reverse)

seq1  AAACTTCTATATTGTACATAAGATTCAATTAGAAGGTTCCAGATTTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTATATTGTACATAAGATTCAATTAGAAGGTTCCAGATTTTCTT  50

seq1  TGTGTCTGTTATAGTTACCACACTTAATCTCCAATTTATTAATTTAGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGTTATAGTTACCACACTTAATCTCCAATTTATTAATTTAGATC  100

seq1  TTCCCTGTATTTCTTTGGGTTAACTTGGGTAAATATTGGTCAACCTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGTATTTCTTTGGGTTAACTTGGGTAAATATTGGTCAACCTTATC  150

seq1  AACATCTGCAATGGAACACTTTATTTTTTTTAATCTTTTATTATTTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTGCAATGGAACACTTTATTTTTTTTAATCTTTTATTATTTCTTG  200

seq1  GATTTCATTTTTTTTTTGCTTTTTTTATTTCATTATTTTGATTTAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATTTTTTTTTTGCTTTTTTTATTTCATTATTTTGATTTAAATTA  250

seq1  TCTCCTCCTTTCTTGTACTTATCTTTCTAAAATAGGTAGATGATAAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCTTTCTTGTACTTATCTTTCTAAAATAGGTAGATGATAAATCA  300

seq1  TTAAATTATTAACTTGATATTTCTTTTTTCCTTTTTAATTTAAGGACTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATTAACTTGATATTTCTTTTTTCCTTTTTAATTTAAGGACTTA  350

seq1  CAAGCATCAATAGCTTCAAATCAATTCTCTTTGACAATGACATATTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATCAATAGCTTCAAATCAATTCTCTTTGACAATGACATATTATTT  400

seq1  TTAGACAATAAAATATTTTTTGAATTTCATCTAAAAATATAGCAGTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAATAAAATATTTTTTGAATTTCATCTAAAAATATAGCAGTACTT  450

seq1  TCCCTTAGTAATATTTAGACCATTTATTATTTCATTTACTATGCTCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAGTAATATTTAGACCATTTATTATTTCATTTACTATGCTCTTAA  500

seq1  TTTAATACATAATAATAATCCCTGGTAGAAAATACTCATACCACAGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATACATAATAATAATCCCTGGTAGAAAATACTCATACCACAGATTT  550

seq1  TAACTTTAAATATTTTTATTTTAAAGTAAATGTACCATGCATAATTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTAAATATTTTTATTTTAAAGTAAATGTACCATGCATAATTAAGT  600

seq1  TCTCTGAAATTTTACTGGAAAGAATATTAATTGAATTTTTAATATAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAAATTTTACTGGAAAGAATATTAATTGAATTTTTAATATAATAT  650

seq1  ATGTATCTGTTAGATGTTTCAATTTATTTTAGAGGACAATTAGAGCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCTGTTAGATGTTTCAATTTATTTTAGAGGACAATTAGAGCTAGA  700

seq1  AATTATCTCTAAAAGAAATTTGGTTGGGGTAAAAGTGAATTC  742
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTCTAAAAGAAATTTGGTTGGGGTAAAAGTGAATTC  742


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