BAC Information

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BAC

Clone NameB6Ng01-184K06
Chromosome5 (Build37)
Map Location 49,979,464 - 49,979,639
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnip4, LOC100041668, LOC100041659, EG433885
Downstream geneLOC666223, Gpr125, EG637307
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184K06.bB6Ng01-184K06.g
ACCGA009965GA009966
length1,020188
definitionB6Ng01-184K06.b B6Ng01-184K06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctgtaagttgtaagaacacagtctttcattcatgttcattta
ttttttttcaaaatgttattatatattttcatcatttagatttccaatgc
tatcccaaaagtcccccatatctgcctgcccactcccctacccacccatt
cctacttcttggtcctggtattcccctctactgaggcatgtaaagtttgc
aagacaaaggggtctcgcttcccaataatggccaactaggccatcttccg
atacatatgcagctagagacagtagatcaggaggtactggttagttcata
ttgttgttccacgtatagggtttcagactcattcatctccttgggtattt
tctgtagctccaccattaggggctctgtattccatctaatagctgactgt
gagcatccacttctgtgttttccaggcacctgcatagcctcacaagagac
agctatatcagggtcctttcagaaaaaaatagctggcatatgcaatggag
tcagattttggaggctgattatgggatggatcccctggtgtggcagtctc
tagatggcccatcctttcatctcagctccaacctttctctgtaactctta
cattgggtgttttgttccaatttatattaaggggcaaagtgtccaaactt
tgctctttgttcttcttgagtttcatgtgttttgcaacttgtatcttata
ttttgggtattctaatttctgggctaatagtcacttaacagcgagtacat
atcatgtgagtgcttttgtgattcggtcaccttactcaggatgatgacct
gcaggtccatccatttgcctaggaatttcataaattcattctttttaata
gctgagtagttctcaactgtgtaaatgtaccacgttttctgtatccatgc
ctctgttgagggacatctgggttctttccagcttcttggctattataaat
agggctgctatgaacatagtgaaacatgtgtccttctaccatttgggaca
tcttctggatatatgcccag
ttagtttagtttgaggccctgtcctgtccaacaggacttagttattccgt
gggttgaggaggaacagggcctgaaatgatcggacaaaggagatctagac
caagcaaagagttgtcaaggtctgtttaatgaaggctaggagactgatta
taagcacacagtgagagaaaatggggggaggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_49979464_49979639
seq2: B6Ng01-184K06.g_87_256 (reverse)

seq1  CCCCCAACCCCTCCCTATTTTCTCTCAGTGTGTGCTTATAATCAGGCTCT  50
      |||||  || | ||| ||||||||||| ||||||||||||||||| ||| 
seq2  CCCCCCCCCTCCCCCCATTTTCTCTCACTGTGTGCTTATAATCAGTCTCC  50

seq1  TAGCCTTCATTAAACAGACCTTGACAACTCTTTGCTTGGTCTCGCTTCCC  100
      |||||||||||||||||||||||||||||||||||||||||| | |  ||
seq2  TAGCCTTCATTAAACAGACCTTGACAACTCTTTGCTTGGTCTAGATCTCC  100

seq1  TTTTTCTGGTCATTTCTCTTTCAGGCCCTGGTCCTTCTCAACCCACGGAA  150
      ||| || | |||      |||||||||||| |||| ||||||||||||||
seq2  TTTGTCCGATCA------TTTCAGGCCCTGTTCCTCCTCAACCCACGGAA  144

seq1  TAACTAAGTCCTGCTGGACGGGACAG  176
      ||||||||||||| ||||| ||||||
seq2  TAACTAAGTCCTGTTGGACAGGACAG  170