BAC Information

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BAC

Clone NameB6Ng01-184P21
Chromosome5 (Build37)
Map Location 115,350,245 - 115,475,200
singlet/doubletdoublet
Overlap geneOasl2, Oasl1, 2210016L21Rik, Tcf1, Sppl3
Upstream geneCoro1c, Ssh1, Dao1, Svop, Usp30, Alkbh2, Ung, Acacb, Foxn4, Myo1h, Kctd10, Ube3b, Mmab, Mvk, BC057022, Trpv4, Gltp, Tchp, Git2, 4930515G01Rik, Ankrd13a, 1500011B03Rik, 2610524H06Rik, LOC664895, 4930519G04Rik
Downstream geneAcads, AA407659, 2410014A08Rik, Cabp1, Pop5, Rnf10, Coq5, Dynll1, Sfrs9, 2010003O18Rik, Triap1, Cox6a1, Msi1, Pla2g1b, Sirt4, LOC638021, Pxn, Arbp, Gcn1l1, LOC100042199, Rab35, Ccdc64, LOC665032, Cit, Prkab1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184P21.bB6Ng01-184P21.g
ACCGA010224GA010225
length1,143549
definitionB6Ng01-184P21.b B6Ng01-184P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,474,075 - 115,475,200)(115,350,245 - 115,350,799)
sequence
gaattcacaaagggctagaaacagcctgtggtcagaatgaagaaaccacc
atagagcccagccccgaagtctctgtaagaatgtctgcaaggatcccttc
atagtgggcgctaaatcagtcgtcagtccaagcacactcatttccgtgga
tgccatacacacaaagcagcacactaatccagaagttaagcacagcataa
tgccatctgacaacaaaagtcagcacccaggaaaacacaaagctcccggt
gtctaggcctgaaaggcgcaggaaaagatgaaatgcccagaagagagaag
agagtaatggaaggagggggactagagagatggctcagtgattgagagtg
agcacatgatgcccactaaaggaccgagttctgttctaccacccacgctg
ggggctcataaccctgtttaactccagctccagggatacagaccctcttc
tggtcttcacatacacaggctacattcctagacacacacatgcatatgca
gtgtaagaattaataatgaatcttaaaaaagagcaagttatgcaaataaa
tagaccttcaaggagctgtggcatgagcctaggctgacaaaatgacagca
tcttaagtataaaagaccatccaaaaccgccttcaggtagtgtcagtcct
tagctttgagctccctcagtaggggccacaggcattctggagagagattt
ttctgctctacatcaactgatgttcaacatatagaccaagctattttttt
ttaaagtgaaatacaccaactcattaggtcagttacagtctaaattatag
gtggtgtaactctagtaccacagacagaattctgtacagcctgtaccaat
cattaagatagtttggacacacagtgggctcacaccattaatccccacca
cttgagaggcagaggcaggcagatctcttgagttcaagaccagtctggtt
ctacagggttcccaggacagccagtatttacacagttttctgtctttgaa
aaccagaaacaaacaaagaaaagatgtatagaacaagctcaggcagtaat
tggcaccacgcccttgatcccagcacttgggaggccaaaggcaggcagat
tttctgagtttcaagatcagccttgtcctacgagtgagttcca
ctacccaccctctggaaaacaccaggttaggcaaacattccaaggtcttt
agggtccaacagaactgtattagaccctttaaaacaaggctctcaagctg
ggtggtgatggagcaagcctttattcccagcacttggaaagcagaggcag
gtggatctttgtgagtttgagaccagcctggtctacagagcaagttccag
gacagtcagggctacacagagaaaccctgtctcaaaaagtaagtaagtaa
atgaaataaataagcaaacaaataaataacaagactctcgtattttacaa
cttgtattcctcttgggcccacaccttagcatgctcaaaatcgagcatac
taacttactacatgggataatgttgagtcatcagaactgatatttgctca
catttgagataccagacggcgattgcctgtgcttgcctttaagtttacct
ccttaatggagccgatctgaggatttcatgagcctgaaggtctacctgac
catcccggcctctattaatttagctttgaggtgggggagggggcgaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_115474075_115475200
seq2: B6Ng01-184P21.b_48_1190 (reverse)

seq1  TGGAACTCACTCTGTA-GACCAGGCTGACCTTG-AACTCAG-AAATCTGC  47
      |||||||||||| ||| ||| ||||||| |||| ||||||| ||||||||
seq2  TGGAACTCACTC-GTAGGACAAGGCTGATCTTGAAACTCAGAAAATCTGC  49

seq1  CTGCCTCT-GCCTCCCAAGTGCTGGGATTAAAGGCGT-GTGCC-ATTACT  94
      |||||| | ||||||||||||||||||| || ||||| ||||| ||||||
seq2  CTGCCTTTGGCCTCCCAAGTGCTGGGATCAAGGGCGTGGTGCCAATTACT  99

seq1  GCCTG-GCTTG-TCTCTCCTTCTTTTCTTTGTTTGTTTCT-GTTTTC-AA  140
      ||||| ||||| ||| | | |||||||||||||||||||| |||||| ||
seq2  GCCTGAGCTTGTTCTATACATCTTTTCTTTGTTTGTTTCTGGTTTTCAAA  149

seq1  GACAG-AAACTGTGT-AATACTGGCTGT-CTTGGAACCCTGTAG-ACCAG  186
      ||||| ||||||||| |||||||||||| || |||||||||||| |||||
seq2  GACAGAAAACTGTGTAAATACTGGCTGTCCTGGGAACCCTGTAGAACCAG  199

seq1  ACTGGTCTTGAACTCAAGAGATCTGCCTGCCTCTGCCTCTCAAGTGGT-G  235
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACTGGTCTTGAACTCAAGAGATCTGCCTGCCTCTGCCTCTCAAGTGGTGG  249

seq1  GGATTAATGGTGTGAG-CCACTGTGTGTCC-AACTATCTTAATGATTGGT  283
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  GGATTAATGGTGTGAGCCCACTGTGTGTCCAAACTATCTTAATGATTGGT  299

seq1  ACAGGCTGTACAGAATTCTGTCTGTGGTACTAGAGTTACACCACCTATAA  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTGTACAGAATTCTGTCTGTGGTACTAGAGTTACACCACCTATAA  349

seq1  TTTAGACTGTAACTGACCTAATGAGTTGGTGTATTTCACTTT-AAAAAAA  382
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTAGACTGTAACTGACCTAATGAGTTGGTGTATTTCACTTTAAAAAAAA  399

seq1  ATAGCTTGGTCTATATGTTGAACATCAGTTGATGTAGAGCAGAAAAATCT  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTGGTCTATATGTTGAACATCAGTTGATGTAGAGCAGAAAAATCT  449

seq1  CTCTCCAGAATGCCTGTGGCCCCTACTGAGGGAGCTCAAAGCTAAGGACT  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGAATGCCTGTGGCCCCTACTGAGGGAGCTCAAAGCTAAGGACT  499

seq1  GACACTACCTGAAGGCGGTTTTGGATGGTCTTTTATACTTAAGATGCTGT  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTACCTGAAGGCGGTTTTGGATGGTCTTTTATACTTAAGATGCTGT  549

seq1  CATTTTGTCAGCCTAGGCTCATGCCACAGCTCCTTGAAGGTCTATTTATT  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTCAGCCTAGGCTCATGCCACAGCTCCTTGAAGGTCTATTTATT  599

seq1  TGCATAACTTGCTCTTTTTTAAGATTCATTATTAATTCTTACACTGCATA  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAACTTGCTCTTTTTTAAGATTCATTATTAATTCTTACACTGCATA  649

seq1  TGCATGTGTGTGTCTAGGAATGTAGCCTGTGTATGTGAAGACCAGAAGAG  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTGTGTCTAGGAATGTAGCCTGTGTATGTGAAGACCAGAAGAG  699

seq1  GGTCTGTATCCCTGGAGCTGGAGTTAAACAGGGTTATGAGCCCCCAGCGT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTATCCCTGGAGCTGGAGTTAAACAGGGTTATGAGCCCCCAGCGT  749

seq1  GGGTGGTAGAACAGAACTCGGTCCTTTAGTGGGCATCATGTGCTCACTCT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTAGAACAGAACTCGGTCCTTTAGTGGGCATCATGTGCTCACTCT  799

seq1  CAATCACTGAGCCATCTCTCTAGTCCCCCTCCTTCCATTACTCTCTTCTC  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACTGAGCCATCTCTCTAGTCCCCCTCCTTCCATTACTCTCTTCTC  849

seq1  TCTTCTGGGCATTTCATCTTTTCCTGCGCCTTTCAGGCCTAGACACCGGG  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGGCATTTCATCTTTTCCTGCGCCTTTCAGGCCTAGACACCGGG  899

seq1  AGCTTTGTGTTTTCCTGGGTGCTGACTTTTGTTGTCAGATGGCATTATGC  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGTGTTTTCCTGGGTGCTGACTTTTGTTGTCAGATGGCATTATGC  949

seq1  TGTGCTTAACTTCTGGATTAGTGTGCTGCTTTGTGTGTATGGCATCCACG  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTAACTTCTGGATTAGTGTGCTGCTTTGTGTGTATGGCATCCACG  999

seq1  GAAATGAGTGTGCTTGGACTGACGACTGATTTAGCGCCCACTATGAAGGG  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGTGTGCTTGGACTGACGACTGATTTAGCGCCCACTATGAAGGG  1049

seq1  ATCCTTGCAGACATTCTTACAGAGACTTCGGGGCTGGGCTCTATGGTGGT  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGCAGACATTCTTACAGAGACTTCGGGGCTGGGCTCTATGGTGGT  1099

seq1  TTCTTCATTCTGACCACAGGCTGTTTCTAGCCCTTTGTGAATTC  1126
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATTCTGACCACAGGCTGTTTCTAGCCCTTTGTGAATTC  1143

seq1: chr5_115350245_115350799
seq2: B6Ng01-184P21.g_65_619

seq1  GAATTCCTACCCACCCTCTGGAAAACACCAGGTTAGGCAAACATTCCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACCCACCCTCTGGAAAACACCAGGTTAGGCAAACATTCCAAG  50

seq1  GTCTTTAGGGTCCAACAGAACTGTATTAGACCCTTTAAAACAAGGCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAGGGTCCAACAGAACTGTATTAGACCCTTTAAAACAAGGCTCTC  100

seq1  AAGCTGGGTGGTGATGGAGCAAGCCTTTATTCCCAGCACTTGGAAAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGGTGGTGATGGAGCAAGCCTTTATTCCCAGCACTTGGAAAGCAG  150

seq1  AGGCAGGTGGATCTTTGTGAGTTTGAGACCAGCCTGGTCTACAGAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGTGGATCTTTGTGAGTTTGAGACCAGCCTGGTCTACAGAGCAAG  200

seq1  TTCCAGGACAGTCAGGGCTACACAGAGAAACCCTGTCTCAAAAAGTAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGACAGTCAGGGCTACACAGAGAAACCCTGTCTCAAAAAGTAAGT  250

seq1  AAGTAAATGAAATAAATAAGCAAACAAATAAATAACAAGACTCTCGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATGAAATAAATAAGCAAACAAATAAATAACAAGACTCTCGTATT  300

seq1  TTACAACTTGTATTCCTCTTGGGCCCACACCTTAGCATGCTCAAAATCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACTTGTATTCCTCTTGGGCCCACACCTTAGCATGCTCAAAATCGA  350

seq1  GCATACTAACTTACTACATGGGATAATGTTGAGTCATCAGAACTGATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTAACTTACTACATGGGATAATGTTGAGTCATCAGAACTGATATT  400

seq1  TGCTCACATTTGAGATACCAGACGGCGATTGCCTGTGCTTGCCTTTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACATTTGAGATACCAGACGGCGATTGCCTGTGCTTGCCTTTAAGT  450

seq1  TTACCTCCTTAATGGAGCCGATCTGAGGATTTCATGAGCCTGAAGGTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCCTTAATGGAGCCGATCTGAGGATTTCATGAGCCTGAAGGTCTA  500

seq1  CCTGACCATCCCGGCCTCTATTAATTTAGCTTTGAGGTGGGGGAGGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCATCCCGGCCTCTATTAATTTAGCTTTGAGGTGGGGGAGGGGGC  550

seq1  GAGGT  555
      |||||
seq2  GAGGT  555