BAC Information

Click to search

BAC

Clone NameB6Ng01-185D23
Chromosome5 (Build37)
Map Location 32,643,979 - 32,770,354
singlet/doubletdoublet
Overlap genePlb1, EG665350, LOC545743, Ppp1cb
Upstream geneZfp512, 4930548H24Rik, Xab1, Supt7l, Slc4a1ap, Mrpl33, Rbks, LOC100040000, Bre, Fosl2, LOC672217
Downstream geneLOC634553, LOC675983, Yes1, LOC100039775, Pisd, C330019G07Rik, LOC100040141, Depdc5, Ywhah, LOC100040169, Slc5a1, Spon2, Ctbp1, Maea, 4933407H18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185D23.bB6Ng01-185D23.g
ACCGA010411GA010412
length4701,122
definitionB6Ng01-185D23.b B6Ng01-185D23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,643,979 - 32,644,454)(32,769,242 - 32,770,354)
sequence
actgttttctcttctactttgtggctgctggctccattcaaacatagata
ggtcaggaaaggaaaggctgtgcttgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtaagcagaagcccacttctctccgatttcc
ttttccacacctcccgataaccactcctgcccatctgggaacggctccag
tggcatatctctaggtccttggctgattcttcctaggtgtactttgtccg
catgtgagtgatgacccttctcttctcccccctgacttacaactggggca
atgacttcctgtgcacagagaagagcccttccagccaggtacccacctca
ggtaagtggaagcagcacacctcctaccctgaatcccacaatgggtgcca
cacctgaaggtgtacctggatcattgagtggaccttgcttgttccaatgc
atggcacatctatatgctag
gaattccattccagtaattacataaacccaaactgtacttaaccacttta
gtacaatttttatgtgaaaattttctactacagtcttttgaactaagaaa
gatgtgtgatgtatcttcatgcatcctgtatgcacactagagtttatctt
tcactgtcacctgtactttctccaatttactctaacagaaaaaaacaaca
ggaaaataaaaggaaccaattctatacctttgcaggtgtgcctcacgaaa
tcttagatatttccatctcatttacgacccacctcccctcatcaccccat
cactgactaatgtcagctactctagagtacctaaattctgtataggcaat
tcttctatatcgagtacaaaagtctattagcaacaagagcaaaagtaaca
cttttagtgtttttcatgaattctcaaagggatctgtgatacactctaag
taatactcccctcccccacccacacactggcaaacaaaacaggtggtgta
gcatgaagaatggaagatgttgatgaacaggctgggatgctgctgctcag
gaataaagaagtatccagttcaaagtaagaactcctcttgtgctgacatt
gaaggaacactctacacactctgatacacacacctgaccagaggtatcaa
actactaggaatctagtgtgttcactgccatgcaattctgtaaaatactg
agataaaaacagtaaaaatgatcaattacacctagctcctgaaattatat
ctttgtctatacaagaaaatgcaaagtatccagacgtatacctactgcat
acaacacagtaattgcctcaaaggaaaatacatgactgaaaactgttgtt
accagacttacataattaacaaatagtctcaaatcaaacaaaatcatttt
caaagaaaacagtactttgtaggcaatgatgaagttcaagaatttcagga
aaccttggtctcctctaataccttccttcccaattcttaaagtctcttct
tgtgtttagcaaatttgtatcttatatcttgggtatcctaggtttggggc
taatatccacttatcagtgagtacaatatgtgtgagtcttgtgatggtgg
ttaccttcactcagggatgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_32643979_32644454
seq2: B6Ng01-185D23.b_44_519

seq1  GAATTCACTGTTTTCTCTTCTACTTTGTGGCTGCTGGCTCCATTCAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTTTTCTCTTCTACTTTGTGGCTGCTGGCTCCATTCAAACA  50

seq1  TAGATAGGTCAGGAAAGGAAAGGCTGTGCTTGTGTGTGTGTGTGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGGTCAGGAAAGGAAAGGCTGTGCTTGTGTGTGTGTGTGTGTGTG  100

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCAGAAGCCCACTTCTCTCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCAGAAGCCCACTTCTCTCCG  150

seq1  ATTTCCTTTTCCACACCTCCCGATAACCACTCCTGCCCATCTGGGAACGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTTTCCACACCTCCCGATAACCACTCCTGCCCATCTGGGAACGG  200

seq1  CTCCAGTGGCATATCTCTAGGTCCTTGGCTGATTCTTCCTAGGTGTACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTGGCATATCTCTAGGTCCTTGGCTGATTCTTCCTAGGTGTACTT  250

seq1  TGTCCGCATGTGAGTGATGACCCTTATCTTCTCCCCCCTGACTTAGAACT  300
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  TGTCCGCATGTGAGTGATGACCCTTCTCTTCTCCCCCCTGACTTACAACT  300

seq1  GGGGCAGTGACTTCCTGTGCACAGAGAAGAGCCCTTCCAGCCAGGTACCC  350
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAATGACTTCCTGTGCACAGAGAAGAGCCCTTCCAGCCAGGTACCC  350

seq1  ACCTCAGGTAAGTGGAAGCAGCACACCTCCTACGCTGAATCCCACACTGG  400
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  ACCTCAGGTAAGTGGAAGCAGCACACCTCCTACCCTGAATCCCACAATGG  400

seq1  GTGCCAGACCTGTAGGTGTACCTGGAGCATTGAGTGGACCTTGCTGGTTC  450
      |||||| ||||| ||||||||||||| |||||||||||||||||| ||||
seq2  GTGCCACACCTGAAGGTGTACCTGGATCATTGAGTGGACCTTGCTTGTTC  450

seq1  CAATGCATGGCAGAGCTAGATGCTAG  476
      |||||||||||| | ||| |||||||
seq2  CAATGCATGGCACATCTATATGCTAG  476

seq1: chr5_32769242_32770354
seq2: B6Ng01-185D23.g_68_1189 (reverse)

seq1  CATCAT-CCTGAGTG-AGGTAA-CACATTCACAAAGGAACTCACACAATA  47
      |||||| |||||||| |||||| |||  ||||||    |||||||||   
seq2  CATCATCCCTGAGTGAAGGTAACCACCATCACAA---GACTCACACATAT  47

seq1  TGTACTCACTGATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGAT  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCACTGATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGAT  97

seq1  ATAAGATAC-AATTTGCTAAACAC-AGAAGAGACTTTAAGAA-TGGGA--  142
      ||||||||| |||||||||||||| ||||||||||||||||| |||||  
seq2  ATAAGATACAAATTTGCTAAACACAAGAAGAGACTTTAAGAATTGGGAAG  147

seq1  GGAGGTATTAGAGGAGA-CAAGGTTTCCTGAAA-TCTTGAACTTCATCAT  190
      | ||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  GAAGGTATTAGAGGAGACCAAGGTTTCCTGAAATTCTTGAACTTCATCAT  197

seq1  TGCCTAC-AAGTACTGTTTTCTTTG-AAATGATTTTGTTTGATTTGAGAC  238
      ||||||| ||||||||||||||||| ||||||||||||||||||||||||
seq2  TGCCTACAAAGTACTGTTTTCTTTGAAAATGATTTTGTTTGATTTGAGAC  247

seq1  TATTTGTTAATTATGTAAGTCTGGTAACAACAGTTTTCAGTCATGTATTT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTAATTATGTAAGTCTGGTAACAACAGTTTTCAGTCATGTATTT  297

seq1  TCCTTTGAGGCAATTACTGTGTTGTATGCAGTAGGTATACGTCTGGATAC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGAGGCAATTACTGTGTTGTATGCAGTAGGTATACGTCTGGATAC  347

seq1  TTTGCATTTTCTTGTATAGACAAAGATATAATTTCAGGAGCTAGGTGTAA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTTTCTTGTATAGACAAAGATATAATTTCAGGAGCTAGGTGTAA  397

seq1  TTGATCATTTTTACTGTTTTTATCTCAGTATTTTACAGAATTGCATGGCA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCATTTTTACTGTTTTTATCTCAGTATTTTACAGAATTGCATGGCA  447

seq1  GTGAACACACTAGATTCCTAGTAGTTTGATACCTCTGGTCAGGTGTGTGT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACACACTAGATTCCTAGTAGTTTGATACCTCTGGTCAGGTGTGTGT  497

seq1  ATCAGAGTGTGTAGAGTGTTCCTTCAATGTCAGCACAAGAGGAGTTCTTA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTGTGTAGAGTGTTCCTTCAATGTCAGCACAAGAGGAGTTCTTA  547

seq1  CTTTGAACTGGATACTTCTTTATTCCTGAGCAGCAGCATCCCAGCCTGTT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACTGGATACTTCTTTATTCCTGAGCAGCAGCATCCCAGCCTGTT  597

seq1  CATCAACATCTTCCATTCTTCATGCTACACCACCTGTTTTGTTTGCCAGT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACATCTTCCATTCTTCATGCTACACCACCTGTTTTGTTTGCCAGT  647

seq1  GTGTGGGTGGGGGAGGGGAGTATTACTTAGAGTGTATCACAGATCCCTTT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGTGGGGGAGGGGAGTATTACTTAGAGTGTATCACAGATCCCTTT  697

seq1  GAGAATTCATGAAAAACACTAAAAGTGTTACTTTTGCTCTTGTTGCTAAT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCATGAAAAACACTAAAAGTGTTACTTTTGCTCTTGTTGCTAAT  747

seq1  AGACTTTTGTACTCGATATAGAAGAATTGCCTATACAGAATTTAGGTACT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTGTACTCGATATAGAAGAATTGCCTATACAGAATTTAGGTACT  797

seq1  CTAGAGTAGCTGACATTAGTCAGTGATGGGGTGATGAGGGGAGGTGGGTC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTAGCTGACATTAGTCAGTGATGGGGTGATGAGGGGAGGTGGGTC  847

seq1  GTAAATGAGATGGAAATATCTAAGATTTCGTGAGGCACACCTGCAAAGGT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAGATGGAAATATCTAAGATTTCGTGAGGCACACCTGCAAAGGT  897

seq1  ATAGAATTGGTTCCTTTTATTTTCCTGTTGTTTTTTTCTGTTAGAGTAAA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATTGGTTCCTTTTATTTTCCTGTTGTTTTTTTCTGTTAGAGTAAA  947

seq1  TTGGAGAAAGTACAGGTGACAGTGAAAGATAAACTCTAGTGTGCATACAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAAAGTACAGGTGACAGTGAAAGATAAACTCTAGTGTGCATACAG  997

seq1  GATGCATGAAGATACATCACACATCTTTCTTAGTTCAAAAGACTGTAGTA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATGAAGATACATCACACATCTTTCTTAGTTCAAAAGACTGTAGTA  1047

seq1  GAAAATTTTCACATAAAAATTGTACTAAAGTGGTTAAGTACAGTTTGGGT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTTCACATAAAAATTGTACTAAAGTGGTTAAGTACAGTTTGGGT  1097

seq1  TTATGTAATTACTGGAATGGAATTC  1113
      |||||||||||||||||||||||||
seq2  TTATGTAATTACTGGAATGGAATTC  1122