BAC Information

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BAC

Clone NameB6Ng01-186K03
Chromosome5 (Build37)
Map Location 7,708,355 - 7,709,386
singlet/doubletsinglet
Overlap genenone
Upstream geneEG435830, LOC100042651, 4921511H03Rik, LOC242823
Downstream geneLOC667767, EG546855, Steap4, Sri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186K03.bB6Ng01-186K03.g
ACCGA011421GA011422
length1,0361,101
definitionB6Ng01-186K03.b B6Ng01-186K03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctttgccaaagaaaatagtg
aatcaaaaacagtatcgcattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaggt
gaaagataagttattgcacctggcccctcctacaaccaagaaagaagcac
aacgtttagtgggtctatttggattctggaatcaacacatccctcacttg
ggtgtgttacttaggcctatttaccaagtgactcggaaagctgctagctt
tgtgtggggctgaacaggagaaggccttcaacaagttcaggctgcctgtg
caggctgctctacactttggaccatatgacccagcagacccgatggtact
tgagtgtctgtgctgaatgagatgctggtttgaagc
gaattcttgatagaacaaataagagtgaataagaaatacttttaaaaatg
ttcactgtccttagcaattaggggaattcaaattaaatatttttaaaatt
tttatttattcgctttgtttttttttgcactccagattttatccccctcc
tggtccacactttagctgttccccatcccatacctctccccacccctcat
cttcatgaggatgtccccaccccctcccccctccccaccagacctcccaa
ctccctggggcctccagcctcttgaggactaggtgcatcttctctgactg
aacccagacccagcagtcctctgctgtatatgtattgtgagcctcatgtc
agctggtgtatgctgcctggttagtgttccagtgtctgcgagatctcggg
ggtccaggttaattgagacttctggtccttctacagggtcgccctcttcc
tcagctttttccagcttttccctaattcaaccacaggggtcagcagcttc
tgtccacgggttgggtgtaaatatctgcaattgactctttcaactgcttg
ttgcatcttatattcaaaatacattatatgagttttcttttaaaaaaatt
tgggagctggagagatggctcagtgtttaagagaactggatgctcttcca
gaggtcctgagttcaattctcagcaacttcatggtggcttaaaacaatct
ataatgggatctgatgctgtccctggcgtgcaccatatatatacacacag
cactcatgaataattaatacaaattaaaaaatgatcatttgaaaatttct
taagcaatgtcatcttcatagtcaaagattttagaaataaatgagtattt
agtaataaaatatttatgaatattaaacaatttgagtttctacaaaaaac
agtaccttaaatacatataacatagatacatacttttaatacccagaaaa
attttgtcatgttttaaagttcttttttcctggattctcaaaagaaaggt
atgtgggaaaagtgtgcagattccaaaatttgtggtttacatcctaagca
caaagggctctagtgggctggagacttctgtacttcgggtcttccagttg
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7708355_7709386
seq2: B6Ng01-186K03.g_123_1163 (reverse)

seq1  GCAACT-GAAGACCCCGAGTACAGAAGTCT-CAACCCACTAGAGCCCTTT  48
      |||||| ||||||||  ||||||||||||| || ||||||||||||||||
seq2  GCAACTGGAAGACCCGAAGTACAGAAGTCTCCAGCCCACTAGAGCCCTTT  50

seq1  GTGCTTTAGATGT-AACCAC-AATTTTGGAATCTGCACACTTTTCCCACA  96
      ||||||  ||||| |||||| |||||||||||||||||||||||||||||
seq2  GTGCTTAGGATGTAAACCACAAATTTTGGAATCTGCACACTTTTCCCACA  100

seq1  TACCTTTC-TTTGAGAATCCAGGAAAAA--GACTTTAAAACATGACAAAA  143
      |||||||| |||||||||||||||||||   |||||||||||||||||||
seq2  TACCTTTCTTTTGAGAATCCAGGAAAAAAGAACTTTAAAACATGACAAAA  150

seq1  -TTTTCTGGGTATTAAAAGTATGTATCTATGTTATATGTATTTAAGGTAC  192
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGGGTATTAAAAGTATGTATCTATGTTATATGTATTTAAGGTAC  200

seq1  TGTTTTTTGTAGAAACTCAAATTG-TTAATATTCATAAATATTTTATTAC  241
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTTTTTTGTAGAAACTCAAATTGTTTAATATTCATAAATATTTTATTAC  250

seq1  TAAATACTCATTTATTTCTAAAATCTTTGACTATGAAGATGACATTGCTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACTCATTTATTTCTAAAATCTTTGACTATGAAGATGACATTGCTT  300

seq1  AAGAAATTTTCAAATGATCATTTTTTAATTTGTATTAATTATTCATGAGT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTTTCAAATGATCATTTTTTAATTTGTATTAATTATTCATGAGT  350

seq1  GCTGTGTGTATATATATGGTGCACGCCAGGGACAGCATCAGATCCCATTA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGTATATATATGGTGCACGCCAGGGACAGCATCAGATCCCATTA  400

seq1  TAGATTGTTTTAAGCCACCATGAAGTTGCTGAGAATTGAACTCAGGACCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGTTTTAAGCCACCATGAAGTTGCTGAGAATTGAACTCAGGACCT  450

seq1  CTGGAAGAGCATCCAGTTCTCTTAAACACTGAGCCATCTCTCCAGCTCCC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAGCATCCAGTTCTCTTAAACACTGAGCCATCTCTCCAGCTCCC  500

seq1  AAATTTTTTTAAAAGAAAACTCATATAATGTATTTTGAATATAAGATGCA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTTTAAAAGAAAACTCATATAATGTATTTTGAATATAAGATGCA  550

seq1  ACAAGCAGTTGAAAGAGTCAATTGCAGATATTTACACCCAACCCGTGGAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAGTTGAAAGAGTCAATTGCAGATATTTACACCCAACCCGTGGAC  600

seq1  AGAAGCTGCTGACCCCTGTGGTTGAATTAGGGAAAAGCTGGAAAAAGCTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGCTGACCCCTGTGGTTGAATTAGGGAAAAGCTGGAAAAAGCTG  650

seq1  AGGAAGAGGGCGACCCTGTAGAAGGACCAGAAGTCTCAATTAACCTGGAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGGGCGACCCTGTAGAAGGACCAGAAGTCTCAATTAACCTGGAC  700

seq1  CCCCGAGATCTCGCAGACACTGGAACACTAACCAGGCAGCATACACCAGC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGAGATCTCGCAGACACTGGAACACTAACCAGGCAGCATACACCAGC  750

seq1  TGACATGAGGCTCACAATACATATACAGCAGAGGACTGCTGGGTCTGGGT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGAGGCTCACAATACATATACAGCAGAGGACTGCTGGGTCTGGGT  800

seq1  TCAGTCAGAGAAGATGCACCTAGTCCTCAAGAGGCTGGAGGCCCCAGGGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAGAGAAGATGCACCTAGTCCTCAAGAGGCTGGAGGCCCCAGGGA  850

seq1  GTTGGGAGGTCTGGTGGGGAGGGGGGAGGGGGTGGGGACATCCTCATGAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGAGGTCTGGTGGGGAGGGGGGAGGGGGTGGGGACATCCTCATGAA  900

seq1  GATGAGGGGTGGGGAGAGGTATGGGATGGGGAACAGCTAAAGTGTGGACC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGGGTGGGGAGAGGTATGGGATGGGGAACAGCTAAAGTGTGGACC  950

seq1  AGGAGGGGGATAAAATCTGGAGTGCAAAAAAAAACAAAGCGAATAAATAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGGGATAAAATCTGGAGTGCAAAAAAAAACAAAGCGAATAAATAA  1000

seq1  AAATTTTAAAAATATTTAATTTGAATTCCCCTAATTGCTAA  1032
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAAAAATATTTAATTTGAATTCCCCTAATTGCTAA  1041