BAC Information

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BAC

Clone NameB6Ng01-186L14
Chromosome5 (Build37)
Map Location 140,843,816 - 140,844,374
singlet/doubletsinglet
Overlap geneSnx8
Upstream gene3110082I17Rik, D830046C22Rik, Gpr146, C130050O18Rik, Gpr30, Zfand2a, Uncx4.1, LOC100041200, LOC100041209, LOC100041217, Micall2, Ints1, Mafk, BC019731, 1810042K04Rik, A930017N06Rik, LOC100041270, Mad1l1, Ftsj2, Nudt1
Downstream geneEif3s9, LOC100041291, EG231836, Chst12, Grifin, Lfng, Ttyh3, Iqce, AA881470, 6530401C20Rik, Gna12, Card11, LOC623466
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186L14.bB6Ng01-186L14.g
ACCGA011491GA011492
length295554
definitionB6Ng01-186L14.b B6Ng01-186L14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcacagttacacgcttttgttatgcaaaccttgtttcttgattgaaaact
cttgactaaggcctgaagagaaggctcagaagttaaaagtactgactgct
cttgcagaggtcctgagttcaaatcccggcaaccacatggtggctcacaa
ccatctgtaatgggatctgatgccttcttctggtgtgtctgaagacagcg
acagtgtactcatataaataaaagtaatgtctttctaaagtattggttaa
ataaaattggtaactggagggattagaggtaggtgggttttgagt
ttgcagtccctccagcgtcccctagacaggtcctatcaacttcacgtgct
ccctgctttgaccattctggaacaaactgctttcctgtggggttctcagc
tggcagcagtgcgcctcagaattaaacgacacagcggagctgagaacagc
tggtgagaatagaacactcaataggcatcaccgacttccttccagattca
ttactctccagtcgtgaggccaccaacaaaaactgaatatgttccaccag
aagccatgactggtggtacagcctgcatgtgaggtgaactgcttgggaag
aagctcaatcagaaagatcacaagttcaaggccaatcctatctcagaaag
taaaaatgtagctctggtagaatgcttgctagaggacagggaggggctgg
gggtgtggctcagtggtagagcccctgcctagaatcccccagggaggggc
tgggggtgtggctcaggggtagaacccctgcctagaatcccctagggagg
ggctgggggcgtggctcagtggtagagctccttgcctaaaatcccccatt
gaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_140843816_140844374
seq2: B6Ng01-186L14.g_64_623

seq1  GAATTCTTGCAGTCCCTCCAGCGTCCCCTAGACAGGTCCTATCAACTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCAGTCCCTCCAGCGTCCCCTAGACAGGTCCTATCAACTTCA  50

seq1  CGTGCTCCCTGCTTTGACCATTCTGGAACAAACTGCTTTCCTGTGGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCTCCCTGCTTTGACCATTCTGGAACAAACTGCTTTCCTGTGGGGTT  100

seq1  CTCAGCTGGCAGCAGTGCGCCTCAGAATTAAACGACACAGCGGAGCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGGCAGCAGTGCGCCTCAGAATTAAACGACACAGCGGAGCTGAG  150

seq1  AACAGCTGGTGAGAATAGAACACTCAATAGGCATCACCGACTTCCTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTGGTGAGAATAGAACACTCAATAGGCATCACCGACTTCCTTCCA  200

seq1  GATTCATTACTCTCCAGTCGTGAGGCCACCAACAAAAACTGAATATGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATTACTCTCCAGTCGTGAGGCCACCAACAAAAACTGAATATGTTC  250

seq1  CACCAGAAGCCATGACTGGTGGTACAGCCTGCATGTGAGGTGAACTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAGCCATGACTGGTGGTACAGCCTGCATGTGAGGTGAACTGCTT  300

seq1  GGGAAGAAGCTCAATCAGAAAGATCACAAGTTCAAGGCCAATCCTATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAAGCTCAATCAGAAAGATCACAAGTTCAAGGCCAATCCTATCTC  350

seq1  AGAAAGTAAAAATGTAGCTCTGGTAGAATGCTTGCTAGAGGACAGGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTAAAAATGTAGCTCTGGTAGAATGCTTGCTAGAGGACAGGGAGG  400

seq1  GGCTGGGGGTGTGGCTCAGTGGTAGAGCCCCTGCCTAGAATCCCCCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGGGTGTGGCTCAGTGGTAGAGCCCCTGCCTAGAATCCCCCAGGG  450

seq1  AGGGGCTGGGGGTGTGGCTCAGGGGTAGAACCCCTGCCTAGAATCCCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTGGGGGTGTGGCTCAGGGGTAGAACCCCTGCCTAGAATCCCCTA  500

seq1  GGGAGGGGCTGGGGGCGTGGCTCAGTGGTAGAGCTCC-TGCCTAGAATCC  549
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  GGGAGGGGCTGGGGGCGTGGCTCAGTGGTAGAGCTCCTTGCCTAAAATCC  550

seq1  CCCAGTGAGA  559
      |||| |||||
seq2  CCCATTGAGA  560