BAC Information

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BAC

Clone NameB6Ng01-186L24
Chromosome5 (Build37)
Map Location 14,838,088 - 14,838,810
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668085, LOC384149, LOC384148, Sema3e, LOC100042957, Pclo
Downstream geneENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d, 4930572O03Rik, Speer7-ps1, 4930519H02Rik, LOC100041781, Cacna2d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186L24.bB6Ng01-186L24.g
ACCGA011511GA011512
length1,197985
definitionB6Ng01-186L24.b B6Ng01-186L24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaccagaggactcctaaacctgatgaacaacttcagcaaagtgg
ctggatataaaattaacttaaaaaaatcagtagactttctctacttaagg
acaaataggctgagaaagaaattacggaaatggcacccttcacaatagtc
acaaataatattagataccttggtgtgactctaaccaagcaagtgaaaga
tctgtatgacaagaatttcaagtctctgaagaaagaaatttaacagaagg
tggaaagatctcccatgctcatggattgacaggatgaatataataaaatt
ggccatcttgccaaaagcaatctacagattcaatgcaatccccattaaaa
ttccaactcaattcttcatagaattagaaacagcaatttgcaaattcatt
tggaataaaaaaaaatctaggaaagcaaaaactattctcaacaaaagaac
ttctggggaaatcaccatccctaacctcaagctgtattacagagcaatag
tgataaaaactttatggtattggtacagagaggcaggaaagatcagtgga
atagaattgaagacccagaaatgaacttacacacctctggtcacttgatc
tttgacaaaggaagtaaacccattcagttggaaaaaaaccgcattttcaa
caaatggtgctggttcaactggcagttatcatgtagaagaaggcaaatgg
atccattcttatctccttgtacaaagcttatgtccaagtggatcaagaac
cgccatataaaaccagattcactgaaactaataaaagagaatgtggggaa
tagccttgaacacatgggcatgggggggaaatttcctgaacagaacaaaa
atggcttatgctgaaagattaaaaatcaaaaaatgggacctcattaaact
gcaaagcttctctaaaggcaaagaaaactgtcaataagacaaaaagggca
tcaacagattgggaaaagatctttatcaatccttcatcctatagagggct
aatatccaatatataaaaagaactcatgagttagactcctgagacctaaa
ttatcctataaaatgggggatcagacctaaacagagagttttactggaga
aacttgattggccgataggcacctaaagaaatgtcacatcatagtcatca
gggaaacccaatcgaattgaaccttgaagaagtgctccacccctcca
gaattcacgcagttgaatccttctcaacagtctgttttacgggaacactt
cattaccataacccgcagttctggttccggaatgagggatcttccttgcg
ccggtgaaactcccgtcccgagtttttcttcccgggttttctcgtcccag
gttctttcttcccgggttttttctcgtcccggaatttctcgtcccgtccc
gggtttcggcaccaattgttattagacacgttctcacgaccggccaggaa
agacgcaacaaaccagaatcttctgcggcaaagctttattgcttacatct
tcaggagccagagtgcaagagagcaagcaagcaaatggcgaaaccccatc
cctttttaaggagaattatcctccacctaggatgtattactccctgattg
gctgcagcccatcggcccagttgtcatcacgggaaaggcagaacacatgg
tgggaaaactgcccctgcatgtgtgcagactatgtttaccacttagaaca
cagctgtcagtgccatcttataatggcaaatgtgagggcggctcctcaca
ggtaacactgtaaactctagtgaagtgactttttaaagatgaatgtgtgt
gtgtgtgtagataaatagatgtatattcataagtatataaattgtgtgta
attttatagaaatataaaataataagattaattggaactttttcaaacaa
ccttagtattattctttccttcccctctccttatgtgttgaccttccttt
ccctgttgtttgaaccctcctcctcttcattcttccatatttgggttcat
gtcagaaactgtatcctgttatttttctctcagctctcccactcaccagc
ttcctgtcatgcccaggcattgtttttcttcaggctttgggggaattatt
gaaatttttaaacatttaaaaagtatgtccacttatgtccttatttttct
gcctgtgaaataatctggtctttgatgtctcatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_14838088_14838810
seq2: B6Ng01-186L24.g_322_1049

seq1  ACAAACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAGGAG  50

seq1  CCAGAGTGCAAGAGAGCAAGCAAGCAAATGGCGAAACCCCATCCCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTGCAAGAGAGCAAGCAAGCAAATGGCGAAACCCCATCCCTTTTT  100

seq1  AAGGAGAATTATCCTCCACCTAGGATGTATTACTCCCTGATTGGCTGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAATTATCCTCCACCTAGGATGTATTACTCCCTGATTGGCTGCAG  150

seq1  CCCATCGGCCCAGTTGTCATCACGGGAAAGGCAGAACACATGGTGGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCGGCCCAGTTGTCATCACGGGAAAGGCAGAACACATGGTGGGAAA  200

seq1  ACTGCCCCTGCATGTGTGCAGACTATGTTTACCACTTAGAACACAGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCCTGCATGTGTGCAGACTATGTTTACCACTTAGAACACAGCTGT  250

seq1  CAGTGCCATCTTATAATGGCAAATGTGAGGGCGGCTCCTCACAGGTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCATCTTATAATGGCAAATGTGAGGGCGGCTCCTCACAGGTAACA  300

seq1  CTGTAAACTCTAGTGAAGTGACTTTTTAAAGATGAATGTGTGTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAACTCTAGTGAAGTGACTTTTTAAAGATGAATGTGTGTGTGTGTG  350

seq1  TAGATAAATAGATGTATATTCATAAGTATATAAATTGTGTGTAATTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAATAGATGTATATTCATAAGTATATAAATTGTGTGTAATTTTAT  400

seq1  AGAAATATAAAATAATAAGATTAATTGGAACTTTTTCAAACAACCTTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATAAAATAATAAGATTAATTGGAACTTTTTCAAACAACCTTAGT  450

seq1  ATTATTC-TTCCTTCCCCTCTCCTTATGTGTTGACCTTCC-TTCCCTGTT  498
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  ATTATTCTTTCCTTCCCCTCTCCTTATGTGTTGACCTTCCTTTCCCTGTT  500

seq1  GTTTGAACCCTCCTCCTCTTCATTCTTCCATATTTGGGTTCATGTCAG-A  547
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTTTGAACCCTCCTCCTCTTCATTCTTCCATATTTGGGTTCATGTCAGAA  550

seq1  ACTGTATCCTGTTA-TTTTCTCTCAGCTCTCCCACTCACCAGCTTTCTGT  596
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  ACTGTATCCTGTTATTTTTCTCTCAGCTCTCCCACTCACCAGCTTCCTGT  600

seq1  CATGCCCAGGCATTG-TTTTCTTCAGGCTTT-GGGGAATTATTTGAATTT  644
      ||||||||||||||| ||||||||||||||| |||||||||||  |||||
seq2  CATGCCCAGGCATTGTTTTTCTTCAGGCTTTGGGGGAATTATTGAAATTT  650

seq1  TTAAACATTTAAAAAGTATGTCCACTTATGTTCTTAATTTTTCGTCTTGT  694
      ||||||||||||||||||||||||||||||| ||| |||||||  | |||
seq2  TTAAACATTTAAAAAGTATGTCCACTTATGTCCTT-ATTTTTCTGCCTGT  699

seq1  GAAATTATCTGGTCTTTGTTGTCTCATAC  723
      ||||| |||||||||||| ||||||||||
seq2  GAAATAATCTGGTCTTTGATGTCTCATAC  728