BAC Information

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BAC

Clone NameB6Ng01-186P10
Chromosome5 (Build37)
Map Location 46,518,781 - 46,519,890
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040737, Qdpr, EG624224, Lap3, LOC100040762, Med28, 9630031F12Rik, 9630001P10Rik, 1600023N17Rik, Lcorl, LOC100041576
Downstream geneEG666103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186P10.bB6Ng01-186P10.g
ACCGA011669GA011670
length1,2101,102
definitionB6Ng01-186P10.b B6Ng01-186P10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatcaatgtaatccattatataaacaaactcaaagacaaaaacg
acatgatcatctcggtagatgcagaaaaagcatttgacaagatccaacac
ccattcatgataaaagttctggaaagatggggaattcaaggcccatacct
aaacatgataaaagcaatctacagcaaaccagtagccaacatcaaagtaa
atggagagaagctggaagcaatcccactaaaatcagggactagacaaggc
tgcccactttctccctaccttttcaacatagtacttgaagtattagccag
agcaattcgacaacaaaaggagatcaaggggatacaaattggaaaagagg
aagtcaaaatatcactttttgcagatgatatgatagtatatataagtgac
cccaaaaattccaccagagaactcctaaacctgataaacagcttcagtga
agtagctggatataaaataaactcaaacaagtcaatggcctttctctata
caaagaataaacaggctgagaaagaaattatggaaacaacacccttctca
atagtcacaaataatataaaatatctcggcgtgactctaactaaggaagt
gaaagatctgtatgataaaaacttcaagtctctgaagaaagaaattaaag
aagatctcagaagatggaaggatctcccatgctcatggattggcaggatc
aacattgtaaaaatggctatcttgccaaaagcaatctacagattcaatgc
aatccccatcaaaattccaactcaattcttcaacgaattagaaggagcaa
tttgcaaattcatctggaataacaaaaaaccgaggatagcaaaaactctt
ctcaagggataaaagaacctctggtggaatcaccacgtctgacctaaagc
tttactacagagcaattgtgataaaactgcatggtactggtattagagac
agacaagtagaccaatggaataggatttgaagacccagaaatgaacccac
acacctatggtcacttgatcttcgacagggagcttaaaccatccagtgga
agaaagacagcattttcaacattgtgctggcacactggttgttatcatgt
agaagatgcgaatcgatccatactatctcttgtactaagggtcaattcta
tgatcaggacctttcacttatccagagaacactgatctatagaggtgaaa
tagtgtgtgg
gaattcagatccctagagcccatataaaaaccagacatggtgatgcccat
ctgcaatcctaatactggaagatggaaagagaggatcccagggactccgt
ggcaagccagtctaggtcattagtaagctccatgttcaataagaaattct
ctctcaaaaaataaagtgaagagcaagagagagagacacctgatattgac
ctctagcttctacacgtgtacatatctacagactccttatatcatatgaa
agaagtaaatgtattaaaattcaaactggacaagaacttaataaacactt
ttaaaatgtatttcatatattacataacatgcatatttatttacttataa
ttaagaaatatataaaatccattaatgtaactgttttctaaaatgtattt
tatggaacagatgtgttgtgatttggaccacatatattaattccttattc
ataagacatatcctttatctttccaacctctgtccacatatttactcctg
aatgaaatttccttcccatcatgttcaaacatctgtataccctcttccag
aaagcttgcattaccaactgctttgaaaatccaagtgctgcaccttattt
ttctaagcagaacaactccaagagctgagggcacatctcagttctatgga
gtcttagaaggaaagttaagtcctaaaagaaatgcttattctaagccaaa
tgagaaactgcataccatctataagttgacccttgaaatataagagataa
tttcttggaaaagcaccaagggaatccagggatccataagcacaaagact
agcctacctacataaataggaaacccaggaatccataggcagaatggcta
gtcatattcaataagttgacaatggagaccagcatggctttctgatccct
gtacaatgatcctgtctgccacagaggttagttaagatgtgatgatcttg
cctgtgaaggactgagtaagagaaatttgtgtgctgacaatgtcagtagt
gccctagatttacagtgtggtagagtatggggttataggcatatatgttc
tcagagctgtcctcattccagtgataggcaagagccaaaatgacaggcct
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_46518781_46519890
seq2: B6Ng01-186P10.g_65_1166 (reverse)

seq1  TGAGGCCTGTCATTTTTGCTCCTTGCCTATTCACTGGGAATGAGGACAGC  50
      |||||||||||||||| ||| |||||||| ||||| ||||||||||||||
seq2  TGAGGCCTGTCATTTTGGCT-CTTGCCTA-TCACT-GGAATGAGGACAGC  47

seq1  TCTTGAGAAACATTATATGCTTATAACCCCATACTCTACCACACTGTTAA  100
      || |||| |||| ||||||| ||||||||||||||||||||||||| |||
seq2  TC-TGAG-AACA-TATATGCCTATAACCCCATACTCTACCACACTG-TAA  93

seq1  TTCTAGGGCCACTACTGACATTGTCAGCACACAAATTTCTCTTACTCAGT  150
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGG-CACTACTGACATTGTCAGCACACAAATTTCTCTTACTCAGT  142

seq1  TCTTCACAGGCAAGATCATCACATCTTAACTAACCTCTGTGGCAGACAGG  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACAGGCAAGATCATCACATCTTAACTAACCTCTGTGGCAGACAGG  192

seq1  ATCATTGTACAGGGATCAGAAAGCCATGCTGGTCTCCATTGTCAACTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTACAGGGATCAGAAAGCCATGCTGGTCTCCATTGTCAACTTAT  242

seq1  TGAATATGACTAGCCATTCTGCCTATGGATTCCTGGGTTTCCTATTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATGACTAGCCATTCTGCCTATGGATTCCTGGGTTTCCTATTTATG  292

seq1  TAGGTAGGCTAGTCTTTGTGCTTATGGATCCCTGGATTCCCTTGGTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGGCTAGTCTTTGTGCTTATGGATCCCTGGATTCCCTTGGTGCTT  342

seq1  TTCCAAGAAATTATCTCTTATATTTCAAGGGTCAACTTATAGATGGTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGAAATTATCTCTTATATTTCAAGGGTCAACTTATAGATGGTATG  392

seq1  CAGTTTCTCATTTGGCTTAGAATAAGCATTTCTTTTAGGACTTAACTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTCATTTGGCTTAGAATAAGCATTTCTTTTAGGACTTAACTTTC  442

seq1  CTTCTAAGACTCCATAGAACTGAGATGTGCCCTCAGCTCTTGGAGTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAGACTCCATAGAACTGAGATGTGCCCTCAGCTCTTGGAGTTGTT  492

seq1  CTGCTTAGAAAAATAAGGTGCAGCACTTGGATTTTCAAAGCAGTTGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAGAAAAATAAGGTGCAGCACTTGGATTTTCAAAGCAGTTGGTAA  542

seq1  TGCAAGCTTTCTGGAAGAGGGTATACAGATGTTTGAACATGATGGGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCTTTCTGGAAGAGGGTATACAGATGTTTGAACATGATGGGAAGG  592

seq1  AAATTTCATTCAGGAGTAAATATGTGGACAGAGGTTGGAAAGATAAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCATTCAGGAGTAAATATGTGGACAGAGGTTGGAAAGATAAAGGA  642

seq1  TATGTCTTATGAATAAGGAATTAATATATGTGGTCCAAATCACAACACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTATGAATAAGGAATTAATATATGTGGTCCAAATCACAACACAT  692

seq1  CTGTTCCATAAAATACATTTTAGAAAACAGTTACATTAATGGATTTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCATAAAATACATTTTAGAAAACAGTTACATTAATGGATTTTATA  742

seq1  TATTTCTTAATTATAAGTAAATAAATATGCATGTTATGTAATATATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTAATTATAAGTAAATAAATATGCATGTTATGTAATATATGAAA  792

seq1  TACATTTTAAAAGTGTTTATTAAGTTCTTGTCCAGTTTGAATTTTAATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTAAAAGTGTTTATTAAGTTCTTGTCCAGTTTGAATTTTAATAC  842

seq1  ATTTACTTCTTTCATATGATATAAGGAGTCTGTAGATATGTACACGTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTCTTTCATATGATATAAGGAGTCTGTAGATATGTACACGTGTA  892

seq1  GAAGCTAGAGGTCAATATCAGGTGTCTCTCTCTCTTGCTCTTCACTTTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAGAGGTCAATATCAGGTGTCTCTCTCTCTTGCTCTTCACTTTAT  942

seq1  TTTTTGAGAGAGAATTTCTTATTGAACATGGAGCTTACTAATGACCTAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGAGAGAATTTCTTATTGAACATGGAGCTTACTAATGACCTAGA  992

seq1  CTGGCTTGCCACGGAGTCCCTGGGATCCTCTCTTTCCATCTTCCAGTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGCCACGGAGTCCCTGGGATCCTCTCTTTCCATCTTCCAGTATT  1042

seq1  AGGATTGCAGATGGGCATCACCATGTCTGGTTTTTATATGGGCTCTAGGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGCAGATGGGCATCACCATGTCTGGTTTTTATATGGGCTCTAGGG  1092

seq1  ATCTGAATTC  1110
      ||||||||||
seq2  ATCTGAATTC  1102