BAC Information

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BAC

Clone NameB6Ng01-187K18
Chromosome5 (Build37)
Map Location 67,616,053 - 67,701,958
singlet/doubletdoublet
Overlap geneTmem33, Slc30a9
Upstream geneNsun7, Apbb2, Uchl1, LOC100041876, 3732412D22Rik, LOC624662, Phox2b
Downstream geneEG666938, C330024D21Rik, D830007B15Rik, Atp8a1, LOC100042458, EG330097, EG666977, AY616753
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187K18.bB6Ng01-187K18.g
ACCGA012184GA012185
length1,0241,121
definitionB6Ng01-187K18.b B6Ng01-187K18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,616,053 - 67,617,066)(67,700,851 - 67,701,958)
sequence
gaattctagagagaagctgtgcagtcctgacacccagcaagtgttacact
attccagttggagactaacagccgccctccacagtattctctaattcctg
cagagccacaaatacatacataaataaacacatgcatgcattcatacatg
catacatacatacatgaaatcatacaagaaagagaaagtcaggctgggga
gaaggcttgcccattatgagagcattctgctcttacagagaacctggttc
cagtcacaaaacccccagagagcagctcacaaccacctataactccagat
ccagagacccaaagccctcttctggactccatgggtacttgcattcacat
gtgcacacacacacacacacagacacacacacaatctaaaaaaaaaattt
ttttttaaattaaaaagcaaatatatctctggaaagcaagagagtacaat
gtagaatcctggattattatttgtcatttttaaactcccacaatgtttgt
tagttttcacacatgatctgaattggtcattggagccattttataagtga
aaggcaggtaatttttctgggtggtaggagttggttttgatttttggttt
cgagacaggaacatactatgtaaccctggcagagatctgcccgcctctgc
ccccagcacataggcaggtatttgatataccttctgccttctgtgtacga
caggaaattggttcccaaagagtaagtaagccaacttagcttgtagtcta
gagtaacacgcagacccccccggtctgcaatgtgtccatctacacactcc
ttgtactttgtccactggccccacccagaaaatgatgtcttcctgaagtc
tgtttgtcgcaggcactcatacactctctcagggaatagtccatcctttg
ctgcctctaaagaacacaaggagacttctagagcgtgacacttccctaac
ttccatctcatagagcacatccactgagggttcagagccttccccatgtc
catgaccctaggcctcttcgtaag
gaattcattaaaatcttaatggaaggctagagagatggctcagcagttaa
gagcactgactgctcttccaggggtcctgaactcaaatcccagcaaccac
atggtggctcacaacctcctgtaatggatccaatgctctcttctggtgtg
tctgaagacaggtacagtgcactcatataaataaaataaatcttaaaagg
aaaaaaaagatcttaatggggactgaagagatggcccagtggttaagaga
cttccagagacctgggttcaattcctcgcacccacaaggcagctaacgat
cttctgcaactccaattccagaggaccccatactctcttctggcttccat
gagcactgcacacatgtgatgcacaggtctacatgcaggcaaaacattca
tacatataaaaatgttaaaaccatgaactgattttaggagcgatcttatt
aacagcaccatcagattgtgacagtctgccaatatgaacactcaggagcc
ccagtttactggcatcccttctgccagccaatgctgcaggaaagcctgcc
tactcatctagccagcagaggtgtaagcaagatagagaggcccagcccag
gagaatgtgacctatatggttttagtacacagcataaagaaggccatctc
tcactttatttttttttaaaggcaacaaaagcacacactgacaactccct
gtgctacaacttggattatagctctactgtcttgcttagttactttcaat
atttgctaagaaaaagtaaaaatagctgcaattccaagacttagagatag
agacaggaggatcacaaaatggaggtcagcctaggttaaatgttaaaacc
ctgtctcaaaaagatgagaagggagataaaatcaataaaagcatctaaca
taatacaaatactataactacaaataaacttccaatgtatttagtaatga
actgagaatacacatttcagtatgtatttatttaattgtaaattaatttt
cattacaattgtcaggtcacaagggccacaacttcttaagtttcctttta
caccagagagaatactacctcaataaattcagtgtttcaattctgcctgg
ccaatcagtacaagagagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_67616053_67617066
seq2: B6Ng01-187K18.b_47_1070

seq1  GAATTCTAGAGAGAAGCTGTGCAGTCCTGACACCCAGCAAGTGTTACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAGAGAAGCTGTGCAGTCCTGACACCCAGCAAGTGTTACACT  50

seq1  ATTCCAGTTGGAGACTAACAGCCGCCCTCCACAGTATTCTCTAATTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGTTGGAGACTAACAGCCGCCCTCCACAGTATTCTCTAATTCCTG  100

seq1  CAGAGCCACAAATACATACATAAATAAACACATGCATGCATTCATACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCACAAATACATACATAAATAAACACATGCATGCATTCATACATG  150

seq1  CATACATACATACATGAAATCATACAAGAAAGAGAAAGTCAGGCTGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATACATACATGAAATCATACAAGAAAGAGAAAGTCAGGCTGGGGA  200

seq1  GAAGGCTTGCCCATTATGAGAGCATTCTGCTCTTACAGAGAACCTGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTGCCCATTATGAGAGCATTCTGCTCTTACAGAGAACCTGGTTC  250

seq1  CAGTCACAAAACCCCCAGAGAGCAGCTCACAACCACCTATAACTCCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACAAAACCCCCAGAGAGCAGCTCACAACCACCTATAACTCCAGAT  300

seq1  CCAGAGACCCAAAGCCCTCTTCTGGACTCCATGGGTACTTGCATTCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGACCCAAAGCCCTCTTCTGGACTCCATGGGTACTTGCATTCACAT  350

seq1  GTGCACACACACACACACACAGACACACACACAATCTAAAAAAAAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACACACACACACACAGACACACACACAATCTAAAAAAAAAATTT  400

seq1  TTTTTTAAATTAAAAAGCAAATATATCTCTGGAAAGCAAGAGAGTACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAATTAAAAAGCAAATATATCTCTGGAAAGCAAGAGAGTACAAT  450

seq1  GTAGAATCCTGGATTATTATTTGTCATTTTTAAACTCCCACAATGTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATCCTGGATTATTATTTGTCATTTTTAAACTCCCACAATGTTTGT  500

seq1  TAGTTTTCACACATGATCTGAATTGGTCATTGGAGCCATTTTATAAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCACACATGATCTGAATTGGTCATTGGAGCCATTTTATAAGTGA  550

seq1  AAGGCAGGTAATTTTTCTGGGTGGTAGGAGTTGGTTTTGATTTTTGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGTAATTTTTCTGGGTGGTAGGAGTTGGTTTTGATTTTTGGTTT  600

seq1  CGAGACAGGAACATACTATGTAACCCTGGCAGAGATCTGCCCGCCTCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGACAGGAACATACTATGTAACCCTGGCAGAGATCTGCCCGCCTCTGC  650

seq1  CCCCAGCACATAGGCAGGTATTTGATATACCTTCTGCCTTCTGTGTACGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCACATAGGCAGGTATTTGATATACCTTCTGCCTTCTGTGTACGA  700

seq1  CAGGAAATTGGTTCCCAAAGAGTAAGTAAGCCAACTTAGCTTGTAGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATTGGTTCCCAAAGAGTAAGTAAGCCAACTTAGCTTGTAGTCTA  750

seq1  GAGTAACACGCAGACCCCCCCGGTCTGCAATGTGTCCATCTACACACTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACACGCAGACCCCCCCGGTCTGCAATGTGTCCATCTACACACTCC  800

seq1  TTGTACTTTGTCCACTGG-CCCAACCAGAAAATGATGTCTTCCTGAAGTC  849
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  TTGTACTTTGTCCACTGGCCCCACCCAGAAAATGATGTCTTCCTGAAGTC  850

seq1  TG-TTGTCGCAGGCACTCATACACTCTCTCAGGGAATAGTCCATCCTTTG  898
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCGCAGGCACTCATACACTCTCTCAGGGAATAGTCCATCCTTTG  900

seq1  CTGCCTCTAAAGAACACAAGGAGACTTCTAGAGCGTGACACTT-CCTAAC  947
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGCCTCTAAAGAACACAAGGAGACTTCTAGAGCGTGACACTTCCCTAAC  950

seq1  TTCCATCTCATAGAGCACA-CCACTGA-GGCTCAGAGCCTT-CCCATG--  992
      ||||||||||||||||||| ||||||| || |||||||||| ||||||  
seq2  TTCCATCTCATAGAGCACATCCACTGAGGGTTCAGAGCCTTCCCCATGTC  1000

seq1  CCTGA-CCTAGGCC-CTTCGTAGG  1014
      | ||| |||||||| ||||||| |
seq2  CATGACCCTAGGCCTCTTCGTAAG  1024

seq1: chr5_67700851_67701958
seq2: B6Ng01-187K18.g_71_1191 (reverse)

seq1  GAACTCTCTTGTACTGATTGGC--AGCAGAATTG-AACACTG-ATTTA-T  45
      ||||||||||||||||||||||   ||||||||| ||||||| ||||| |
seq2  GAACTCTCTTGTACTGATTGGCCAGGCAGAATTGAAACACTGAATTTATT  50

seq1  GAGGTAGTTATTCTCT---GTGTAAAAGGAACCTTAAGAAGTT-TGTGCC  91
      ||||||| ||||||||   |||||||||||| ||||||||||| ||  ||
seq2  GAGGTAG-TATTCTCTCTGGTGTAAAAGGAAACTTAAGAAGTTGTGGCCC  99

seq1  CTGTGACCTGACAATTGTAATGAAAA-TAATTTACAA-TAAATAAATACA  139
       ||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  TTGTGACCTGACAATTGTAATGAAAATTAATTTACAATTAAATAAATACA  149

seq1  TACTGAAATGTGTA-TCTCAGTTCATTACT-AATACATTGGAAGTTTATT  187
      |||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  TACTGAAATGTGTATTCTCAGTTCATTACTAAATACATTGGAAGTTTATT  199

seq1  TGTAGTTATAGTATTTGTATTATGTTAGATGCTTTTATTGATTTTATCTC  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTATAGTATTTGTATTATGTTAGATGCTTTTATTGATTTTATCTC  249

seq1  CCTTCTCATCTTTTTGAGACAGGGTTTTAACATTTAACCTAGGCTGACCT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCATCTTTTTGAGACAGGGTTTTAACATTTAACCTAGGCTGACCT  299

seq1  CCATTTTGTGATCCTCCTGTCTCTATCTCTAAGTCTTGGAATTGCAGCTA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGTGATCCTCCTGTCTCTATCTCTAAGTCTTGGAATTGCAGCTA  349

seq1  TTTTTACTTTTTCTTAGCAAATATTG-AAGTAACTAAGCAAGACAGTAGA  386
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTTTACTTTTTCTTAGCAAATATTGAAAGTAACTAAGCAAGACAGTAGA  399

seq1  GCTATAATCCAAGTTGTAGCACAGGGAGTTGTCAGTGTGTGCTTTTGTTG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAATCCAAGTTGTAGCACAGGGAGTTGTCAGTGTGTGCTTTTGTTG  449

seq1  CCTTTAAAAAAAAATAAAGTGAGAGATGGCCTTCTTTATGCTGTGTACTA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAAAAAAATAAAGTGAGAGATGGCCTTCTTTATGCTGTGTACTA  499

seq1  AAACCATATAGGTCACATTCTCCTGGGCTGGGCCTCTCTATCTTGCTTAC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATATAGGTCACATTCTCCTGGGCTGGGCCTCTCTATCTTGCTTAC  549

seq1  ACCTCTGCTGGCTAGATGAGTAGGCAGGCTTTCCTGCAGCATTGGCTGGC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGCTGGCTAGATGAGTAGGCAGGCTTTCCTGCAGCATTGGCTGGC  599

seq1  AGAAGGGATGCCAGTAAACTGGGGCTCCTGAGTGTTCATATTGGCAGACT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGATGCCAGTAAACTGGGGCTCCTGAGTGTTCATATTGGCAGACT  649

seq1  GTCACAATCTGATGGTGCTGTTAATAAGATCGCTCCTAAAATCAGTTCAT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAATCTGATGGTGCTGTTAATAAGATCGCTCCTAAAATCAGTTCAT  699

seq1  GGTTTTAACATTTTTATATGTATGAATGTTTTGCCTGCATGTAGACCTGT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAACATTTTTATATGTATGAATGTTTTGCCTGCATGTAGACCTGT  749

seq1  GCATCACATGTGTGCAGTGCTCATGGAAGCCAGAAGAGAGTATGGGGTCC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACATGTGTGCAGTGCTCATGGAAGCCAGAAGAGAGTATGGGGTCC  799

seq1  TCTGGAATTGGAGTTGCAGAAGATCGTTAGCTGCCTTGTGGGTGCGAGGA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATTGGAGTTGCAGAAGATCGTTAGCTGCCTTGTGGGTGCGAGGA  849

seq1  ATTGAACCCAGGTCTCTGGAAGTCTCTTAACCACTGGGCCATCTCTTCAG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACCCAGGTCTCTGGAAGTCTCTTAACCACTGGGCCATCTCTTCAG  899

seq1  TCCCCATTAAGATCTTTTTTTTCCTTTTAAGATTTATTTTATTTATATGA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATTAAGATCTTTTTTTTCCTTTTAAGATTTATTTTATTTATATGA  949

seq1  GTGCACTGTACCTGTCTTCAGACACACCAGAAGAGAGCATTGGATCCATT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTGTACCTGTCTTCAGACACACCAGAAGAGAGCATTGGATCCATT  999

seq1  ACAGGAGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAGTTCAGGACC  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAGTTCAGGACC  1049

seq1  CCTGGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCTAGCCTT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCTAGCCTT  1099

seq1  CCATTAAGATTTTAATGAATTC  1108
      ||||||||||||||||||||||
seq2  CCATTAAGATTTTAATGAATTC  1121