BAC Information

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BAC

Clone NameB6Ng01-187O08
Chromosome5 (Build37)
Map Location 131,614,092 - 131,728,201
singlet/doubletdoublet
Overlap geneWbscr17
Upstream geneKctd7, Rabgef1, 0610007L01Rik, EG625540, Sbds, Tyw1, A330070K13Rik, Caln1
Downstream geneAuts2, 4930563F08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187O08.bB6Ng01-187O08.g
ACCGA012346GA012347
length648967
definitionB6Ng01-187O08.b B6Ng01-187O08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,727,554 - 131,728,201)(131,614,092 - 131,615,050)
sequence
gaattcttccatggtctactgtgatgtggaagacagcggccctgttttgt
tttgttgtaggtagtgtgatagaaaaggtattcacctggaaaagtgagtg
gtaagaatgaggtggctgcggtgggaacggggtcagggatgggtgactgg
atttcatgcccctgtcacctggaccgcctgagcaaaagcttcaggaggga
aaagacagcgccacctagagagttactagtgcctagagttcagatgaaga
aggagttctagatagagtgcagccctggaggacctcatttgcctattcat
gagtatgaacttaaacgtgaagacacattgagcctctgaaacggagccag
catttgtttgaaatcgactggctggccttcgctatgatggtgcatgccta
acatcccagtacttgcagcattgccatgagttcgagactagcctgggcta
cattatgagaccctatatcaactaaaccttgatgttaatggcaagcatta
tgacaacaatgatggtgatgatgatagagactttgaaggaggattgctgg
gcatccctctttttatctcttgtcaaacgcaaatgtttggatggagccat
tggtgtgtgcaggggctgaggggaacgtgtgtgtgtgtgtgtgtgtgt

gaattcactttgaatccaggtgaaaaccagaggctagtggcatggatcag
tggtagagtacctttgtagaatcccccagtgaggggctgggggcgtggct
ccgtggtacagcacctgcctagaatcccccagggaggagctggggaagga
aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaaaagcaaaa
agacacgaaccaaagtatatcaatcatcaaagatgattgatataaaaagg
ggcttagtcatgtggtcaataatcacacatgtcctttcatgagaagaaaa
tctggaagccttatggcattgtattatagcatcacagcccatacaggccc
aggatgcctcaaaaatacctgatcagtacaagctgtcagttcaacaagct
ctagaatcaccatagaaacaagccttaggacatgcctatgagggaatgtc
tagattgggttaacagaagtgggaatccccactcttaacataaggggctc
cactccatgagttgggggtcccagcatgaatacataaaaaggagaaagtg
ggctaagcaccatcagcatccctctctgccttttaactgtgaatgcgcta
agatcagatgcctcgcattccagtggtggagccttcctagccatgacata
ctatacccttcccctgctttgagccagaatatacctttcttccttgaatt
gctttcatcaggcattttgtcatagtaacaagacaagcaactcacccaca
tagccagtgcctgtatgatgccatcctccctgctcagtctagacctttac
tcctgactttccagaccccccacatgcatgcacccaccaagctcaacact
attgacaccccacatctgtgcacaaaactgacgttgctgggatagaacca
gctagaatttgcagggggggaaaataaaaaggaattgaagaacccttttc
ctcaggaaagcaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_131727554_131728201
seq2: B6Ng01-187O08.b_46_693 (reverse)

seq1  ACACACACACACACACACACACGTTCCCCTCAGCCCCTGCACACACCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACGTTCCCCTCAGCCCCTGCACACACCAAT  50

seq1  GGCTCCATCCAAACATTTGCGTTTGACAAGAGATAAAAAGAGGGATGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCATCCAAACATTTGCGTTTGACAAGAGATAAAAAGAGGGATGCCC  100

seq1  AGCAATCCTCCTTCAAAGTCTCTATCATCATCACCATCATTGTTGTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCCTCCTTCAAAGTCTCTATCATCATCACCATCATTGTTGTCATA  150

seq1  ATGCTTGCCATTAACATCAAGGTTTAGTTGATATAGGGTCTCATAATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCCATTAACATCAAGGTTTAGTTGATATAGGGTCTCATAATGTA  200

seq1  GCCCAGGCTAGTCTCGAACTCATGGCAATGCTGCAAGTACTGGGATGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGCTAGTCTCGAACTCATGGCAATGCTGCAAGTACTGGGATGTTA  250

seq1  GGCATGCACCATCATAGCGAAGGCCAGCCAGTCGATTTCAAACAAATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCACCATCATAGCGAAGGCCAGCCAGTCGATTTCAAACAAATGCT  300

seq1  GGCTCCGTTTCAGAGGCTCAATGTGTCTTCACGTTTAAGTTCATACTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCGTTTCAGAGGCTCAATGTGTCTTCACGTTTAAGTTCATACTCAT  350

seq1  GAATAGGCAAATGAGGTCCTCCAGGGCTGCACTCTATCTAGAACTCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGCAAATGAGGTCCTCCAGGGCTGCACTCTATCTAGAACTCCTTC  400

seq1  TTCATCTGAACTCTAGGCACTAGTAACTCTCTAGGTGGCGCTGTCTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTGAACTCTAGGCACTAGTAACTCTCTAGGTGGCGCTGTCTTTTC  450

seq1  CCTCCTGAAGCTTTTGCTCAGGCGGTCCAGGTGACAGGGGCATGAAATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGAAGCTTTTGCTCAGGCGGTCCAGGTGACAGGGGCATGAAATCC  500

seq1  AGTCACCCATCCCTGACCCCGTTCCCACCGCAGCCACCTCATTCTTACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCCATCCCTGACCCCGTTCCCACCGCAGCCACCTCATTCTTACCA  550

seq1  CTCACTTTTCCAGGTGAATACCTTTTCTATCACACTACCTACAACAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTTCCAGGTGAATACCTTTTCTATCACACTACCTACAACAAAAC  600

seq1  AAAACAGGGCCGCTGTCTTCCACATCACAGTAGACCATGGAAGAATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGGCCGCTGTCTTCCACATCACAGTAGACCATGGAAGAATTC  648


seq1: chr5_131614092_131615050
seq2: B6Ng01-187O08.g_66_1032

seq1  GAATTCACTTTGAATCCAGGTGAAAACCAGAGGCTAGTGGCATGGATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGAATCCAGGTGAAAACCAGAGGCTAGTGGCATGGATCAG  50

seq1  TGGTAGAGTACCTTTGTAGAATCCCCCAGTGAGGGGCTGGGGGCGTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGTACCTTTGTAGAATCCCCCAGTGAGGGGCTGGGGGCGTGGCT  100

seq1  CCGTGGTACAGCACCTGCCTAGAATCCCCCAGGGAGGAGCTGGGGAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGTACAGCACCTGCCTAGAATCCCCCAGGGAGGAGCTGGGGAAGGA  150

seq1  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAAGCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAAGCAAAA  200

seq1  AGACACGAACCAAAGTATATCAATCATCAAAGATGATTGATATAAAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACGAACCAAAGTATATCAATCATCAAAGATGATTGATATAAAAAGG  250

seq1  GGCTTAGTCATGTGGTCAATAATCACACATGTCCTTTCATGAGAAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGTCATGTGGTCAATAATCACACATGTCCTTTCATGAGAAGAAAA  300

seq1  TCTGGAAGCCTTATGGCATTGTATTATAGCATCACAGCCCATACAGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGCCTTATGGCATTGTATTATAGCATCACAGCCCATACAGGCCC  350

seq1  AGGATGCCTCAAAAATACCTGATCAGTACAAGCTGTCAGTTCAACAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCCTCAAAAATACCTGATCAGTACAAGCTGTCAGTTCAACAAGCT  400

seq1  CTAGAATCACCATAGAAACAAGCCTTAGGACATGCCTATGAGGGAATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATCACCATAGAAACAAGCCTTAGGACATGCCTATGAGGGAATGTC  450

seq1  TAGATTGGGTTAACAGAAGTGGGAATCCCCACTCTTAACATAAGGGGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGGGTTAACAGAAGTGGGAATCCCCACTCTTAACATAAGGGGCTC  500

seq1  CACTCCATGAGTTGGGGGTCCCAGCATGAATACATAAAAAGGAGAAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCATGAGTTGGGGGTCCCAGCATGAATACATAAAAAGGAGAAAGTG  550

seq1  GGCTAAGCACCATCAGCATCCCTCTCTGCCTTTTAACTGTGAATGCGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAGCACCATCAGCATCCCTCTCTGCCTTTTAACTGTGAATGCGCTA  600

seq1  AGATCAGATGCCTCGCATTCCAGTGGTGGAGCCTTCCTAGCCATGACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGATGCCTCGCATTCCAGTGGTGGAGCCTTCCTAGCCATGACATA  650

seq1  CTATACCCTTCCCCTGCTTTGAGCCAGAATATACCTTTCTTCCTTGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCCTTCCCCTGCTTTGAGCCAGAATATACCTTTCTTCCTTGAATT  700

seq1  GCTTTCATCAGGCATTTTGTCATAGTAACAAGACAAGCAACTCACCCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCATCAGGCATTTTGTCATAGTAACAAGACAAGCAACTCACCCACA  750

seq1  TAGCCAGTGCCTGTATGATGCCATCCTCCCTGCTCAGTCTAGACC-TTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAGCCAGTGCCTGTATGATGCCATCCTCCCTGCTCAGTCTAGACCTTTAC  800

seq1  TCCTGAC-TTCCAGACCCCCCACATGCATGCACCCACCAAGCTCAACAC-  847
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  TCCTGACTTTCCAGACCCCCCACATGCATGCACCCACCAAGCTCAACACT  850

seq1  AATGACACCCCACATCTGTGCACAAAACTGACGTTGCTGGGATAGAACCA  897
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACACCCCACATCTGTGCACAAAACTGACGTTGCTGGGATAGAACCA  900

seq1  GCTAGAATTTGCAGGGGGGGAAAAT-AAAAGGAAT--GAGGACCCTTT--  942
      ||||||||||||||||||||||||| |||||||||   || |||||||  
seq2  GCTAGAATTTGCAGGGGGGGAAAATAAAAAGGAATTGAAGAACCCTTTTC  950

seq1  CTCAGGGAAGCAAAATG  959
      |||||| ||||||||||
seq2  CTCAGGAAAGCAAAATG  967


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