BAC Information

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BAC

Clone NameB6Ng01-189G21
Chromosome5 (Build37)
Map Location 11,122,603 - 11,123,570
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041395, LOC381612, EG625586, LOC242809, LOC623849, LOC100041408, LOC667880, EG667888, EG667901, EG667907
Downstream geneLOC667916, LOC100041472, EG545728, LOC100042819, LOC667942, LOC667948, EG667949, Speer1-ps1, EG667956, LOC667961, EG667967, LOC100042858, LOC667974, EG667986, EG623898, EG668001, LOC668008, EG668011, LOC668017, EG668021, LOC623998, EG668043, LOC545732, LOC384144
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189G21.bB6Ng01-189G21.g
ACCGA013453GA013454
length845941
definitionB6Ng01-189G21.b B6Ng01-189G21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgccaactaagggatgttgaaagtgagagaatggcctttcaag
ggaatacaacaccaactggttatttaatgccacgaaaacacatataaaaa
gtaacatcagttactagagactgatcaagctgtatttatgtattaaagaa
taccaccattaccccacactaaggccaataacaattaacacaaaaagatc
ccatgaatttgaaaaagagtaggtgtgaagatgaagtttatggaggaaag
ggaaggggagatatgatatacaattactttatcatttcaggatcataaaa
actatatacaataaaaaagaatgaagggattaatttggctagaaattcaa
aggtgcagtgcatcatcaaggcagagaggtcatggactcagaaatctcag
gcagttggccactcatgaaactgtggtcaggaagtcgtgacactgaaatg
atttattgtgttttgctatcttacttctcttttttcagtgtgggatgcta
tctgataaagtcatttctcgcacagtgagaggaggttagtctaccttttt
tttttttttttagtttttctctaatgtattttattccatttttattagat
attttcttcatttacattgcaaatgctatactgaaaagttcccccatacc
ctccccacatcccgtgctgctacccacccacttccactttctttggccct
ggcgttcccctgtcctggggtatataaagtttgcaagaccaagggtcctc
tcttcccaatgatgggccgactaggccatctttctggctacatatgcagc
tagagacacaagctcttggttaatacagggggtatacgttgccat
gaattctttctctagggttgaggcctcctgactcttctcccttcgacagc
agtacatctgttgattgtccttgttcagattatgtataggcagccatgct
gttgaggcttactgctgtaacttttctaatagtttaaggaggcaaaatct
gctagaattgctctaccccctcttccacgatgaaatgcccaagctattga
aaaaaaaatatgaaaagataaaggaaaaatgtgttttgtttctgaatttt
atgcagagtaagatgtacacaacagagcacaagaccttcaaatttgacca
ttaattcaaatatgtaatttatttttttaataataaagcctacatctgtg
tataaaggattggcatcacacctcctaaagaaatcatacaaacatacaga
aaacccatgaaagattatacagtgtcttggataaacataagtaataatcc
caatgaactctaatctcacacttgttaaaatagccataaccaagaagatg
taagactgacatgtgtatgcatacctcatgtgacagaagaaatatttgct
accaactgctttctgataagactacatagatatttcaaagcaatgctatg
aaattatttttttcttagttgtttataaaccttacctcttttatcttgaa
aacttgacttcaaaatatgaattcatgttttagaataaattctggtgcaa
tacacctagcaaatgaaattccacatgtgctggtaataaattacaagaaa
atttaaaacacctaaaaggtactcagaaaacaaaattaatttacataaag
gccagcccttcaacacaataaatacctaaaatgaatttgcatgtctatga
tgttaactcaccatccccactggtgtcatttaccattgccagattaaaca
ccctcgaaatgaatgtaattagattactctatattggtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_11122603_11123570
seq2: B6Ng01-189G21.g_65_1005

seq1  GAATTCTTTCTCTAGGGTTGAGGCCTCCTGACTCTTCTCCCTTCGACAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCTAGGGTTGAGGCCTCCTGACTCTTCTCCCTTCGACAGC  50

seq1  AGTACATCTGTTGATTGTCCTTGTTCAGATTATGTATAGGCAGCCATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATCTGTTGATTGTCCTTGTTCAGATTATGTATAGGCAGCCATGCT  100

seq1  GTTGAGGCTTACTGCTGTAACTTTTCTAATAGTTTAAGGAGGCAAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGCTTACTGCTGTAACTTTTCTAATAGTTTAAGGAGGCAAAATCT  150

seq1  GCTAGAATTGCTCTACCCCCTCTTCCACGATGAAATGCCCAAGCTATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAATTGCTCTACCCCCTCTTCCACGATGAAATGCCCAAGCTATTGA  200

seq1  AAAAAAAATATGAAAAGATAAAGGAAAAATGTGTTTTGTTTCTGAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATATGAAAAGATAAAGGAAAAATGTGTTTTGTTTCTGAATTTT  250

seq1  ATGCAGAGTAAGATGTACACAACAGAGCACAAGACCTTCAAATTTGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGTAAGATGTACACAACAGAGCACAAGACCTTCAAATTTGACCA  300

seq1  TTAATTCAAATATGTAATTTATTTTTTTAATAATAAAGCCTACATCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCAAATATGTAATTTATTTTTTTAATAATAAAGCCTACATCTGTG  350

seq1  TATAAAGGATTGGCATCACACCTCCTAAAGAAATCATACAAACATACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGATTGGCATCACACCTCCTAAAGAAATCATACAAACATACAGA  400

seq1  AAACCCATGAAAGATTATACAGTGTCTTGGATAAACATAAGTAATAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCATGAAAGATTATACAGTGTCTTGGATAAACATAAGTAATAATCC  450

seq1  CAATGAACTCTAATCTCACACTTGTTAAAATAGCCATAACCAAGAAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAACTCTAATCTCACACTTGTTAAAATAGCCATAACCAAGAAGATG  500

seq1  TAAGACTGACATGTGTATGCATACCTCATGTGACAGAAGAAATATTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTGACATGTGTATGCATACCTCATGTGACAGAAGAAATATTTGCT  550

seq1  ACCAACTGCTTTCTGATAAGACTACATAGATATTTCAAAGCAATGCTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTGCTTTCTGATAAGACTACATAGATATTTCAAAGCAATGCTATG  600

seq1  AAATTATTTTTTTCTTAGTTGTTTATAAACCTTACCTC-TATATCTTGAA  649
      |||||||||||||||||||||||||||||||||||||| | ||||||| |
seq2  AAATTATTTTTTTCTTAGTTGTTTATAAACCTTACCTCTTTTATCTTG-A  649

seq1  AAACTTGACTTCAAAATAATGAATTCATGTTTTAG-ATAAATTCTGGTGC  698
      ||||||||||||||||| ||||||||||||||||| ||||||||||||||
seq2  AAACTTGACTTCAAAAT-ATGAATTCATGTTTTAGAATAAATTCTGGTGC  698

seq1  AATACA-CTAGCAAAATGAAATT-CACATGTGCTGGTAATAAAATTACAA  746
      |||||| ||||| |||||||||| |||||||||||||||| |||||||||
seq2  AATACACCTAGC-AAATGAAATTCCACATGTGCTGGTAAT-AAATTACAA  746

seq1  GAAAATTTAAAACACTAAAAAGGTACTTCAGAAAACAAAATTAAAATTTA  796
      |||||||||||||||  ||||||||| |||||||||||||||  ||||||
seq2  GAAAATTTAAAACACCTAAAAGGTAC-TCAGAAAACAAAATT--AATTTA  793

seq1  CATAAAGGCCAGCCCTCCAACAACCAAATAAATACCAAAAAAATTGAAAT  846
      |||||||||||||||| |||||    |||||||||| ||||   || |||
seq2  CATAAAGGCCAGCCCTTCAACA---CAATAAATACCTAAAA---TG-AAT  836

seq1  TGGCATGTCCTATTGATGTTTACTCACCATCCCCACT-GTGTCATTTTAC  895
      | |||||| ||| ||||||| |||||||||||||||| |||||| |||||
seq2  TTGCATGT-CTA-TGATGTTAACTCACCATCCCCACTGGTGTCA-TTTAC  883

seq1  CCAATTGCCAAGATCTAAACACAACCTCAGAAATGAAATAGTAAATAGAT  945
      |  |||||| |||| |||||||  |||| ||||||||   |||| |||| 
seq2  C--ATTGCC-AGAT-TAAACAC--CCTC-GAAATGAA--TGTAATTAGA-  923

seq1  TTTACTCTATATAATGTGGTATT  968
       |||||||||||    |||||||
seq2  -TTACTCTATAT----TGGTATT  941