BAC Information

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BAC

Clone NameB6Ng01-189J21
Chromosome5 (Build37)
Map Location 32,600,229 - 32,758,680
singlet/doubletdoublet
Overlap genePlb1, EG665350, LOC545743
Upstream geneGckr, Zfp512, 4930548H24Rik, Xab1, Supt7l, Slc4a1ap, Mrpl33, Rbks, LOC100040000, Bre, Fosl2, LOC672217
Downstream genePpp1cb, LOC634553, LOC675983, Yes1, LOC100039775, Pisd, C330019G07Rik, LOC100040141, Depdc5, Ywhah, LOC100040169, Slc5a1, Spon2, Ctbp1, Maea, 4933407H18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189J21.bB6Ng01-189J21.g
ACCGA013592GA013593
length1,1121,018
definitionB6Ng01-189J21.b B6Ng01-189J21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,757,567 - 32,758,680)(32,600,229 - 32,601,242)
sequence
gaattcattaaccgttgtcagctaggagaactgttaagtagaggtaatta
aagatagatgaacagtcaccatcaatggtgattaatggctgaaatgttga
gtctgtggcccttccctttctcttacaaggagattacaggagcagtatgt
atttaggtcagccttagtttgttacaacaaaacctgtcatctacataggt
aaaagtgtttctcttttagtgtgaaaggatgcctccttcaaacagcatac
caggagtttgcaccaacagcatcttattggtgaggaaaagaatacaaaat
gaaactttgtttcaaatgacatacttgaaatggtttgtcattaatacaag
ttggtctcttgcaacaaaagtctttccattcactttctgcattggaggtt
taactacttggtttcttaagtttctctttcaattgactctgataaataga
ataatttgctgagctctttctttcttccttcctttcttttccccactcac
tcactccctgccactctctccttttggttctggggaatcgaacatagatc
caaacacatactaagaaagtgttctgcctttgaactataactctagccca
agatgagttttctaaaatgttataaaatcaatagatctcctaaaactaaa
accatgtatttttatatttaatataaaagcccatttagaatttataatat
agaatttatgaattattatttgcaacttaaagtgcatccagttcattaca
catgttctttttaaaaagttgtatggccgggcggtggtggcgcacgcctt
taatcctagcacttgggaggcagagacaggtggatttctgagttcgaggc
cagcctggttctacaaagtgagttccaggacagccaagactacagagaaa
ccctgtctcgaaaaatcaaaaaaaaaaagttgtatgattgttgtatgtga
gagtctgtttgtgcatgtacacatgcaaggacaacttggtagtgttggta
ttctcttttcaacctttgcatgggtccagatggacagcaagccacttgct
agtgagcatttccaccccccaacatcataggtaataaattgaaataaccc
tgggttccttgt
gaattccagacatgatgatgggggaaggaagaataaagaaagatacttgg
tgactctagaatctaagaaacaagacttcgaagctgccatcaggctttgc
aatggcagccaaagttatgtgagtcaatttgaacctaaacctggaaagaa
acagttatgagttttggtctctcctacaaatgcagaaataaccactgtcc
atggcttcctaatgaaaacatacttctgggtagttctcaaaatgtggtac
ccagacaggacttggggcagccacagtacctgagcatcagacatgcaaac
atcttagacccaccatagacctgctgaatctgaagctcttggtagttcag
gggtcataggtgattctgttgcccaacccagtttgaggaccagtaatctc
catattctgtcaggtacacattcatctgtcagtctacatcctattctagg
acacatcagggacttttccttaccagtgcaagtcctcagtgggtgtggca
gctgccattctgcaagcagtgtgaaagtggtagagaagcctgagttggca
gccagtgggagcaaggcatgccactgggaaagctagttttctcagacata
taggggactaggtcagggcttcctgaaaccctcattttccattcacccag
atttgctttccagttcacagcttgcggccagctgatatcaagatcatagg
agcattgggtgactcgctcacggtaggtgatctcaactgtagaaaattaa
gaagagagatgtttatgattttgaggcagggttttgtgtagctcaggctg
gtgtcaaattcactatgtaactggggttggccttgaactcctgatcttcc
tgtgtctacctcccaagttgctgggattacagctgtgggctaccacatcc
aactaggagggagagattttaatgaatacaaaaacatgaaactggaaagt
tgaggttttactctagcctgtttctggttccaatccttcaaaggctccct
attccctttgccttggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_32757567_32758680
seq2: B6Ng01-189J21.b_46_1157 (reverse)

seq1  ACAAAGAACACAGGG-TATTTCAATTAATAACTAATG-TGTT-GGGGGTG  47
      |||| |||| ||||| |||||||||| || ||  ||| |||| |||||||
seq2  ACAAGGAACCCAGGGTTATTTCAATTTATTACCTATGATGTTGGGGGGTG  50

seq1  AAATGGCTCACTTAGCAAAGGTGCTTGCTGTTCCAATTCCTGGAACCCAT  97
       ||  |||||| |||| |||  |||||||| ||||    |||| ||||||
seq2  GAAATGCTCAC-TAGC-AAGTGGCTTGCTG-TCCA---TCTGG-ACCCAT  93

seq1  GCAAAGGTTG-AAAGAGATAACCAACACTACCAAGTTGTCCTTTGCATGT  146
      |||||||||| |||||||  ||||||||||||||||||||| ||||||||
seq2  GCAAAGGTTGAAAAGAGAATACCAACACTACCAAGTTGTCC-TTGCATGT  142

seq1  GTACATGCACAAACAGACTCTCACATACAACAATCATACAAC-TTTTTTT  195
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTACATGCACAAACAGACTCTCACATACAACAATCATACAACTTTTTTTT  192

seq1  TTTGATTTTTCGAGACAGGGTTTCTCTGTAGTCTTGGCTGTCCTGGAACT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTTCGAGACAGGGTTTCTCTGTAGTCTTGGCTGTCCTGGAACT  242

seq1  CACTTTGTAG-ACCAGGCTGGCCTCGAACTCAGAAATCCACCTGTCTCTG  294
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTAGAACCAGGCTGGCCTCGAACTCAGAAATCCACCTGTCTCTG  292

seq1  CCTCCCAAGTGCTAGGATTAAAGGCGTGCGCCACCACCGCCCGGCCATAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAAGTGCTAGGATTAAAGGCGTGCGCCACCACCGCCCGGCCATAC  342

seq1  AACTTTTTAAAAAGAACATGTGTAATGAACTGGATGCACTTTAAGTTGCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTAAAAAGAACATGTGTAATGAACTGGATGCACTTTAAGTTGCA  392

seq1  AATAATAATTCATAAATTCTATATTATAAATTCTAAATGGGCTTTTATAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATTCATAAATTCTATATTATAAATTCTAAATGGGCTTTTATAT  442

seq1  TAAATATAAAAATACATGGTTTTAGTTTTAGGAGATCTATTGATTTTATA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATAAAAATACATGGTTTTAGTTTTAGGAGATCTATTGATTTTATA  492

seq1  ACATTTTAGAAAACTCATCTTGGGCTAGAGTTATAGTTCAAAGGCAGAAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAGAAAACTCATCTTGGGCTAGAGTTATAGTTCAAAGGCAGAAC  542

seq1  ACTTTCTTAGTATGTGTTTGGATCTATGTTCGATTCCCCAGAACCAAAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTAGTATGTGTTTGGATCTATGTTCGATTCCCCAGAACCAAAAG  592

seq1  GAGAGAGTGGCAGGGAGTGAGTGAGTGGGGAAAAGAAAGGAAGGAAGAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGTGGCAGGGAGTGAGTGAGTGGGGAAAAGAAAGGAAGGAAGAAA  642

seq1  GAAAGAGCTCAGCAAATTATTCTATTTATCAGAGTCAATTGAAAGAGAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCTCAGCAAATTATTCTATTTATCAGAGTCAATTGAAAGAGAAA  692

seq1  CTTAAGAAACCAAGTAGTTAAACCTCCAATGCAGAAAGTGAATGGAAAGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAAACCAAGTAGTTAAACCTCCAATGCAGAAAGTGAATGGAAAGA  742

seq1  CTTTTGTTGCAAGAGACCAACTTGTATTAATGACAAACCATTTCAAGTAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTGCAAGAGACCAACTTGTATTAATGACAAACCATTTCAAGTAT  792

seq1  GTCATTTGAAACAAAGTTTCATTTTGTATTCTTTTCCTCACCAATAAGAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGAAACAAAGTTTCATTTTGTATTCTTTTCCTCACCAATAAGAT  842

seq1  GCTGTTGGTGCAAACTCCTGGTATGCTGTTTGAAGGAGGCATCCTTTCAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGGTGCAAACTCCTGGTATGCTGTTTGAAGGAGGCATCCTTTCAC  892

seq1  ACTAAAAGAGAAACACTTTTACCTATGTAGATGACAGGTTTTGTTGTAAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAGAGAAACACTTTTACCTATGTAGATGACAGGTTTTGTTGTAAC  942

seq1  AAACTAAGGCTGACCTAAATACATACTGCTCCTGTAATCTCCTTGTAAGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGGCTGACCTAAATACATACTGCTCCTGTAATCTCCTTGTAAGA  992

seq1  GAAAGGGAAGGGCCACAGACTCAACATTTCAGCCATTAATCACCATTGAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGAAGGGCCACAGACTCAACATTTCAGCCATTAATCACCATTGAT  1042

seq1  GGTGACTGTTCATCTATCTTTAATTACCTCTACTTAACAGTTCTCCTAGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTGTTCATCTATCTTTAATTACCTCTACTTAACAGTTCTCCTAGC  1092

seq1  TGACAACGGTTAATGAATTC  1114
      ||||||||||||||||||||
seq2  TGACAACGGTTAATGAATTC  1112

seq1: chr5_32600229_32601242
seq2: B6Ng01-189J21.g_65_1082

seq1  GAATTCCAGACATGATGATGGGGGAAGGAAGAATAAAGAAAGATACTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACATGATGATGGGGGAAGGAAGAATAAAGAAAGATACTTGG  50

seq1  TGACTCTAGAATCTAAGAAACAAGACTTCGAAGCTGCCATCAGGCTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTAGAATCTAAGAAACAAGACTTCGAAGCTGCCATCAGGCTTTGC  100

seq1  AATGGCAGCCAAAGTTATGTGAGTCAATTTGAACCTAAACCTGGAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGCCAAAGTTATGTGAGTCAATTTGAACCTAAACCTGGAAAGAA  150

seq1  ACAGTTATGAGTTTTGGTCTCTCCTACAAATGCAGAAATAACCACTGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTATGAGTTTTGGTCTCTCCTACAAATGCAGAAATAACCACTGTCC  200

seq1  ATGGCTTCCTAATGAAAACATACTTCTGGGTAGTTCTCAAAATGTGGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTCCTAATGAAAACATACTTCTGGGTAGTTCTCAAAATGTGGTAC  250

seq1  CCAGACAGGACTTGGGGCAGCCACAGTACCTGAGCATCAGACATGCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAGGACTTGGGGCAGCCACAGTACCTGAGCATCAGACATGCAAAC  300

seq1  ATCTTAGACCCACCATAGACCTGCTGAATCTGAAGCTCTTGGTAGTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGACCCACCATAGACCTGCTGAATCTGAAGCTCTTGGTAGTTCAG  350

seq1  GGGTCATAGGTGATTCTGTTGCCCAACCCAGTTTGAGGACCAGTAATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATAGGTGATTCTGTTGCCCAACCCAGTTTGAGGACCAGTAATCTC  400

seq1  CATATTCTGTCAGGTACACATTCATCTGTCAGTCTACATCCTATTCTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTGTCAGGTACACATTCATCTGTCAGTCTACATCCTATTCTAGG  450

seq1  ACACATCAGGGACTTTTCCTTACCAGTGCAAGTCCTCAGTGGGTGTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCAGGGACTTTTCCTTACCAGTGCAAGTCCTCAGTGGGTGTGGCA  500

seq1  GCTGCCATTCTGCAAGCAGTGTGAAAGTGGTAGAGAAGCCTGAGTTGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCATTCTGCAAGCAGTGTGAAAGTGGTAGAGAAGCCTGAGTTGGCA  550

seq1  GCCAGTGGGAGCAAGGCATGCCACTGGGAAAGCTAGTTTTCTCAGACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGGGAGCAAGGCATGCCACTGGGAAAGCTAGTTTTCTCAGACATA  600

seq1  TAGGGGACTAGGTCAGGGCTTCCTGAAACCCTCATTTTCCATTCACCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGACTAGGTCAGGGCTTCCTGAAACCCTCATTTTCCATTCACCCAG  650

seq1  ATTTGCTTTCCAGTTCACAGCTTGCGGCCAGCTGATATCAAGATCATAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTTCCAGTTCACAGCTTGCGGCCAGCTGATATCAAGATCATAGG  700

seq1  AGCATTGGGTGACTCGCTCACGGTAGGTGATCTCAACTGTAGAAAATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGGTGACTCGCTCACGGTAGGTGATCTCAACTGTAGAAAATTAA  750

seq1  GAAGAGAGATGTTTATGATTTTGAGGCAGGGTTTTGTGTAGCTCAGGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGATGTTTATGATTTTGAGGCAGGGTTTTGTGTAGCTCAGGCTG  800

seq1  GTGTCAAATTCACTATGTAACTGGGGTTGGCCTTGAACTCCTGATCTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAATTCACTATGTAACTGGGGTTGGCCTTGAACTCCTGATCTTCC  850

seq1  TGTGTCTACCTCCCAAG-TGCTGGGATTACAGCTGTGGGCTACCACATCC  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTGTCTACCTCCCAAGTTGCTGGGATTACAGCTGTGGGCTACCACATCC  900

seq1  AACTAGGA-GGAGAGATTTTAATGAATACAAAAACATGAAACT-GAAAGT  947
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  AACTAGGAGGGAGAGATTTTAATGAATACAAAAACATGAAACTGGAAAGT  950

seq1  TGAGGTTTTACTCTTAGCCTGTTTCTGGTCCCAATCC-TCAAAGGCTCCC  996
      ||||||||||||| ||||||||||||||| ||||||| ||||||||||||
seq2  TGAGGTTTTACTC-TAGCCTGTTTCTGGTTCCAATCCTTCAAAGGCTCCC  999

seq1  TATTCCCTTTGCC-TGGCA  1014
      ||||||||||||| |||||
seq2  TATTCCCTTTGCCTTGGCA  1018