BAC Information

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BAC

Clone NameB6Ng01-191P24
Chromosome5 (Build37)
Map Location 38,221,226 - 38,393,539
singlet/doubletdoublet
Overlap genenone
Upstream geneMan2b2, Ppp2r2c, Wfs1, Jakmip1, EG330070, Gm1043, LOC100040936, Crmp1, Evc, Evc2, LOC100040355, LOC100040988, Stk32b, Cytl1, Msx1
Downstream geneStx18, Nsg1, LOC100040397, Zfp509, Lyar, Tmem128, Otop1, Drd5, 4930487D11Rik, Slc2a9, Wdr1, 4930421P07Rik, 6820424L24Rik, Clnk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191P24.bB6Ng01-191P24.g
ACCGA015354GA015355
length589304
definitionB6Ng01-191P24.b B6Ng01-191P24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,221,226 - 38,221,820)(38,393,236 - 38,393,539)
sequence
tttttaatgcaaagagcactggggaaggttcagggccagacagtggcacc
cagagctcacttgagctgagtgaattgaaaggtaaatgaggaatgctgga
gggcttagaatcaggctccggaggaggccacggaggctggaccaactcag
caggtgaggtaggaggacagatttagcactcactgttgtgatcagtggat
gggagggactcaaatttcttcccactctcctagtgaaccctgagagacat
gtatatatatatatcctgtttccagtctgactctgagtgtctgcccccca
agcctccccccccccacctctgtctctaagctggaggcatgaccccccat
ggagacccaagcttcctttttttttttttttttttttttaaagatttatt
tatttattatatgtaagtacattgtagctgtcttcagacactccagaaga
gggaatcagatctcgttacagatggttgtgagccaccatgtggttgctgg
gatttgaactctggaccttcggaagatcagtcgggtgctcttacccactg
agccatctcaccagccccaagcttcctttcttatctcct
tcaggggactaaagtggcatgtgagcctgctggtttcatggctgtagctg
gagtatactcataagtagttggaagaaggctccccgctgcttcttggcag
agatgtggaaaggaaaggaagggagaggagaaagaccagacttctgttat
tttggatatgaagtatagctctccctaaagttcatgtgttaagcactggt
ctccagaccatgactggatggtgagggctctacctccaccaatggagaag
ccccttgaaggattcctaacatgctgtgtttgggaggtggcggggagtgg
aagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_38221226_38221820
seq2: B6Ng01-191P24.b_43_637

seq1  GAATTCTTTTTAATGCAAAGAGCACTGGGGAAGGTTCAGGGCCAGACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAATGCAAAGAGCACTGGGGAAGGTTCAGGGCCAGACAGT  50

seq1  GGCACCCAGAGCTCACTTGAGCTGAGTGAATTGAAAGGTAAATGAGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCAGAGCTCACTTGAGCTGAGTGAATTGAAAGGTAAATGAGGAAT  100

seq1  GCTGGAGGGCTTAGAATCAGGCTCCGGAGGAGGCCACGGAGGCTGGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGGCTTAGAATCAGGCTCCGGAGGAGGCCACGGAGGCTGGACCA  150

seq1  ACTCAGCAGGTGAGGTAGGAGGACAGATTTAGCACTCACTGTTGTGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCAGGTGAGGTAGGAGGACAGATTTAGCACTCACTGTTGTGATCA  200

seq1  GTGGATGGGAGGGACTCAAATTTCTTCCCACTCTCCTAGTGAACCCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGGGAGGGACTCAAATTTCTTCCCACTCTCCTAGTGAACCCTGAG  250

seq1  AGACATGTATATATATATATCCTGTTTCCAGTCTGACTCTGAGTGTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTATATATATATATCCTGTTTCCAGTCTGACTCTGAGTGTCTGC  300

seq1  CCCCCAAGCCTCCCCCCCCCCACCTCTGTCTCTAAGCTGGAGGCATGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAGCCTCCCCCCCCCCACCTCTGTCTCTAAGCTGGAGGCATGACC  350

seq1  CCCCATGGAGACCCAAGCTTCCTTTTTTTTTTTTTTTTTTTTTTTAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGGAGACCCAAGCTTCCTTTTTTTTTTTTTTTTTTTTTTTAAAGA  400

seq1  TTTATTTATTTATTATATGTAAGTACATTGTAGCTGTCTTCAGACACTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTATATGTAAGTACATTGTAGCTGTCTTCAGACACTCC  450

seq1  AGAAGAGGGAATCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGGAATCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGT  500

seq1  TGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTAC  550
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGCTGGGATTTGAACTCTGGACCTTCGGAAGATCAGTCGGGTGCTCTTAC  550

seq1  CCACTGAGCCATCTCACCAGCCCCAAGCTTCCTTTCTTATCTCCT  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAGCCATCTCACCAGCCCCAAGCTTCCTTTCTTATCTCCT  595

seq1: chr5_38393236_38393539
seq2: B6Ng01-191P24.g_75_378 (reverse)

seq1  CCTTCCACTCCCCGCCACCTCCCAAACACAGCATGTTAGGAATCCTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCACTCCCCGCCACCTCCCAAACACAGCATGTTAGGAATCCTTCAA  50

seq1  GGGGCTTCTCCATTGGTGGAGGTAGAGCCCTCACCATCCAGTCATGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTCTCCATTGGTGGAGGTAGAGCCCTCACCATCCAGTCATGGTCT  100

seq1  GGAGACCAGTGCTTAACACATGAACTTTAGGGAGAGCTATACTTCATATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCAGTGCTTAACACATGAACTTTAGGGAGAGCTATACTTCATATC  150

seq1  CAAAATAACAGAAGTCTGGTCTTTCTCCTCTCCCTTCCTTTCCTTTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAACAGAAGTCTGGTCTTTCTCCTCTCCCTTCCTTTCCTTTCCAC  200

seq1  ATCTCTGCCAAGAAGCAGCGGGGAGCCTTCTTCCAACTACTTATGAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCCAAGAAGCAGCGGGGAGCCTTCTTCCAACTACTTATGAGTAT  250

seq1  ACTCCAGCTACAGCCATGAAACCAGCAGGCTCACATGCCACTTTAGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGCTACAGCCATGAAACCAGCAGGCTCACATGCCACTTTAGTCCC  300

seq1  CTGA  304
      ||||
seq2  CTGA  304