BAC Information

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BAC

Clone NameB6Ng01-193F07
Chromosome5 (Build37)
Map Location 66,142,071 - 66,254,253
singlet/doubletdoublet
Overlap gene1700022K14Rik, LOC384261, B3bp, LOC100041809
Upstream geneKlf3, Tlr1, Tlr6, 9130005N14Rik, Tmem156, Klhl5, Wdr19, Rfc1, Klb, Rpl9, Lias, Ugdh, 1110003E01Rik, 4930589O11Rik, Hip2, 9030416H16Rik
Downstream geneRhoh, LOC626641, EG666827, Chrna9, 9130230L23Rik, BC013481, LOC626714, LOC666854, LOC100042394, Nsun7, Apbb2, Uchl1, LOC100041876, 3732412D22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193F07.bB6Ng01-193F07.g
ACCGA016332GA016333
length725622
definitionB6Ng01-193F07.b B6Ng01-193F07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,253,529 - 66,254,253)(66,142,071 - 66,142,692)
sequence
gaattctagaacatccagagcttcacagagagtctctgtaaaaaaaaaaa
aaaaaactcagctgtacacggagttcaccaccagcccagcaggagacagt
cggtgggttctctggatcactctgccttattaataatgagttgtgctgcc
agtattagtaacaatttaaaaatgaagggcatagcaaaagtcaagtaacc
gccacagagcagcacctgggccgggaggtactagaccctgtgctgttttc
tgacccctctgagtttcattatttgactaaaaacacaactgtacttgtcc
ctcctcgctgtgccagccaggtgtagagaccatctgccacaatgtaaccc
catggtcaaactgcctaaaccagccatttgactctcctgaagtattaaca
ccctcccccctcccctccccctccccttcccatgccccgccaccctaagt
cttgaatcactataaatgctactgaccaggatggtaacttgctcaaaata
tcggagtgccaagtaggcaaacagcagaaagaccttaaggcagacatgag
attggattagccaggccttaggtactttaaatgggattaaatggcacgtc
tctaatcccagcactctggaggcagaggcaggcaaatctctgagttctgg
tctacagagtgagttccaggacagtcagggctacacagagaaaccctgtc
agagagagggagagggagagggaga
gaattcattctgtagaccaggctggccccagactcagatatctgcctgcc
tctgcctctcacgtgctggaattaacagcatgcaccaccaccgcttagca
ataaagtcatgaagttcagttatgttctgattgaacacacatagtcttct
gtatgaggcttgctctccttttttttcccctttgaaagatttaaaactgt
ctctctctcccttcctggtccctttacatctctccttttacccagtctta
gaaagtttgaactggggttggagagatggctcagcggttaagagcactga
ctgctctcccagaggtcctgcgttcaactcccagcaaccacatggtggct
caaaccatctgtaatgggatccgatgcccttttctggtgtgtctgaagac
aatgacgatgtactcacttacataaaataaatcaataaatctttaaaaga
atgaatgaaacaaagtttgagctggataaaatcagaatgggagaatcagg
agtattgcctagtttaagaccaccttggcctacatggtgagtggtcaatc
ttggtctatagagtgaaagccctcttaaaaatgagatgaggaagaagagg
agagagaggagggggaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_66253529_66254253
seq2: B6Ng01-193F07.b_43_767 (reverse)

seq1  TCTCCCTCTCCCTCTCCCTCTCTCTGACAGGGTTTCTCTGTGTAGCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCCCTCTCCCTCTCTCTGACAGGGTTTCTCTGTGTAGCCCTG  50

seq1  ACTGTCCTGGAACTCACTCTGTAGACCAGAACTCAGAGATTTGCCTGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTGGAACTCACTCTGTAGACCAGAACTCAGAGATTTGCCTGCCT  100

seq1  CTGCCTCCAGAGTGCTGGGATTAGAGACGTGCCATTTAATCCCATTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCAGAGTGCTGGGATTAGAGACGTGCCATTTAATCCCATTTAAA  150

seq1  GTACCTAAGGCCTGGCTAATCCAATCTCATGTCTGCCTTAAGGTCTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTAAGGCCTGGCTAATCCAATCTCATGTCTGCCTTAAGGTCTTTCT  200

seq1  GCTGTTTGCCTACTTGGCACTCCGATATTTTGAGCAAGTTACCATCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTGCCTACTTGGCACTCCGATATTTTGAGCAAGTTACCATCCTGG  250

seq1  TCAGTAGCATTTATAGTGATTCAAGACTTAGGGTGGCGGGGCATGGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAGCATTTATAGTGATTCAAGACTTAGGGTGGCGGGGCATGGGAAG  300

seq1  GGGAGGGGGAGGGGAGGGGGGAGGGTGTTAATACTTCAGGAGAGTCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGGAGGGGAGGGGGGAGGGTGTTAATACTTCAGGAGAGTCAAAT  350

seq1  GGCTGGTTTAGGCAGTTTGACCATGGGGTTACATTGTGGCAGATGGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTTTAGGCAGTTTGACCATGGGGTTACATTGTGGCAGATGGTCTC  400

seq1  TACACCTGGCTGGCACAGCGAGGAGGGACAAGTACAGTTGTGTTTTTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTGGCTGGCACAGCGAGGAGGGACAAGTACAGTTGTGTTTTTAGT  450

seq1  CAAATAATGAAACTCAGAGGGGTCAGAAAACAGCACAGGGTCTAGTACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATGAAACTCAGAGGGGTCAGAAAACAGCACAGGGTCTAGTACCT  500

seq1  CCCGGCCCAGGTGCTGCTCTGTGGCGGTTACTTGACTTTTGCTATGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCCCAGGTGCTGCTCTGTGGCGGTTACTTGACTTTTGCTATGCCCT  550

seq1  TCATTTTTAAATTGTTACTAATACTGGCAGCACAACTCATTATTAATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTAAATTGTTACTAATACTGGCAGCACAACTCATTATTAATAAG  600

seq1  GCAGAGTGATCCAGAGAACCCACCGACTGTCTCCTGCTGGGCTGGTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTGATCCAGAGAACCCACCGACTGTCTCCTGCTGGGCTGGTGGTG  650

seq1  AACTCCGTGTACAGCTGAGTTTTTTTTTTTTTTTTTACAGAGACTCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCGTGTACAGCTGAGTTTTTTTTTTTTTTTTTACAGAGACTCTCTG  700

seq1  TGAAGCTCTGGATGTTCTAGAATTC  725
      |||||||||||||||||||||||||
seq2  TGAAGCTCTGGATGTTCTAGAATTC  725

seq1: chr5_66142071_66142692
seq2: B6Ng01-193F07.g_67_688

seq1  GAATTCATTCTGTAGACCAGGCTGGCCCCAGACTCAGATATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTGTAGACCAGGCTGGCCCCAGACTCAGATATCTGCCTGCC  50

seq1  TCTGCCTCTCACGTGCTGGAATTAACAGCATGCACCACCACCGCTTAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCTCACGTGCTGGAATTAACAGCATGCACCACCACCGCTTAGCA  100

seq1  ATAAAGTCATGAAGTTCAGTTATGTTCTGATTGAACACACATAGTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTCATGAAGTTCAGTTATGTTCTGATTGAACACACATAGTCTTCT  150

seq1  GTATGAGGCTTGCTCTCCTTTTTTTTCCCCTTTGAAAGATTTAAAACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGGCTTGCTCTCCTTTTTTTTCCCCTTTGAAAGATTTAAAACTGT  200

seq1  CTCTCTCTCCCTTCCTGGTCCCTTTACATCTCTCCTTTTACCCAGTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCCCTTCCTGGTCCCTTTACATCTCTCCTTTTACCCAGTCTTA  250

seq1  GAAAGTTTGAACTGGGGTTGGAGAGATGGCTCAGCGGTTAAGAGCACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTGAACTGGGGTTGGAGAGATGGCTCAGCGGTTAAGAGCACTGA  300

seq1  CTGCTCTCCCAGAGGTCCTGCGTTCAACTCCCAGCAACCACATGGTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCCCAGAGGTCCTGCGTTCAACTCCCAGCAACCACATGGTGGCT  350

seq1  CAAACCATCTGTAATGGGATCCGATGCCCTTTTCTGGTGTGTCTGAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATCTGTAATGGGATCCGATGCCCTTTTCTGGTGTGTCTGAAGAC  400

seq1  AATGACGATGTACTCACTTACATAAAATAAATCAATAAATCTTTAAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACGATGTACTCACTTACATAAAATAAATCAATAAATCTTTAAAAGA  450

seq1  ATGAATGAAACAAAGTTTGAGCTGGATAAAATCAGAATGGGAGAATCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGAAACAAAGTTTGAGCTGGATAAAATCAGAATGGGAGAATCAGG  500

seq1  AGTATTGCCTAGTTTAAGACCACCTTGGCCTACATGGTGAGTGGTCAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGCCTAGTTTAAGACCACCTTGGCCTACATGGTGAGTGGTCAATC  550

seq1  TTGGTCTATAGAGTGAAAGCCCTCTTAAAAATGAGATGAGGAAGAAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTATAGAGTGAAAGCCCTCTTAAAAATGAGATGAGGAAGAAGAGG  600

seq1  AGAGAGAGGAGGGGGAGGAGGA  622
      ||||||||||||||||||||||
seq2  AGAGAGAGGAGGGGGAGGAGGA  622